RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 NBDYA0A0U1RRE5 68 aa10.78□□□□□ -0.68
CHMP1A-204ENST00000547687 Q6ZRP5 223 aa10.78□□□□□ -0.68
CHMP1A-204ENST00000547687 KIAA1109Q2LD37 5005 aa10.77□□□□□ -0.68
CHMP1A-204ENST00000547687 LINC00575Q6W349 94 aa10.77□□□□□ -0.68
CHMP1A-204ENST00000547687 USP17L23D6RBM5 183 aa10.77□□□□□ -0.69
CHMP1A-204ENST00000547687 ACYP1P07311 99 aa10.77□□□□□ -0.69
CHMP1A-204ENST00000547687 C1orf134Q5TEV5 83 aa10.77□□□□□ -0.69
CHMP1A-204ENST00000547687 TRAV23DV6A0A075B6W5 121 aa10.76□□□□□ -0.69
CHMP1A-204ENST00000547687 C9orf129Q5T035 196 aaKnown RBP10.76□□□□□ -0.69
CHMP1A-204ENST00000547687 M0R378 163 aa10.75□□□□□ -0.69
CHMP1A-204ENST00000547687 LINC00336Q6ZUF6 198 aa10.75□□□□□ -0.69
CHMP1A-204ENST00000547687 OBSCN-AS1Q96MR7 158 aa10.75□□□□□ -0.69
CHMP1A-204ENST00000547687 A0A1B0GVY2 172 aa10.75□□□□□ -0.69
CHMP1A-204ENST00000547687 hADV29S1A0JD25 119 aa10.74□□□□□ -0.69
CHMP1A-204ENST00000547687 DYNC1H1Q14204 4646 aaKnown RBP10.73□□□□□ -0.69
CHMP1A-204ENST00000547687 TMEM256-PLSCR3K7ERE1 68 aa10.73□□□□□ -0.69
CHMP1A-204ENST00000547687 TTC32Q5I0X7 151 aa10.73□□□□□ -0.69
CHMP1A-204ENST00000547687 DIRC1Q969H9 104 aa10.73□□□□□ -0.69
CHMP1A-204ENST00000547687 GAGE2BQ13066 116 aa10.72□□□□□ -0.69
CHMP1A-204ENST00000547687 ZNF73O43830 326 aaPredicted RBP10.72□□□□□ -0.69
CHMP1A-204ENST00000547687 C14orf132Q9NPU4 83 aa10.72□□□□□ -0.69
CHMP1A-204ENST00000547687 PSCAO43653 123 aa10.71□□□□□ -0.69
CHMP1A-204ENST00000547687 TLX1NBP0CAT3 122 aa10.71□□□□□ -0.69
CHMP1A-204ENST00000547687 TNP2Q05952 138 aa10.71□□□□□ -0.69
CHMP1A-204ENST00000547687 GAGE2AQ6NT46 116 aa10.71□□□□□ -0.69
CHMP1A-204ENST00000547687 HERC2O95714 4834 aa10.69□□□□□ -0.7
CHMP1A-204ENST00000547687 COX7BP24311 80 aa10.68□□□□□ -0.7
CHMP1A-204ENST00000547687 TRBV7-6A0A0J9YX20 115 aa10.68□□□□□ -0.7
CHMP1A-204ENST00000547687 JMJD7-PLA2G4BH0Y9G9 81 aa10.67□□□□□ -0.7
CHMP1A-204ENST00000547687 NKAPP1Q8N9T2 125 aa10.67□□□□□ -0.7
CHMP1A-204ENST00000547687 ELOF1P60002 83 aaKnown RBP10.66□□□□□ -0.7
CHMP1A-204ENST00000547687 SERTAD4-AS1Q5TG53 156 aa10.66□□□□□ -0.7
CHMP1A-204ENST00000547687 DNAH5Q8TE73 4624 aa10.65□□□□□ -0.7
CHMP1A-204ENST00000547687 SMCR5Q8TEV8 140 aa10.65□□□□□ -0.71
CHMP1A-204ENST00000547687 PLA2G2DQ9UNK4 145 aa10.65□□□□□ -0.71
CHMP1A-204ENST00000547687 SDIM1Q6ZPB5 146 aa10.64□□□□□ -0.71
CHMP1A-204ENST00000547687 Q6ZQY7 126 aa10.64□□□□□ -0.71
CHMP1A-204ENST00000547687 Q6ZRN7 208 aaPredicted RBP10.64□□□□□ -0.71
CHMP1A-204ENST00000547687 LRP1BQ9NZR2 4599 aa10.64□□□□□ -0.71
CHMP1A-204ENST00000547687 H3BQ85 93 aa10.63□□□□□ -0.71
CHMP1A-204ENST00000547687 C7orf33Q8WU49 177 aa10.63□□□□□ -0.71
CHMP1A-204ENST00000547687 LINC00643Q86TS7 51 aa10.62□□□□□ -0.71
CHMP1A-204ENST00000547687 CCKP06307 115 aa10.62□□□□□ -0.71
CHMP1A-204ENST00000547687 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.62□□□□□ -0.71
CHMP1A-204ENST00000547687 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
CHMP1A-204ENST00000547687 KCNQ1DNQ9H478 68 aa10.61□□□□□ -0.71
CHMP1A-204ENST00000547687 LRCOL1A6NCL2 159 aa10.6□□□□□ -0.71
CHMP1A-204ENST00000547687 J3KT08 172 aa10.6□□□□□ -0.71
CHMP1A-204ENST00000547687 RPS28P62857 69 aaKnown RBP10.6□□□□□ -0.71
CHMP1A-204ENST00000547687 LINC00528Q8N1L1 170 aa10.6□□□□□ -0.71
CHMP1A-204ENST00000547687 RYR1P21817 5038 aa10.6□□□□□ -0.71
CHMP1A-204ENST00000547687 IGLV5-37A0A075B6J1 123 aa10.6□□□□□ -0.71
CHMP1A-204ENST00000547687 FAM168BA1KXE4 195 aa10.6□□□□□ -0.71
CHMP1A-204ENST00000547687 LAMTOR3Q9UHA4 124 aa10.6□□□□□ -0.71
CHMP1A-204ENST00000547687 FUSP35637 526 aaKnown RBP eCLIP10.59□□□□□ -0.71
CHMP1A-204ENST00000547687 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.58□□□□□ -0.72
CHMP1A-204ENST00000547687 TRBV7-7A0A0K0K1E9 115 aa10.58□□□□□ -0.72
CHMP1A-204ENST00000547687 GHRHP01286 108 aa10.58□□□□□ -0.72
CHMP1A-204ENST00000547687 RBM3P98179 157 aaKnown RBP10.58□□□□□ -0.72
CHMP1A-204ENST00000547687 C14orf177Q52M58 125 aa10.58□□□□□ -0.72
CHMP1A-204ENST00000547687 CNBPP62633 177 aaKnown RBP10.57□□□□□ -0.72
CHMP1A-204ENST00000547687 LINC00846Q9NV44 126 aa10.57□□□□□ -0.72
CHMP1A-204ENST00000547687 HSPG2P98160 4391 aa10.57□□□□□ -0.72
CHMP1A-204ENST00000547687 KRTAP10-2P60368 255 aa10.57□□□□□ -0.72
CHMP1A-204ENST00000547687 FAM19A5Q7Z5A7 132 aaPredicted RBP10.57□□□□□ -0.72
CHMP1A-204ENST00000547687 PCLOQ9Y6V0 5065 aa10.57□□□□□ -0.72
CHMP1A-204ENST00000547687 C16orf90A8MZG2 172 aa10.56□□□□□ -0.72
CHMP1A-204ENST00000547687 KRTAP7-1Q8IUC3 87 aa10.56□□□□□ -0.72
CHMP1A-204ENST00000547687 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
CHMP1A-204ENST00000547687 IGLV1-50A0A075B6I6 118 aa10.55□□□□□ -0.72
CHMP1A-204ENST00000547687 IMUPQ9GZP8 106 aa10.55□□□□□ -0.72
CHMP1A-204ENST00000547687 APOBP04114 4563 aaKnown RBP10.54□□□□□ -0.72
CHMP1A-204ENST00000547687 PRYO14603 147 aa10.53□□□□□ -0.72
CHMP1A-204ENST00000547687 LOC110117498A0A087WWA1 95 aa10.52□□□□□ -0.73
CHMP1A-204ENST00000547687 Q6ZQT0 140 aa10.52□□□□□ -0.73
CHMP1A-204ENST00000547687 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
CHMP1A-204ENST00000547687 DSCR8Q96T75 97 aa10.51□□□□□ -0.73
CHMP1A-204ENST00000547687 A0A087WTM6 91 aa10.5□□□□□ -0.73
CHMP1A-204ENST00000547687 KRTAP4-16G5E9R7 235 aaPredicted RBP10.49□□□□□ -0.73
CHMP1A-204ENST00000547687 SPRR1AP35321 89 aa10.49□□□□□ -0.73
CHMP1A-204ENST00000547687 ABCA13Q86UQ4 5058 aa10.49□□□□□ -0.73
CHMP1A-204ENST00000547687 A0A096LNI7 61 aa10.48□□□□□ -0.73
CHMP1A-204ENST00000547687 PDE6GP18545 87 aa10.48□□□□□ -0.73
CHMP1A-204ENST00000547687 ETDCA0A1B0GVM5 59 aa10.48□□□□□ -0.73
CHMP1A-204ENST00000547687 Q6JHZ5 121 aa10.48□□□□□ -0.73
CHMP1A-204ENST00000547687 Q6ZRX8 168 aa10.48□□□□□ -0.73
CHMP1A-204ENST00000547687 C9orf163Q8N9P6 203 aa10.48□□□□□ -0.73
CHMP1A-204ENST00000547687 KRTAP17-1Q9BYP8 105 aa10.47□□□□□ -0.73
CHMP1A-204ENST00000547687 DHRS4-AS1Q9P1J3 65 aa10.47□□□□□ -0.73
CHMP1A-204ENST00000547687 IGKV2-24A0A0C4DH68 120 aa10.46□□□□□ -0.73
CHMP1A-204ENST00000547687 IGKV3D-7A0A0C4DH55 119 aa10.46□□□□□ -0.74
CHMP1A-204ENST00000547687 C3orf22Q8N5N4 141 aa10.46□□□□□ -0.74
CHMP1A-204ENST00000547687 UQCRQO14949 82 aa10.45□□□□□ -0.74
CHMP1A-204ENST00000547687 TRBV7-4A0A0J9YYF1 115 aa10.44□□□□□ -0.74
CHMP1A-204ENST00000547687 DEFB105AQ8NG35 78 aa10.44□□□□□ -0.74
CHMP1A-204ENST00000547687 Q9BRP9 147 aa10.44□□□□□ -0.74
CHMP1A-204ENST00000547687 A0A1W2PNN7 141 aa10.43□□□□□ -0.74
CHMP1A-204ENST00000547687 UBL5Q9BZL1 73 aa10.43□□□□□ -0.74
CHMP1A-204ENST00000547687 C9orf153Q5TBE3 101 aa10.43□□□□□ -0.74
CHMP1A-204ENST00000547687 REG3GQ6UW15 175 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms