RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 FAT4Q6V0I7 4981 aa7.49□□□□□ -1.21
TNFRSF1A-215ENST00000543359 COA6Q5JTJ3 125 aaKnown RBP7.48□□□□□ -1.21
TNFRSF1A-215ENST00000543359 PET117Q6UWS5 81 aa7.48□□□□□ -1.21
TNFRSF1A-215ENST00000543359 Q6ZRX8 168 aa7.48□□□□□ -1.21
TNFRSF1A-215ENST00000543359 NPC2P61916 151 aa7.47□□□□□ -1.21
TNFRSF1A-215ENST00000543359 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
TNFRSF1A-215ENST00000543359 Q8NBF4 154 aa7.47□□□□□ -1.21
TNFRSF1A-215ENST00000543359 MIEN1Q9BRT3 115 aa7.47□□□□□ -1.21
TNFRSF1A-215ENST00000543359 IGLV7-46A0A075B6I9 117 aa7.46□□□□□ -1.22
TNFRSF1A-215ENST00000543359 C3orf79P0CE67 100 aa7.46□□□□□ -1.22
TNFRSF1A-215ENST00000543359 S100A12P80511 92 aa7.46□□□□□ -1.22
TNFRSF1A-215ENST00000543359 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.22
TNFRSF1A-215ENST00000543359 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
TNFRSF1A-215ENST00000543359 TIMM17BO60830 172 aa7.45□□□□□ -1.22
TNFRSF1A-215ENST00000543359 S100A7L2Q5SY68 101 aa7.45□□□□□ -1.22
TNFRSF1A-215ENST00000543359 LINC00308Q8TCZ7 52 aa7.45□□□□□ -1.22
TNFRSF1A-215ENST00000543359 TMA7Q9Y2S6 64 aaKnown RBP7.45□□□□□ -1.22
TNFRSF1A-215ENST00000543359 LOC105371267A0A1B0GV96 52 aa7.44□□□□□ -1.22
TNFRSF1A-215ENST00000543359 TTTY13Q9BZ97 58 aa7.44□□□□□ -1.22
TNFRSF1A-215ENST00000543359 ZNF73O43830 326 aaPredicted RBP7.43□□□□□ -1.22
TNFRSF1A-215ENST00000543359 C4orf48Q5BLP8 95 aa7.42□□□□□ -1.22
TNFRSF1A-215ENST00000543359 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
TNFRSF1A-215ENST00000543359 ZNF815PA8K554 130 aa7.41□□□□□ -1.22
TNFRSF1A-215ENST00000543359 SPINK1P00995 79 aa7.41□□□□□ -1.22
TNFRSF1A-215ENST00000543359 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
TNFRSF1A-215ENST00000543359 FP248Q71RG6 208 aaPredicted RBP7.41□□□□□ -1.22
TNFRSF1A-215ENST00000543359 SSBP3-AS1Q7Z2R9 100 aa7.41□□□□□ -1.22
TNFRSF1A-215ENST00000543359 IGLV9-49A0A0B4J1Y8 123 aa7.4□□□□□ -1.22
TNFRSF1A-215ENST00000543359 MOBPQ13875 183 aa7.4□□□□□ -1.22
TNFRSF1A-215ENST00000543359 ST20-AS1Q8NBB2 130 aa7.4□□□□□ -1.22
TNFRSF1A-215ENST00000543359 CDIP1Q9H305 208 aa7.4□□□□□ -1.22
TNFRSF1A-215ENST00000543359 KRTDAPP60985 99 aa7.39□□□□□ -1.23
TNFRSF1A-215ENST00000543359 JOSD1Q15040 202 aaPredicted RBP7.39□□□□□ -1.23
TNFRSF1A-215ENST00000543359 C5orf52A6NGY3 159 aa7.38□□□□□ -1.23
TNFRSF1A-215ENST00000543359 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
TNFRSF1A-215ENST00000543359 RPS29P62273 56 aaKnown RBP7.37□□□□□ -1.23
TNFRSF1A-215ENST00000543359 KRTAP13-3Q3SY46 172 aa7.37□□□□□ -1.23
TNFRSF1A-215ENST00000543359 Q8N377 158 aa7.37□□□□□ -1.23
TNFRSF1A-215ENST00000543359 SPANXDQ9BXN6 97 aa7.37□□□□□ -1.23
TNFRSF1A-215ENST00000543359 SPRR1BP22528 89 aa7.36□□□□□ -1.23
TNFRSF1A-215ENST00000543359 OR13C6PQ8NH95 151 aa7.36□□□□□ -1.23
TNFRSF1A-215ENST00000543359 CBY1Q9Y3M2 126 aa7.36□□□□□ -1.23
TNFRSF1A-215ENST00000543359 LINC00518Q8N0U6 118 aa7.35□□□□□ -1.23
TNFRSF1A-215ENST00000543359 PCP2Q8IVA1 136 aa7.34□□□□□ -1.23
TNFRSF1A-215ENST00000543359 ATOH7Q8N100 152 aa7.34□□□□□ -1.23
TNFRSF1A-215ENST00000543359 HINT1P49773 126 aaPredicted RBP7.33□□□□□ -1.24
TNFRSF1A-215ENST00000543359 ELOF1P60002 83 aaKnown RBP7.33□□□□□ -1.24
TNFRSF1A-215ENST00000543359 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
TNFRSF1A-215ENST00000543359 DHRS4-AS1Q9P1J3 65 aa7.33□□□□□ -1.24
TNFRSF1A-215ENST00000543359 C20orf202A1L168 122 aa7.32□□□□□ -1.24
TNFRSF1A-215ENST00000543359 C6orf99Q4VX62 202 aa7.32□□□□□ -1.24
TNFRSF1A-215ENST00000543359 A0A0U1RQV1 116 aa7.31□□□□□ -1.24
TNFRSF1A-215ENST00000543359 IFITM1P13164 125 aa7.31□□□□□ -1.24
TNFRSF1A-215ENST00000543359 COX7BP24311 80 aa7.31□□□□□ -1.24
TNFRSF1A-215ENST00000543359 C9orf153Q5TBE3 101 aa7.31□□□□□ -1.24
TNFRSF1A-215ENST00000543359 SCGB1D4Q6XE38 83 aa7.31□□□□□ -1.24
TNFRSF1A-215ENST00000543359 TRBV7-6A0A0J9YX20 115 aa7.3□□□□□ -1.24
TNFRSF1A-215ENST00000543359 SLC25A20O43772 301 aa7.3□□□□□ -1.24
TNFRSF1A-215ENST00000543359 Q6ZVH6 145 aa7.3□□□□□ -1.24
TNFRSF1A-215ENST00000543359 MUSTN1Q8IVN3 82 aa7.3□□□□□ -1.24
TNFRSF1A-215ENST00000543359 HIST3H2BBQ8N257 126 aa7.29□□□□□ -1.24
TNFRSF1A-215ENST00000543359 ASB16-AS1Q495Z4 193 aa7.28□□□□□ -1.24
TNFRSF1A-215ENST00000543359 HIST1H2BLQ99880 126 aa7.28□□□□□ -1.24
TNFRSF1A-215ENST00000543359 AKR1D1P51857 326 aa7.27□□□□□ -1.25
TNFRSF1A-215ENST00000543359 LINC01547P58512 204 aaPredicted RBP7.27□□□□□ -1.25
TNFRSF1A-215ENST00000543359 COPS9Q8WXC6 57 aa7.27□□□□□ -1.25
TNFRSF1A-215ENST00000543359 SNRPEP62304 92 aaKnown RBP7.26□□□□□ -1.25
TNFRSF1A-215ENST00000543359 SMIM29Q86T20 159 aa7.26□□□□□ -1.25
TNFRSF1A-215ENST00000543359 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
TNFRSF1A-215ENST00000543359 SLC25A34Q6PIV7 304 aa7.25□□□□□ -1.25
TNFRSF1A-215ENST00000543359 LAMTOR3Q9UHA4 124 aa7.25□□□□□ -1.25
TNFRSF1A-215ENST00000543359 IGLV5-48A0A075B6I7 105 aa7.24□□□□□ -1.25
TNFRSF1A-215ENST00000543359 A0A1B0GWB2 263 aa7.24□□□□□ -1.25
TNFRSF1A-215ENST00000543359 A6NDN8 102 aa7.24□□□□□ -1.25
TNFRSF1A-215ENST00000543359 TEX49A0A1B0GTD5 131 aa7.23□□□□□ -1.25
TNFRSF1A-215ENST00000543359 TAL2Q16559 108 aa7.23□□□□□ -1.25
TNFRSF1A-215ENST00000543359 XP32Q5T750 250 aa7.23□□□□□ -1.25
TNFRSF1A-215ENST00000543359 DEFB105AQ8NG35 78 aa7.23□□□□□ -1.25
TNFRSF1A-215ENST00000543359 Q1RN00 199 aa7.22□□□□□ -1.25
TNFRSF1A-215ENST00000543359 HRCT1Q6UXD1 115 aa7.22□□□□□ -1.25
TNFRSF1A-215ENST00000543359 SMIM11BQ8TCY0 68 aa7.22□□□□□ -1.25
TNFRSF1A-215ENST00000543359 TRAV13-2A0A0B4J235 113 aa7.21□□□□□ -1.26
TNFRSF1A-215ENST00000543359 CD164Q04900 197 aa7.21□□□□□ -1.26
TNFRSF1A-215ENST00000543359 A4D1N5 150 aa7.2□□□□□ -1.26
TNFRSF1A-215ENST00000543359 S100A2P29034 98 aa7.2□□□□□ -1.26
TNFRSF1A-215ENST00000543359 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
TNFRSF1A-215ENST00000543359 LIMD2Q9BT23 127 aa7.19□□□□□ -1.26
TNFRSF1A-215ENST00000543359 PRO1933Q9H354 126 aa7.19□□□□□ -1.26
TNFRSF1A-215ENST00000543359 A0A0G2JQZ4 141 aa7.18□□□□□ -1.26
TNFRSF1A-215ENST00000543359 Q5XG85 94 aa7.18□□□□□ -1.26
TNFRSF1A-215ENST00000543359 HSBP1L1C9JCN9 74 aa7.15□□□□□ -1.26
TNFRSF1A-215ENST00000543359 H7C2G1 150 aa7.15□□□□□ -1.26
TNFRSF1A-215ENST00000543359 S100A6P06703 90 aa7.15□□□□□ -1.26
TNFRSF1A-215ENST00000543359 LINC00575Q6W349 94 aa7.15□□□□□ -1.26
TNFRSF1A-215ENST00000543359 C1orf195Q5TG92 126 aa7.14□□□□□ -1.27
TNFRSF1A-215ENST00000543359 KRTAP9-2Q9BYQ4 174 aa7.14□□□□□ -1.27
TNFRSF1A-215ENST00000543359 NHP2Q9NX24 153 aaKnown RBP7.14□□□□□ -1.27
TNFRSF1A-215ENST00000543359 SCGB1D1O95968 90 aa7.12□□□□□ -1.27
TNFRSF1A-215ENST00000543359 C9orf92A6NGG3 77 aa7.11□□□□□ -1.27
TNFRSF1A-215ENST00000543359 DLEU1O43261 78 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms