RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 LINC00528Q8N1L1 170 aa10.53□□□□□ -0.72
CADM1-220ENST00000546000 TMEM126AQ9H061 195 aa10.53□□□□□ -0.72
CADM1-220ENST00000546000 PRO1854Q9UHT4 67 aa10.53□□□□□ -0.72
CADM1-220ENST00000546000 PRYO14603 147 aa10.52□□□□□ -0.73
CADM1-220ENST00000546000 NAA38Q9BRA0 125 aaKnown RBP10.52□□□□□ -0.73
CADM1-220ENST00000546000 KCNQ1DNQ9H478 68 aa10.52□□□□□ -0.73
CADM1-220ENST00000546000 TSPAN13O95857 204 aa10.51□□□□□ -0.73
CADM1-220ENST00000546000 Q1RN00 199 aa10.51□□□□□ -0.73
CADM1-220ENST00000546000 REG3GQ6UW15 175 aa10.5□□□□□ -0.73
CADM1-220ENST00000546000 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
CADM1-220ENST00000546000 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
CADM1-220ENST00000546000 ZNF73O43830 326 aaPredicted RBP10.48□□□□□ -0.73
CADM1-220ENST00000546000 C1orf137Q5JT78 98 aa10.48□□□□□ -0.73
CADM1-220ENST00000546000 SPRR1AP35321 89 aa10.47□□□□□ -0.73
CADM1-220ENST00000546000 RPL37AP61513 92 aaKnown RBP10.47□□□□□ -0.73
CADM1-220ENST00000546000 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
CADM1-220ENST00000546000 KRTAP4-16G5E9R7 235 aaPredicted RBP10.46□□□□□ -0.73
CADM1-220ENST00000546000 TRIAP1O43715 76 aa10.46□□□□□ -0.73
CADM1-220ENST00000546000 PRLHP81277 87 aa10.46□□□□□ -0.73
CADM1-220ENST00000546000 ABCA13Q86UQ4 5058 aa10.45□□□□□ -0.74
CADM1-220ENST00000546000 TAX1BP3O14907 124 aa10.45□□□□□ -0.74
CADM1-220ENST00000546000 BCE1O60756 84 aa10.45□□□□□ -0.74
CADM1-220ENST00000546000 FAM19A1Q7Z5A9 133 aa10.45□□□□□ -0.74
CADM1-220ENST00000546000 ETDCA0A1B0GVM5 59 aa10.44□□□□□ -0.74
CADM1-220ENST00000546000 RPL28P46779 137 aaKnown RBP10.44□□□□□ -0.74
CADM1-220ENST00000546000 B5MCH6 92 aa10.43□□□□□ -0.74
CADM1-220ENST00000546000 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
CADM1-220ENST00000546000 PSMB2P49721 201 aa10.42□□□□□ -0.74
CADM1-220ENST00000546000 COX7BP24311 80 aa10.41□□□□□ -0.74
CADM1-220ENST00000546000 UBE2AP49459 152 aa10.41□□□□□ -0.74
CADM1-220ENST00000546000 COL5A1-AS1Q5SY13 56 aa10.41□□□□□ -0.74
CADM1-220ENST00000546000 Q5VSD8 79 aa10.41□□□□□ -0.74
CADM1-220ENST00000546000 KRTAP13-1Q8IUC0 172 aa10.41□□□□□ -0.74
CADM1-220ENST00000546000 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
CADM1-220ENST00000546000 ELOF1P60002 83 aaKnown RBP10.4□□□□□ -0.74
CADM1-220ENST00000546000 CBY1Q9Y3M2 126 aa10.4□□□□□ -0.74
CADM1-220ENST00000546000 PKHD1L1Q86WI1 4243 aa10.4□□□□□ -0.74
CADM1-220ENST00000546000 H3BUT2 72 aa10.39□□□□□ -0.75
CADM1-220ENST00000546000 Q6ZRX8 168 aa10.39□□□□□ -0.75
CADM1-220ENST00000546000 Q9BRP9 147 aa10.39□□□□□ -0.75
CADM1-220ENST00000546000 CLEC2BQ92478 149 aa10.38□□□□□ -0.75
CADM1-220ENST00000546000 FAM218AQ96MZ4 157 aa10.38□□□□□ -0.75
CADM1-220ENST00000546000 C9orf118A6NHY6 69 aa10.37□□□□□ -0.75
CADM1-220ENST00000546000 ERC2-IT1O76042 136 aa10.37□□□□□ -0.75
CADM1-220ENST00000546000 SMCR5Q8TEV8 140 aa10.37□□□□□ -0.75
CADM1-220ENST00000546000 HIGD2AQ9BW72 106 aa10.37□□□□□ -0.75
CADM1-220ENST00000546000 FAM229AH3BQW9 127 aa10.35□□□□□ -0.75
CADM1-220ENST00000546000 KRTAP4-5Q9BYR2 181 aa10.35□□□□□ -0.75
CADM1-220ENST00000546000 TRBV7-6A0A0J9YX20 115 aa10.34□□□□□ -0.75
CADM1-220ENST00000546000 ZNF861PO60384 105 aa10.34□□□□□ -0.75
CADM1-220ENST00000546000 Q8N1X5 172 aa10.34□□□□□ -0.75
CADM1-220ENST00000546000 VAMP3Q15836 100 aa10.33□□□□□ -0.76
CADM1-220ENST00000546000 LINC00575Q6W349 94 aa10.33□□□□□ -0.76
CADM1-220ENST00000546000 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
CADM1-220ENST00000546000 A0A1W2PPM0 123 aa10.31□□□□□ -0.76
CADM1-220ENST00000546000 H0Y9J4 135 aa10.31□□□□□ -0.76
CADM1-220ENST00000546000 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
CADM1-220ENST00000546000 ST20-AS1Q8NBB2 130 aa10.3□□□□□ -0.76
CADM1-220ENST00000546000 TCL1BO95988 128 aa10.29□□□□□ -0.76
CADM1-220ENST00000546000 COX6CP09669 75 aa10.29□□□□□ -0.76
CADM1-220ENST00000546000 SRRM2Q9UQ35 2752 aaKnown RBP10.28□□□□□ -0.76
CADM1-220ENST00000546000 H0YGX0 51 aa10.28□□□□□ -0.76
CADM1-220ENST00000546000 DHRS4-AS1Q9P1J3 65 aa10.28□□□□□ -0.76
CADM1-220ENST00000546000 hADV29S1A0JD25 119 aa10.27□□□□□ -0.77
CADM1-220ENST00000546000 LST1O00453 97 aa10.26□□□□□ -0.77
CADM1-220ENST00000546000 SLC25A20O43772 301 aa10.25□□□□□ -0.77
CADM1-220ENST00000546000 FABP2P12104 132 aa10.25□□□□□ -0.77
CADM1-220ENST00000546000 INAFM2P0DMQ5 153 aa10.24□□□□□ -0.77
CADM1-220ENST00000546000 Q6ZQY7 126 aa10.24□□□□□ -0.77
CADM1-220ENST00000546000 ANAPC11Q9NYG5 84 aa10.24□□□□□ -0.77
CADM1-220ENST00000546000 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
CADM1-220ENST00000546000 SPINK6Q6UWN8 80 aa10.23□□□□□ -0.77
CADM1-220ENST00000546000 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
CADM1-220ENST00000546000 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
CADM1-220ENST00000546000 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
CADM1-220ENST00000546000 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
CADM1-220ENST00000546000 LINC01547P58512 204 aaPredicted RBP10.21□□□□□ -0.77
CADM1-220ENST00000546000 ATXN8Q156A1 80 aa10.21□□□□□ -0.77
CADM1-220ENST00000546000 GAGE2AQ6NT46 116 aa10.2□□□□□ -0.78
CADM1-220ENST00000546000 KRTAP1-4P0C5Y4 121 aa10.19□□□□□ -0.78
CADM1-220ENST00000546000 MTURNQ8N3F0 131 aa10.19□□□□□ -0.78
CADM1-220ENST00000546000 A0A1B0GX51 115 aa10.18□□□□□ -0.78
CADM1-220ENST00000546000 TRACP01848 142 aa10.18□□□□□ -0.78
CADM1-220ENST00000546000 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.18□□□□□ -0.78
CADM1-220ENST00000546000 A0A1B0GV90 55 aa10.17□□□□□ -0.78
CADM1-220ENST00000546000 H3BMG7 143 aa10.17□□□□□ -0.78
CADM1-220ENST00000546000 K7EP34 96 aa10.17□□□□□ -0.78
CADM1-220ENST00000546000 DNAL4O96015 105 aa10.17□□□□□ -0.78
CADM1-220ENST00000546000 Q8N377 158 aa10.17□□□□□ -0.78
CADM1-220ENST00000546000 IGLV5-48A0A075B6I7 105 aa10.16□□□□□ -0.78
CADM1-220ENST00000546000 TRBV20-1A0A075B6N2 111 aa10.16□□□□□ -0.78
CADM1-220ENST00000546000 C3orf22Q8N5N4 141 aa10.16□□□□□ -0.78
CADM1-220ENST00000546000 FAT3Q8TDW7 4589 aa10.16□□□□□ -0.78
CADM1-220ENST00000546000 ZNF706Q9Y5V0 76 aaPredicted RBP10.15□□□□□ -0.78
CADM1-220ENST00000546000 HERC1Q15751 4861 aa10.15□□□□□ -0.78
CADM1-220ENST00000546000 C9JAW5 83 aa10.14□□□□□ -0.79
CADM1-220ENST00000546000 LINC00483Q53H64 154 aa10.14□□□□□ -0.79
CADM1-220ENST00000546000 LRP1Q07954 4544 aaKnown RBP10.14□□□□□ -0.79
CADM1-220ENST00000546000 A0A087X002 238 aa10.12□□□□□ -0.79
CADM1-220ENST00000546000 SNCGO76070 127 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms