RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 ANKRD39Q53RE8 183 aa7.8□□□□□ -1.16
DDX55-213ENST00000545042 SMCR5Q8TEV8 140 aa7.8□□□□□ -1.16
DDX55-213ENST00000545042 SPRR4Q96PI1 79 aa7.8□□□□□ -1.16
DDX55-213ENST00000545042 B5MCH6 92 aa7.79□□□□□ -1.16
DDX55-213ENST00000545042 TSPAN13O95857 204 aa7.79□□□□□ -1.16
DDX55-213ENST00000545042 OR13C6PQ8NH95 151 aa7.79□□□□□ -1.16
DDX55-213ENST00000545042 COPS9Q8WXC6 57 aa7.79□□□□□ -1.16
DDX55-213ENST00000545042 HIST1H2BLQ99880 126 aa7.79□□□□□ -1.16
DDX55-213ENST00000545042 HINT1P49773 126 aaPredicted RBP7.78□□□□□ -1.16
DDX55-213ENST00000545042 JOSD1Q15040 202 aaPredicted RBP7.78□□□□□ -1.16
DDX55-213ENST00000545042 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
DDX55-213ENST00000545042 HSBP1L1C9JCN9 74 aa7.77□□□□□ -1.17
DDX55-213ENST00000545042 ZNF73O43830 326 aaPredicted RBP7.77□□□□□ -1.17
DDX55-213ENST00000545042 Q6ZRX8 168 aa7.77□□□□□ -1.17
DDX55-213ENST00000545042 LINC00518Q8N0U6 118 aa7.77□□□□□ -1.17
DDX55-213ENST00000545042 SPANXDQ9BXN6 97 aa7.77□□□□□ -1.17
DDX55-213ENST00000545042 PRR4Q16378 134 aa7.76□□□□□ -1.17
DDX55-213ENST00000545042 IFITM1P13164 125 aa7.75□□□□□ -1.17
DDX55-213ENST00000545042 Q6ZVH6 145 aa7.75□□□□□ -1.17
DDX55-213ENST00000545042 PCP2Q8IVA1 136 aa7.75□□□□□ -1.17
DDX55-213ENST00000545042 C3orf22Q8N5N4 141 aa7.75□□□□□ -1.17
DDX55-213ENST00000545042 GAGE2AQ6NT46 116 aa7.74□□□□□ -1.17
DDX55-213ENST00000545042 PPDPFQ9H3Y8 114 aa7.74□□□□□ -1.17
DDX55-213ENST00000545042 LRP2P98164 4655 aa7.73□□□□□ -1.17
DDX55-213ENST00000545042 CTAG1AP78358 180 aa7.73□□□□□ -1.17
DDX55-213ENST00000545042 Q9BRP9 147 aa7.73□□□□□ -1.17
DDX55-213ENST00000545042 ERC2-IT1O76042 136 aa7.72□□□□□ -1.17
DDX55-213ENST00000545042 LINC00483Q53H64 154 aa7.72□□□□□ -1.17
DDX55-213ENST00000545042 C4orf48Q5BLP8 95 aa7.72□□□□□ -1.17
DDX55-213ENST00000545042 SPAG11AQ6PDA7 123 aa7.72□□□□□ -1.17
DDX55-213ENST00000545042 SCGB1D1O95968 90 aa7.7□□□□□ -1.18
DDX55-213ENST00000545042 MUSTN1Q8IVN3 82 aa7.7□□□□□ -1.18
DDX55-213ENST00000545042 C5orf52A6NGY3 159 aa7.69□□□□□ -1.18
DDX55-213ENST00000545042 DHRS4-AS1Q9P1J3 65 aa7.69□□□□□ -1.18
DDX55-213ENST00000545042 A6NDN8 102 aa7.68□□□□□ -1.18
DDX55-213ENST00000545042 Q8NBF4 154 aa7.68□□□□□ -1.18
DDX55-213ENST00000545042 IGLV9-49A0A0B4J1Y8 123 aa7.67□□□□□ -1.18
DDX55-213ENST00000545042 COX7BP24311 80 aa7.67□□□□□ -1.18
DDX55-213ENST00000545042 C6orf99Q4VX62 202 aa7.67□□□□□ -1.18
DDX55-213ENST00000545042 TRAV13-2A0A0B4J235 113 aa7.66□□□□□ -1.18
DDX55-213ENST00000545042 MOBPQ13875 183 aa7.66□□□□□ -1.18
DDX55-213ENST00000545042 TRBV7-6A0A0J9YX20 115 aa7.65□□□□□ -1.18
DDX55-213ENST00000545042 ELOF1P60002 83 aaKnown RBP7.65□□□□□ -1.18
DDX55-213ENST00000545042 SSBP3-AS1Q7Z2R9 100 aa7.65□□□□□ -1.18
DDX55-213ENST00000545042 RETNLBQ9BQ08 111 aa7.65□□□□□ -1.18
DDX55-213ENST00000545042 SLC25A34Q6PIV7 304 aa7.64□□□□□ -1.19
DDX55-213ENST00000545042 ST20-AS1Q8NBB2 130 aa7.64□□□□□ -1.19
DDX55-213ENST00000545042 LPAP08519 4548 aa7.63□□□□□ -1.19
DDX55-213ENST00000545042 A0A1B0GWB2 263 aa7.63□□□□□ -1.19
DDX55-213ENST00000545042 SPINK1P00995 79 aa7.63□□□□□ -1.19
DDX55-213ENST00000545042 C9orf153Q5TBE3 101 aa7.63□□□□□ -1.19
DDX55-213ENST00000545042 A4D1N5 150 aa7.61□□□□□ -1.19
DDX55-213ENST00000545042 IGLV7-46A0A075B6I9 117 aa7.6□□□□□ -1.19
DDX55-213ENST00000545042 COX8AP10176 69 aa7.6□□□□□ -1.19
DDX55-213ENST00000545042 TAL2Q16559 108 aa7.6□□□□□ -1.19
DDX55-213ENST00000545042 HIST1H4GQ99525 98 aa7.6□□□□□ -1.19
DDX55-213ENST00000545042 LAMTOR3Q9UHA4 124 aa7.6□□□□□ -1.19
DDX55-213ENST00000545042 RNF213Q63HN8 5207 aa7.6□□□□□ -1.19
DDX55-213ENST00000545042 SPRR1BP22528 89 aa7.59□□□□□ -1.19
DDX55-213ENST00000545042 SMIM11BQ8TCY0 68 aa7.59□□□□□ -1.19
DDX55-213ENST00000545042 NHP2Q9NX24 153 aaKnown RBP7.59□□□□□ -1.19
DDX55-213ENST00000545042 DLEU1O43261 78 aa7.58□□□□□ -1.2
DDX55-213ENST00000545042 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
DDX55-213ENST00000545042 VAMP3Q15836 100 aa7.58□□□□□ -1.2
DDX55-213ENST00000545042 DEFB105AQ8NG35 78 aa7.58□□□□□ -1.2
DDX55-213ENST00000545042 VAMP8Q9BV40 100 aa7.58□□□□□ -1.2
DDX55-213ENST00000545042 FP248Q71RG6 208 aaPredicted RBP7.57□□□□□ -1.2
DDX55-213ENST00000545042 PAM16Q9Y3D7 125 aa7.57□□□□□ -1.2
DDX55-213ENST00000545042 TEX49A0A1B0GTD5 131 aa7.56□□□□□ -1.2
DDX55-213ENST00000545042 SLC25A20O43772 301 aa7.56□□□□□ -1.2
DDX55-213ENST00000545042 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
DDX55-213ENST00000545042 SPATA45Q537H7 98 aa7.56□□□□□ -1.2
DDX55-213ENST00000545042 C14orf144Q96I85 54 aa7.55□□□□□ -1.2
DDX55-213ENST00000545042 CDIP1Q9H305 208 aa7.55□□□□□ -1.2
DDX55-213ENST00000545042 Q1RN00 199 aa7.53□□□□□ -1.2
DDX55-213ENST00000545042 C12orf57Q99622 126 aa7.53□□□□□ -1.2
DDX55-213ENST00000545042 IGLV5-48A0A075B6I7 105 aa7.52□□□□□ -1.21
DDX55-213ENST00000545042 Q8N377 158 aa7.52□□□□□ -1.21
DDX55-213ENST00000545042 HIGD1BQ9P298 99 aa7.52□□□□□ -1.21
DDX55-213ENST00000545042 PRO1933Q9H354 126 aa7.51□□□□□ -1.21
DDX55-213ENST00000545042 LINC00575Q6W349 94 aa7.5□□□□□ -1.21
DDX55-213ENST00000545042 LIMD2Q9BT23 127 aa7.5□□□□□ -1.21
DDX55-213ENST00000545042 LINC01547P58512 204 aaPredicted RBP7.49□□□□□ -1.21
DDX55-213ENST00000545042 BVES-AS1Q5T3Y7 98 aa7.49□□□□□ -1.21
DDX55-213ENST00000545042 HRCT1Q6UXD1 115 aa7.49□□□□□ -1.21
DDX55-213ENST00000545042 RAB37Q96AX2 223 aa7.49□□□□□ -1.21
DDX55-213ENST00000545042 hADV29S1A0JD25 119 aa7.48□□□□□ -1.21
DDX55-213ENST00000545042 TMA7Q9Y2S6 64 aaKnown RBP7.48□□□□□ -1.21
DDX55-213ENST00000545042 H7C2G1 150 aa7.47□□□□□ -1.21
DDX55-213ENST00000545042 CD164Q04900 197 aa7.47□□□□□ -1.21
DDX55-213ENST00000545042 SMIM29Q86T20 159 aa7.47□□□□□ -1.21
DDX55-213ENST00000545042 TMEM238LA0A1B0GVL6 79 aa7.46□□□□□ -1.22
DDX55-213ENST00000545042 A6NJY4 79 aa7.46□□□□□ -1.22
DDX55-213ENST00000545042 F8WEM9 126 aa7.46□□□□□ -1.22
DDX55-213ENST00000545042 CFC1BP0CG36 223 aa7.46□□□□□ -1.22
DDX55-213ENST00000545042 CFC1P0CG37 223 aa7.46□□□□□ -1.22
DDX55-213ENST00000545042 C2orf91Q6ZV80 131 aa7.46□□□□□ -1.22
DDX55-213ENST00000545042 A0A0B4J2C4 111 aa7.45□□□□□ -1.22
DDX55-213ENST00000545042 SNCGO76070 127 aa7.45□□□□□ -1.22
DDX55-213ENST00000545042 KRTAP13-3Q3SY46 172 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms