RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
LSM3P2-201ENST00000551246 SPATA8Q6RVD6 105 aa3.31□□□□□ -1.88
LSM3P2-201ENST00000551246 DEFB124Q8NES8 71 aa3.31□□□□□ -1.88
LSM3P2-201ENST00000551246 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
LSM3P2-201ENST00000551246 CEP290O15078 2479 aa3.31□□□□□ -1.88
LSM3P2-201ENST00000551246 NCOR1O75376 2440 aa3.31□□□□□ -1.88
LSM3P2-201ENST00000551246 PTPRZ1P23471 2315 aaPredicted RBP3.3□□□□□ -1.88
LSM3P2-201ENST00000551246 COL6A6A6NMZ7 2263 aa3.3□□□□□ -1.88
LSM3P2-201ENST00000551246 MSMBP08118 114 aa3.3□□□□□ -1.88
LSM3P2-201ENST00000551246 CLPSL2Q6UWE3 100 aa3.3□□□□□ -1.88
LSM3P2-201ENST00000551246 ADM2Q7Z4H4 148 aa3.3□□□□□ -1.88
LSM3P2-201ENST00000551246 PRO0255Q9UI72 69 aa3.3□□□□□ -1.88
LSM3P2-201ENST00000551246 MYO15AQ9UKN7 3530 aa3.3□□□□□ -1.88
LSM3P2-201ENST00000551246 SMG1Q96Q15 3661 aaKnown RBP3.3□□□□□ -1.88
LSM3P2-201ENST00000551246 DMDP11532 3685 aa3.29□□□□□ -1.88
LSM3P2-201ENST00000551246 DEFB131BA0A096LNP1 70 aa3.29□□□□□ -1.88
LSM3P2-201ENST00000551246 HRES1P13985 223 aa3.29□□□□□ -1.88
LSM3P2-201ENST00000551246 DEFB136Q30KP8 78 aa3.29□□□□□ -1.88
LSM3P2-201ENST00000551246 Q6ZR54 194 aa3.29□□□□□ -1.88
LSM3P2-201ENST00000551246 Q6ZRX8 168 aa3.29□□□□□ -1.88
LSM3P2-201ENST00000551246 ALMS1Q8TCU4 4167 aa3.29□□□□□ -1.88
LSM3P2-201ENST00000551246 TRIOBPQ9H2D6 2365 aa3.29□□□□□ -1.88
LSM3P2-201ENST00000551246 ZDBF2Q9HCK1 2354 aa3.29□□□□□ -1.88
LSM3P2-201ENST00000551246 C2CD3Q4AC94 2353 aa3.28□□□□□ -1.88
LSM3P2-201ENST00000551246 IGLV10-54A0A075B6I4 117 aa3.28□□□□□ -1.88
LSM3P2-201ENST00000551246 LINC00472Q9H8W2 130 aa3.28□□□□□ -1.88
LSM3P2-201ENST00000551246 SPENQ96T58 3664 aaKnown RBP3.28□□□□□ -1.89
LSM3P2-201ENST00000551246 WDFY4Q6ZS81 3184 aa3.27□□□□□ -1.89
LSM3P2-201ENST00000551246 IGLV5-52A0A0A0MRZ9 124 aa3.27□□□□□ -1.89
LSM3P2-201ENST00000551246 IGLV1-51P01701 117 aa3.27□□□□□ -1.89
LSM3P2-201ENST00000551246 PRB2P02812 416 aaPredicted RBP3.27□□□□□ -1.89
LSM3P2-201ENST00000551246 ANGP03950 147 aaKnown RBP3.27□□□□□ -1.89
LSM3P2-201ENST00000551246 TLX1NBP0CAT3 122 aa3.27□□□□□ -1.89
LSM3P2-201ENST00000551246 LELP1Q5T871 98 aa3.27□□□□□ -1.89
LSM3P2-201ENST00000551246 WFDC13Q8IUB5 93 aa3.27□□□□□ -1.89
LSM3P2-201ENST00000551246 MGAQ8IWI9 3026 aa3.26□□□□□ -1.89
LSM3P2-201ENST00000551246 MMP24-AS1A0A0U1RRL7 71 aa3.26□□□□□ -1.89
LSM3P2-201ENST00000551246 A8MWP4 228 aa3.26□□□□□ -1.89
LSM3P2-201ENST00000551246 B4DSR2 109 aa3.26□□□□□ -1.89
LSM3P2-201ENST00000551246 SPAG11AQ6PDA7 123 aa3.26□□□□□ -1.89
LSM3P2-201ENST00000551246 IGFL1Q6UW32 110 aa3.26□□□□□ -1.89
LSM3P2-201ENST00000551246 KRTAP9-8Q9BYQ0 159 aa3.26□□□□□ -1.89
LSM3P2-201ENST00000551246 AKAP6Q13023 2319 aa3.26□□□□□ -1.89
LSM3P2-201ENST00000551246 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.26□□□□□ -1.89
LSM3P2-201ENST00000551246 IGKV2D-30A0A075B6S6 120 aa3.25□□□□□ -1.89
LSM3P2-201ENST00000551246 KRTAP1-1Q07627 177 aa3.25□□□□□ -1.89
LSM3P2-201ENST00000551246 C15orf56Q8N910 161 aa3.25□□□□□ -1.89
LSM3P2-201ENST00000551246 CREBBPQ92793 2442 aa3.25□□□□□ -1.89
LSM3P2-201ENST00000551246 RPL37AP8A6NKH3 93 aa3.24□□□□□ -1.89
LSM3P2-201ENST00000551246 H0Y9J4 135 aa3.24□□□□□ -1.89
LSM3P2-201ENST00000551246 SPRR1BP22528 89 aa3.24□□□□□ -1.89
LSM3P2-201ENST00000551246 DEFB116Q30KQ4 102 aa3.24□□□□□ -1.89
LSM3P2-201ENST00000551246 KRTAP7-1Q8IUC3 87 aa3.24□□□□□ -1.89
LSM3P2-201ENST00000551246 DEFB105AQ8NG35 78 aa3.24□□□□□ -1.89
LSM3P2-201ENST00000551246 TP53AIP1Q9HCN2 124 aa3.24□□□□□ -1.89
LSM3P2-201ENST00000551246 PIEZO2Q9H5I5 2752 aa3.24□□□□□ -1.89
LSM3P2-201ENST00000551246 DMXL2Q8TDJ6 3036 aa3.23□□□□□ -1.89
LSM3P2-201ENST00000551246 CELSR3Q9NYQ7 3312 aa3.23□□□□□ -1.89
LSM3P2-201ENST00000551246 CSMD1Q96PZ7 3565 aa3.23□□□□□ -1.89
LSM3P2-201ENST00000551246 CAMK2N2Q96S95 79 aa3.23□□□□□ -1.89
LSM3P2-201ENST00000551246 PRRC2CQ9Y520 2896 aaKnown RBP3.23□□□□□ -1.89
LSM3P2-201ENST00000551246 AKAP13Q12802 2813 aa3.23□□□□□ -1.89
LSM3P2-201ENST00000551246 IGKV2-24A0A0C4DH68 120 aa3.22□□□□□ -1.89
LSM3P2-201ENST00000551246 DEFB130BP0DP73 79 aa3.22□□□□□ -1.89
LSM3P2-201ENST00000551246 DEFB130AP0DP74 79 aa3.22□□□□□ -1.89
LSM3P2-201ENST00000551246 RPL37AP61513 92 aaKnown RBP3.22□□□□□ -1.89
LSM3P2-201ENST00000551246 KRTAP13-3Q3SY46 172 aa3.22□□□□□ -1.89
LSM3P2-201ENST00000551246 WFDC10BQ8IUB3 73 aa3.22□□□□□ -1.89
LSM3P2-201ENST00000551246 RETNLBQ9BQ08 111 aa3.22□□□□□ -1.89
LSM3P2-201ENST00000551246 SPTAN1Q13813 2472 aaKnown RBP3.22□□□□□ -1.89
LSM3P2-201ENST00000551246 DCHS1Q96JQ0 3298 aa3.21□□□□□ -1.9
LSM3P2-201ENST00000551246 HRNRQ86YZ3 2850 aaPredicted RBP3.21□□□□□ -1.9
LSM3P2-201ENST00000551246 TACC2O95359 2948 aa3.21□□□□□ -1.9
LSM3P2-201ENST00000551246 ZFHX4Q86UP3 3567 aa3.2□□□□□ -1.9
LSM3P2-201ENST00000551246 NOTCH3Q9UM47 2321 aa3.2□□□□□ -1.9
LSM3P2-201ENST00000551246 A0A087WSZ3 146 aa3.2□□□□□ -1.9
LSM3P2-201ENST00000551246 A0A096LPF7 62 aa3.2□□□□□ -1.9
LSM3P2-201ENST00000551246 ZNF861PO60384 105 aa3.2□□□□□ -1.9
LSM3P2-201ENST00000551246 DCHS2Q6V1P9 2916 aa3.2□□□□□ -1.9
LSM3P2-201ENST00000551246 SPTA1P02549 2419 aa3.19□□□□□ -1.9
LSM3P2-201ENST00000551246 FAM168BA1KXE4 195 aa3.19□□□□□ -1.9
LSM3P2-201ENST00000551246 SEC61BP60468 96 aaKnown RBP3.19□□□□□ -1.9
LSM3P2-201ENST00000551246 CSAG1Q6PB30 78 aa3.19□□□□□ -1.9
LSM3P2-201ENST00000551246 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
LSM3P2-201ENST00000551246 KRTAP1-5Q9BYS1 174 aa3.19□□□□□ -1.9
LSM3P2-201ENST00000551246 BSNQ9UPA5 3926 aa3.19□□□□□ -1.9
LSM3P2-201ENST00000551246 OTOGLQ3ZCN5 2332 aa3.18□□□□□ -1.9
LSM3P2-201ENST00000551246 A0A0G2JQZ4 141 aa3.18□□□□□ -1.9
LSM3P2-201ENST00000551246 A0A1W2PNN7 141 aa3.18□□□□□ -1.9
LSM3P2-201ENST00000551246 PCOTHQ58A44 107 aa3.18□□□□□ -1.9
LSM3P2-201ENST00000551246 Q96NJ1 140 aa3.18□□□□□ -1.9
LSM3P2-201ENST00000551246 H3BNG1 76 aa3.17□□□□□ -1.9
LSM3P2-201ENST00000551246 IGHV6-1A0A0B4J1U7 121 aa3.16□□□□□ -1.9
LSM3P2-201ENST00000551246 ROMO1P60602 79 aa3.16□□□□□ -1.9
LSM3P2-201ENST00000551246 DMAC1Q96GE9 116 aa3.16□□□□□ -1.9
LSM3P2-201ENST00000551246 CCL19Q99731 98 aa3.16□□□□□ -1.9
LSM3P2-201ENST00000551246 C8orf17Q9NRJ1 99 aa3.16□□□□□ -1.9
LSM3P2-201ENST00000551246 ADGRG4Q8IZF6 3080 aa3.16□□□□□ -1.9
LSM3P2-201ENST00000551246 MIR22HGQ0VDD5 57 aa3.15□□□□□ -1.91
LSM3P2-201ENST00000551246 C1orf134Q5TEV5 83 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms