RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 GHRHP01286 108 aa9.05□□□□□ -0.96
MSH2-206ENST00000543555 C7orf33Q8WU49 177 aa9.04□□□□□ -0.96
MSH2-206ENST00000543555 PLA2G2DQ9UNK4 145 aa9.04□□□□□ -0.96
MSH2-206ENST00000543555 DSCR8Q96T75 97 aa9.03□□□□□ -0.96
MSH2-206ENST00000543555 KCNQ1DNQ9H478 68 aa9.03□□□□□ -0.96
MSH2-206ENST00000543555 HIST1H4AP62805 103 aaKnown RBP9.02□□□□□ -0.97
MSH2-206ENST00000543555 DNAH7Q8WXX0 4024 aa9.02□□□□□ -0.97
MSH2-206ENST00000543555 B5MCH6 92 aa9.01□□□□□ -0.97
MSH2-206ENST00000543555 PDE6GP18545 87 aa9.01□□□□□ -0.97
MSH2-206ENST00000543555 UBL5Q9BZL1 73 aa9.01□□□□□ -0.97
MSH2-206ENST00000543555 M0R2N4 97 aa9□□□□□ -0.97
MSH2-206ENST00000543555 ATP5EP2Q5VTU8 51 aa9□□□□□ -0.97
MSH2-206ENST00000543555 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
MSH2-206ENST00000543555 STARD9Q9P2P6 4700 aa8.99□□□□□ -0.97
MSH2-206ENST00000543555 FAM168BA1KXE4 195 aa8.99□□□□□ -0.97
MSH2-206ENST00000543555 TRBV7-4A0A0J9YYF1 115 aa8.99□□□□□ -0.97
MSH2-206ENST00000543555 A0A087WVE0 104 aa8.98□□□□□ -0.97
MSH2-206ENST00000543555 PLECQ15149 4684 aaKnown RBP8.97□□□□□ -0.97
MSH2-206ENST00000543555 KRTAP7-1Q8IUC3 87 aa8.97□□□□□ -0.97
MSH2-206ENST00000543555 KRTAP1-5Q9BYS1 174 aa8.97□□□□□ -0.97
MSH2-206ENST00000543555 ATOX1O00244 68 aa8.97□□□□□ -0.97
MSH2-206ENST00000543555 IGLV1-50A0A075B6I6 118 aa8.96□□□□□ -0.97
MSH2-206ENST00000543555 LOC107984640A0A0U1RRK4 108 aa8.96□□□□□ -0.97
MSH2-206ENST00000543555 RPL37AP8A6NKH3 93 aa8.96□□□□□ -0.97
MSH2-206ENST00000543555 PRYO14603 147 aa8.96□□□□□ -0.98
MSH2-206ENST00000543555 KRTAP4-16G5E9R7 235 aaPredicted RBP8.94□□□□□ -0.98
MSH2-206ENST00000543555 APLNQ9ULZ1 77 aa8.94□□□□□ -0.98
MSH2-206ENST00000543555 SPRR1AP35321 89 aa8.94□□□□□ -0.98
MSH2-206ENST00000543555 Q6ZRX8 168 aa8.94□□□□□ -0.98
MSH2-206ENST00000543555 Q6ZVQ6 151 aa8.94□□□□□ -0.98
MSH2-206ENST00000543555 FAM19A5Q7Z5A7 132 aaPredicted RBP8.93□□□□□ -0.98
MSH2-206ENST00000543555 UBE2DNLQ8IWF7 75 aa8.93□□□□□ -0.98
MSH2-206ENST00000543555 C3orf22Q8N5N4 141 aa8.93□□□□□ -0.98
MSH2-206ENST00000543555 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
MSH2-206ENST00000543555 UQCRQO14949 82 aa8.92□□□□□ -0.98
MSH2-206ENST00000543555 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
MSH2-206ENST00000543555 FAM19A1Q7Z5A9 133 aa8.92□□□□□ -0.98
MSH2-206ENST00000543555 SS18L2Q9UHA2 77 aa8.92□□□□□ -0.98
MSH2-206ENST00000543555 ETDCA0A1B0GVM5 59 aa8.91□□□□□ -0.98
MSH2-206ENST00000543555 COX7CP15954 63 aa8.91□□□□□ -0.98
MSH2-206ENST00000543555 Q8N377 158 aa8.91□□□□□ -0.98
MSH2-206ENST00000543555 Q9BRP9 147 aa8.91□□□□□ -0.98
MSH2-206ENST00000543555 LINC01547P58512 204 aaPredicted RBP8.9□□□□□ -0.98
MSH2-206ENST00000543555 DEFB105AQ8NG35 78 aa8.9□□□□□ -0.98
MSH2-206ENST00000543555 PSCAO43653 123 aa8.9□□□□□ -0.99
MSH2-206ENST00000543555 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
MSH2-206ENST00000543555 HAMPP81172 84 aa8.89□□□□□ -0.99
MSH2-206ENST00000543555 C9orf153Q5TBE3 101 aa8.89□□□□□ -0.99
MSH2-206ENST00000543555 A0A096LNI7 61 aa8.87□□□□□ -0.99
MSH2-206ENST00000543555 C16orf90A8MZG2 172 aa8.86□□□□□ -0.99
MSH2-206ENST00000543555 CXCL6P80162 114 aa8.86□□□□□ -0.99
MSH2-206ENST00000543555 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
MSH2-206ENST00000543555 DYNC2H1Q8NCM8 4307 aaKnown RBP8.86□□□□□ -0.99
MSH2-206ENST00000543555 IGLV5-48A0A075B6I7 105 aa8.85□□□□□ -0.99
MSH2-206ENST00000543555 REG3GQ6UW15 175 aa8.85□□□□□ -0.99
MSH2-206ENST00000543555 DNAH10Q8IVF4 4471 aa8.84□□□□□ -0.99
MSH2-206ENST00000543555 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
MSH2-206ENST00000543555 ST20-AS1Q8NBB2 130 aa8.84□□□□□ -0.99
MSH2-206ENST00000543555 KMT2AQ03164 3969 aa8.84□□□□□ -0.99
MSH2-206ENST00000543555 C14orf177Q52M58 125 aa8.84□□□□□ -0.99
MSH2-206ENST00000543555 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.83□□□□□ -1
MSH2-206ENST00000543555 ERC2-IT1O76042 136 aa8.83□□□□□ -1
MSH2-206ENST00000543555 CRYGAP11844 174 aa8.83□□□□□ -1
MSH2-206ENST00000543555 UBE2BP63146 152 aa8.83□□□□□ -1
MSH2-206ENST00000543555 A0A1W2PNN7 141 aa8.83□□□□□ -1
MSH2-206ENST00000543555 NUPR2A6NF83 97 aa8.82□□□□□ -1
MSH2-206ENST00000543555 TNP2Q05952 138 aa8.81□□□□□ -1
MSH2-206ENST00000543555 SCXQ7RTU7 201 aa8.8□□□□□ -1
MSH2-206ENST00000543555 NBDYA0A0U1RRE5 68 aa8.8□□□□□ -1
MSH2-206ENST00000543555 LRCOL1A6NCL2 159 aa8.78□□□□□ -1
MSH2-206ENST00000543555 C3orf84H3BNL1 204 aa8.78□□□□□ -1
MSH2-206ENST00000543555 NREPQ16612 68 aa8.78□□□□□ -1
MSH2-206ENST00000543555 C1orf137Q5JT78 98 aa8.78□□□□□ -1
MSH2-206ENST00000543555 CHTF8P0CG12 524 aa8.77□□□□□ -1.01
MSH2-206ENST00000543555 FUSP35637 526 aaKnown RBP eCLIP8.77□□□□□ -1.012e-10■□□□□ 9.8
MSH2-206ENST00000543555 A0A1W2PNM2 257 aa8.76□□□□□ -1.01
MSH2-206ENST00000543555 BCE1O60756 84 aa8.76□□□□□ -1.01
MSH2-206ENST00000543555 A0A1B0GW54 56 aa8.76□□□□□ -1.01
MSH2-206ENST00000543555 C9orf163Q8N9P6 203 aa8.76□□□□□ -1.01
MSH2-206ENST00000543555 PRLHP81277 87 aa8.75□□□□□ -1.01
MSH2-206ENST00000543555 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
MSH2-206ENST00000543555 Q6ZRN7 208 aaPredicted RBP8.75□□□□□ -1.01
MSH2-206ENST00000543555 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
MSH2-206ENST00000543555 Q8NBF4 154 aa8.74□□□□□ -1.01
MSH2-206ENST00000543555 PHF5AQ7RTV0 110 aaKnown RBP8.73□□□□□ -1.01
MSH2-206ENST00000543555 HYDINQ4G0P3 5121 aa8.73□□□□□ -1.01
MSH2-206ENST00000543555 WWC2-AS2Q96NR7 200 aa8.73□□□□□ -1.01
MSH2-206ENST00000543555 PKIGQ9Y2B9 76 aa8.72□□□□□ -1.01
MSH2-206ENST00000543555 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
MSH2-206ENST00000543555 BPY2O14599 106 aa8.72□□□□□ -1.01
MSH2-206ENST00000543555 LY6G6CO95867 125 aa8.72□□□□□ -1.01
MSH2-206ENST00000543555 KRTAP11-1Q8IUC1 163 aa8.72□□□□□ -1.01
MSH2-206ENST00000543555 SMIM20Q8N5G0 67 aa8.71□□□□□ -1.01
MSH2-206ENST00000543555 SPRR4Q96PI1 79 aa8.71□□□□□ -1.01
MSH2-206ENST00000543555 HIGD2AQ9BW72 106 aa8.71□□□□□ -1.01
MSH2-206ENST00000543555 Q8N9L7 120 aa8.71□□□□□ -1.02
MSH2-206ENST00000543555 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
MSH2-206ENST00000543555 F8WEM9 126 aa8.7□□□□□ -1.02
MSH2-206ENST00000543555 LINC00476Q8WZB0 136 aa8.7□□□□□ -1.02
MSH2-206ENST00000543555 VPS13DQ5THJ4 4388 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms