RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ERC2-IT1O76042 136 aa9.21□□□□□ -0.94
DDX55-212ENST00000544738 SSBP3-AS1Q7Z2R9 100 aa9.21□□□□□ -0.94
DDX55-212ENST00000544738 Q9BRP9 147 aa9.21□□□□□ -0.94
DDX55-212ENST00000544738 TRAV23DV6A0A075B6W5 121 aa9.2□□□□□ -0.94
DDX55-212ENST00000544738 ADAMTSL4-AS1Q5T5F5 129 aa9.2□□□□□ -0.94
DDX55-212ENST00000544738 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST1H2BKO60814 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST1H2BJP06899 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST1H2BOP23527 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST1H2BBP33778 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST1H2BDP58876 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 NPC2P61916 151 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST1H2BCP62807 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST2H2BEQ16778 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.19□□□□□ -0.94
DDX55-212ENST00000544738 SOSTDC1Q6X4U4 206 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST1H2BHQ93079 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST1H2BNQ99877 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 HIST1H2BMQ99879 126 aa9.19□□□□□ -0.94
DDX55-212ENST00000544738 IGLV9-49A0A0B4J1Y8 123 aa9.18□□□□□ -0.94
DDX55-212ENST00000544738 HINT1P49773 126 aaPredicted RBP9.18□□□□□ -0.94
DDX55-212ENST00000544738 MOBPQ13875 183 aa9.18□□□□□ -0.94
DDX55-212ENST00000544738 EIF4EBP3O60516 100 aaPredicted RBP9.17□□□□□ -0.94
DDX55-212ENST00000544738 RPS29P62273 56 aaKnown RBP9.17□□□□□ -0.94
DDX55-212ENST00000544738 PET117Q6UWS5 81 aa9.17□□□□□ -0.94
DDX55-212ENST00000544738 C5orf52A6NGY3 159 aa9.16□□□□□ -0.94
DDX55-212ENST00000544738 TIMM17BO60830 172 aa9.16□□□□□ -0.94
DDX55-212ENST00000544738 LINC01545Q5VT33 79 aa9.16□□□□□ -0.94
DDX55-212ENST00000544738 SPANXCQ9NY87 97 aa9.16□□□□□ -0.94
DDX55-212ENST00000544738 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.94
DDX55-212ENST00000544738 LITAFQ99732 161 aa9.14□□□□□ -0.95
DDX55-212ENST00000544738 ZNF815PA8K554 130 aa9.12□□□□□ -0.95
DDX55-212ENST00000544738 KRTAP13-3Q3SY46 172 aa9.12□□□□□ -0.95
DDX55-212ENST00000544738 OR13C6PQ8NH95 151 aa9.12□□□□□ -0.95
DDX55-212ENST00000544738 SLC25A20O43772 301 aa9.11□□□□□ -0.95
DDX55-212ENST00000544738 KRTAP4-1Q9BYQ7 146 aa9.11□□□□□ -0.95
DDX55-212ENST00000544738 C3orf79P0CE67 100 aa9.1□□□□□ -0.95
DDX55-212ENST00000544738 C9orf153Q5TBE3 101 aa9.1□□□□□ -0.95
DDX55-212ENST00000544738 LINC00518Q8N0U6 118 aa9.1□□□□□ -0.95
DDX55-212ENST00000544738 Q8N377 158 aa9.1□□□□□ -0.95
DDX55-212ENST00000544738 SPANXDQ9BXN6 97 aa9.1□□□□□ -0.95
DDX55-212ENST00000544738 DHRS4-AS1Q9P1J3 65 aa9.1□□□□□ -0.95
DDX55-212ENST00000544738 SLC25A34Q6PIV7 304 aa9.09□□□□□ -0.95
DDX55-212ENST00000544738 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
DDX55-212ENST00000544738 COA6Q5JTJ3 125 aaKnown RBP9.08□□□□□ -0.96
DDX55-212ENST00000544738 ST20-AS1Q8NBB2 130 aa9.08□□□□□ -0.96
DDX55-212ENST00000544738 TTTY13Q9BZ97 58 aa9.07□□□□□ -0.96
DDX55-212ENST00000544738 SPRR1BP22528 89 aa9.06□□□□□ -0.96
DDX55-212ENST00000544738 KRTDAPP60985 99 aa9.06□□□□□ -0.96
DDX55-212ENST00000544738 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
DDX55-212ENST00000544738 C20orf202A1L168 122 aa9.05□□□□□ -0.96
DDX55-212ENST00000544738 SCGB1D4Q6XE38 83 aa9.05□□□□□ -0.96
DDX55-212ENST00000544738 COX7BP24311 80 aa9.03□□□□□ -0.96
DDX55-212ENST00000544738 AKR1D1P51857 326 aa9.03□□□□□ -0.96
DDX55-212ENST00000544738 ELOF1P60002 83 aaKnown RBP9.03□□□□□ -0.96
DDX55-212ENST00000544738 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
DDX55-212ENST00000544738 LAMTOR3Q9UHA4 124 aa9.03□□□□□ -0.96
DDX55-212ENST00000544738 IFITM1P13164 125 aa9.02□□□□□ -0.97
DDX55-212ENST00000544738 C6orf99Q4VX62 202 aa9.02□□□□□ -0.97
DDX55-212ENST00000544738 Q6ZVH6 145 aa9.01□□□□□ -0.97
DDX55-212ENST00000544738 TRBV7-6A0A0J9YX20 115 aa9□□□□□ -0.97
DDX55-212ENST00000544738 TAL2Q16559 108 aa9□□□□□ -0.97
DDX55-212ENST00000544738 LIMD2Q9BT23 127 aa9□□□□□ -0.97
DDX55-212ENST00000544738 KRTAP9-7A8MTY7 169 aa8.99□□□□□ -0.97
DDX55-212ENST00000544738 ANKRD39Q53RE8 183 aa8.98□□□□□ -0.97
DDX55-212ENST00000544738 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
DDX55-212ENST00000544738 TEX49A0A1B0GTD5 131 aa8.97□□□□□ -0.97
DDX55-212ENST00000544738 A0A1B0GWB2 263 aa8.96□□□□□ -0.98
DDX55-212ENST00000544738 A6NDN8 102 aa8.96□□□□□ -0.98
DDX55-212ENST00000544738 SNRPEP62304 92 aaKnown RBP8.96□□□□□ -0.98
DDX55-212ENST00000544738 XP32Q5T750 250 aa8.96□□□□□ -0.98
DDX55-212ENST00000544738 ATOH7Q8N100 152 aa8.96□□□□□ -0.98
DDX55-212ENST00000544738 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
DDX55-212ENST00000544738 CFC1BP0CG36 223 aa8.94□□□□□ -0.98
DDX55-212ENST00000544738 CD164Q04900 197 aa8.94□□□□□ -0.98
DDX55-212ENST00000544738 Q1RN00 199 aa8.94□□□□□ -0.98
DDX55-212ENST00000544738 HRCT1Q6UXD1 115 aa8.94□□□□□ -0.98
DDX55-212ENST00000544738 MUSTN1Q8IVN3 82 aa8.94□□□□□ -0.98
DDX55-212ENST00000544738 PRO1933Q9H354 126 aa8.94□□□□□ -0.98
DDX55-212ENST00000544738 A4D1N5 150 aa8.93□□□□□ -0.98
DDX55-212ENST00000544738 PCP2Q8IVA1 136 aa8.93□□□□□ -0.98
DDX55-212ENST00000544738 TRAV13-2A0A0B4J235 113 aa8.92□□□□□ -0.98
DDX55-212ENST00000544738 MT1HP80294 61 aa8.92□□□□□ -0.98
DDX55-212ENST00000544738 NHP2Q9NX24 153 aaKnown RBP8.91□□□□□ -0.98
DDX55-212ENST00000544738 IGLV5-48A0A075B6I7 105 aa8.9□□□□□ -0.98
DDX55-212ENST00000544738 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.9□□□□□ -0.98
DDX55-212ENST00000544738 H7C2G1 150 aa8.9□□□□□ -0.98
DDX55-212ENST00000544738 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
DDX55-212ENST00000544738 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
DDX55-212ENST00000544738 Q5XG85 94 aa8.87□□□□□ -0.99
DDX55-212ENST00000544738 S100A2P29034 98 aa8.86□□□□□ -0.99
DDX55-212ENST00000544738 KRTAP10-6P60371 365 aaPredicted RBP8.86□□□□□ -0.99
DDX55-212ENST00000544738 VAMP3Q15836 100 aa8.86□□□□□ -0.99
DDX55-212ENST00000544738 SMIM11BQ8TCY0 68 aa8.86□□□□□ -0.99
DDX55-212ENST00000544738 HSBP1L1C9JCN9 74 aa8.85□□□□□ -0.99
DDX55-212ENST00000544738 KRTAP19-2Q3LHN2 52 aa8.85□□□□□ -0.99
DDX55-212ENST00000544738 HIST3H2BBQ8N257 126 aa8.84□□□□□ -0.99
DDX55-212ENST00000544738 HIST1H2BLQ99880 126 aa8.84□□□□□ -0.99
DDX55-212ENST00000544738 C9orf92A6NGG3 77 aa8.82□□□□□ -1
DDX55-212ENST00000544738 C1orf195Q5TG92 126 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms