RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 Q6ZRX8 168 aa8.05□□□□□ -1.12
VAMP1-208ENST00000544432 C20orf202A1L168 122 aa8.04□□□□□ -1.12
VAMP1-208ENST00000544432 ZNF815PA8K554 130 aa8.04□□□□□ -1.12
VAMP1-208ENST00000544432 AKR1D1P51857 326 aa8.04□□□□□ -1.12
VAMP1-208ENST00000544432 KRTDAPP60985 99 aa8.04□□□□□ -1.12
VAMP1-208ENST00000544432 NPC2P61916 151 aa8.04□□□□□ -1.12
VAMP1-208ENST00000544432 LINC00308Q8TCZ7 52 aa8.04□□□□□ -1.12
VAMP1-208ENST00000544432 SPANXCQ9NY87 97 aa8.04□□□□□ -1.12
VAMP1-208ENST00000544432 TRAV23DV6A0A075B6W5 121 aa8.03□□□□□ -1.12
VAMP1-208ENST00000544432 JOSD1Q15040 202 aaPredicted RBP8.03□□□□□ -1.12
VAMP1-208ENST00000544432 Q9BRP9 147 aa8.03□□□□□ -1.12
VAMP1-208ENST00000544432 ZNF73O43830 326 aaPredicted RBP8.02□□□□□ -1.13
VAMP1-208ENST00000544432 ERC2-IT1O76042 136 aa8.02□□□□□ -1.13
VAMP1-208ENST00000544432 PPDPFQ9H3Y8 114 aa8.01□□□□□ -1.13
VAMP1-208ENST00000544432 C5orf52A6NGY3 159 aa8□□□□□ -1.13
VAMP1-208ENST00000544432 GAGE2AQ6NT46 116 aa8□□□□□ -1.13
VAMP1-208ENST00000544432 LINC00518Q8N0U6 118 aa8□□□□□ -1.13
VAMP1-208ENST00000544432 TTTY13Q9BZ97 58 aa8□□□□□ -1.13
VAMP1-208ENST00000544432 S100A1P23297 94 aa7.99□□□□□ -1.13
VAMP1-208ENST00000544432 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
VAMP1-208ENST00000544432 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
VAMP1-208ENST00000544432 SPANXDQ9BXN6 97 aa7.99□□□□□ -1.13
VAMP1-208ENST00000544432 ANKRD39Q53RE8 183 aa7.98□□□□□ -1.13
VAMP1-208ENST00000544432 SSBP3-AS1Q7Z2R9 100 aa7.98□□□□□ -1.13
VAMP1-208ENST00000544432 Q8NBF4 154 aa7.98□□□□□ -1.13
VAMP1-208ENST00000544432 SNRPEP62304 92 aaKnown RBP7.97□□□□□ -1.13
VAMP1-208ENST00000544432 Q6ZVH6 145 aa7.97□□□□□ -1.13
VAMP1-208ENST00000544432 OR13C6PQ8NH95 151 aa7.97□□□□□ -1.13
VAMP1-208ENST00000544432 COPS9Q8WXC6 57 aa7.97□□□□□ -1.13
VAMP1-208ENST00000544432 RETNLBQ9BQ08 111 aa7.97□□□□□ -1.13
VAMP1-208ENST00000544432 SPINK1P00995 79 aa7.96□□□□□ -1.14
VAMP1-208ENST00000544432 IFITM1P13164 125 aa7.96□□□□□ -1.14
VAMP1-208ENST00000544432 TPRXLQ17RH7 258 aa7.96□□□□□ -1.14
VAMP1-208ENST00000544432 SCGB1D4Q6XE38 83 aa7.96□□□□□ -1.14
VAMP1-208ENST00000544432 IGLV7-46A0A075B6I9 117 aa7.95□□□□□ -1.14
VAMP1-208ENST00000544432 FP248Q71RG6 208 aaPredicted RBP7.94□□□□□ -1.14
VAMP1-208ENST00000544432 ATOH7Q8N100 152 aa7.94□□□□□ -1.14
VAMP1-208ENST00000544432 HIST3H2BBQ8N257 126 aa7.94□□□□□ -1.14
VAMP1-208ENST00000544432 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
VAMP1-208ENST00000544432 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
VAMP1-208ENST00000544432 MOBPQ13875 183 aa7.93□□□□□ -1.14
VAMP1-208ENST00000544432 HIST1H2BLQ99880 126 aa7.93□□□□□ -1.14
VAMP1-208ENST00000544432 IGLV9-49A0A0B4J1Y8 123 aa7.92□□□□□ -1.14
VAMP1-208ENST00000544432 PCP2Q8IVA1 136 aa7.92□□□□□ -1.14
VAMP1-208ENST00000544432 TRBV7-6A0A0J9YX20 115 aa7.91□□□□□ -1.14
VAMP1-208ENST00000544432 SPRR1BP22528 89 aa7.91□□□□□ -1.14
VAMP1-208ENST00000544432 S100A2P29034 98 aa7.91□□□□□ -1.14
VAMP1-208ENST00000544432 ELOF1P60002 83 aaKnown RBP7.91□□□□□ -1.14
VAMP1-208ENST00000544432 ST20-AS1Q8NBB2 130 aa7.91□□□□□ -1.14
VAMP1-208ENST00000544432 COX7BP24311 80 aa7.9□□□□□ -1.14
VAMP1-208ENST00000544432 MUC2Q02817 5179 aa7.89□□□□□ -1.15
VAMP1-208ENST00000544432 C6orf99Q4VX62 202 aa7.89□□□□□ -1.15
VAMP1-208ENST00000544432 SLC25A34Q6PIV7 304 aa7.89□□□□□ -1.15
VAMP1-208ENST00000544432 MUSTN1Q8IVN3 82 aa7.89□□□□□ -1.15
VAMP1-208ENST00000544432 CDIP1Q9H305 208 aa7.89□□□□□ -1.15
VAMP1-208ENST00000544432 S100A6P06703 90 aa7.88□□□□□ -1.15
VAMP1-208ENST00000544432 A0A1B0GWB2 263 aa7.86□□□□□ -1.15
VAMP1-208ENST00000544432 HSBP1L1C9JCN9 74 aa7.86□□□□□ -1.15
VAMP1-208ENST00000544432 C9orf153Q5TBE3 101 aa7.86□□□□□ -1.15
VAMP1-208ENST00000544432 Q8N377 158 aa7.86□□□□□ -1.15
VAMP1-208ENST00000544432 MUC17Q685J3 4493 aa7.85□□□□□ -1.15
VAMP1-208ENST00000544432 TRAV13-2A0A0B4J235 113 aa7.85□□□□□ -1.15
VAMP1-208ENST00000544432 A6NDN8 102 aa7.85□□□□□ -1.15
VAMP1-208ENST00000544432 SLC25A20O43772 301 aa7.85□□□□□ -1.15
VAMP1-208ENST00000544432 LAMTOR3Q9UHA4 124 aa7.85□□□□□ -1.15
VAMP1-208ENST00000544432 A4D1N5 150 aa7.83□□□□□ -1.16
VAMP1-208ENST00000544432 KRTAP13-3Q3SY46 172 aa7.83□□□□□ -1.16
VAMP1-208ENST00000544432 TEX49A0A1B0GTD5 131 aa7.82□□□□□ -1.16
VAMP1-208ENST00000544432 TAL2Q16559 108 aa7.82□□□□□ -1.16
VAMP1-208ENST00000544432 A0A0U1RQV1 116 aa7.81□□□□□ -1.16
VAMP1-208ENST00000544432 IGLV5-48A0A075B6I7 105 aa7.8□□□□□ -1.16
VAMP1-208ENST00000544432 SMIM11BQ8TCY0 68 aa7.8□□□□□ -1.16
VAMP1-208ENST00000544432 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
VAMP1-208ENST00000544432 NHP2Q9NX24 153 aaKnown RBP7.79□□□□□ -1.16
VAMP1-208ENST00000544432 LINC01547P58512 204 aaPredicted RBP7.78□□□□□ -1.16
VAMP1-208ENST00000544432 CD164Q04900 197 aa7.78□□□□□ -1.16
VAMP1-208ENST00000544432 DEFB105AQ8NG35 78 aa7.78□□□□□ -1.16
VAMP1-208ENST00000544432 SMIM29Q86T20 159 aa7.77□□□□□ -1.17
VAMP1-208ENST00000544432 LIMD2Q9BT23 127 aa7.77□□□□□ -1.17
VAMP1-208ENST00000544432 PRO1933Q9H354 126 aa7.77□□□□□ -1.17
VAMP1-208ENST00000544432 DLEU1O43261 78 aa7.76□□□□□ -1.17
VAMP1-208ENST00000544432 COX8AP10176 69 aa7.76□□□□□ -1.17
VAMP1-208ENST00000544432 VAMP3Q15836 100 aa7.76□□□□□ -1.17
VAMP1-208ENST00000544432 Q1RN00 199 aa7.75□□□□□ -1.17
VAMP1-208ENST00000544432 ASB16-AS1Q495Z4 193 aa7.73□□□□□ -1.17
VAMP1-208ENST00000544432 Q5XG85 94 aa7.73□□□□□ -1.17
VAMP1-208ENST00000544432 LINC00575Q6W349 94 aa7.73□□□□□ -1.17
VAMP1-208ENST00000544432 HIST1H4GQ99525 98 aa7.73□□□□□ -1.17
VAMP1-208ENST00000544432 H7C2G1 150 aa7.72□□□□□ -1.17
VAMP1-208ENST00000544432 HRCT1Q6UXD1 115 aa7.72□□□□□ -1.17
VAMP1-208ENST00000544432 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
VAMP1-208ENST00000544432 XP32Q5T750 250 aa7.7□□□□□ -1.18
VAMP1-208ENST00000544432 hADV29S1A0JD25 119 aa7.69□□□□□ -1.18
VAMP1-208ENST00000544432 HIGD1BQ9P298 99 aa7.69□□□□□ -1.18
VAMP1-208ENST00000544432 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
VAMP1-208ENST00000544432 LCE2BO14633 110 aa7.68□□□□□ -1.18
VAMP1-208ENST00000544432 BVES-AS1Q5T3Y7 98 aa7.67□□□□□ -1.18
VAMP1-208ENST00000544432 C14orf144Q96I85 54 aa7.67□□□□□ -1.18
VAMP1-208ENST00000544432 SPATA45Q537H7 98 aa7.66□□□□□ -1.18
VAMP1-208ENST00000544432 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms