RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
TNFRSF1A-214ENST00000543048 ERG28Q9UKR5 140 aa5.89□□□□□ -1.47
TNFRSF1A-214ENST00000543048 IGLV5-37A0A075B6J1 123 aa5.88□□□□□ -1.47
TNFRSF1A-214ENST00000543048 RPL37AP8A6NKH3 93 aa5.88□□□□□ -1.47
TNFRSF1A-214ENST00000543048 ZNF861PO60384 105 aa5.88□□□□□ -1.47
TNFRSF1A-214ENST00000543048 CTAG1AP78358 180 aa5.88□□□□□ -1.47
TNFRSF1A-214ENST00000543048 TAL2Q16559 108 aa5.88□□□□□ -1.47
TNFRSF1A-214ENST00000543048 NKAPP1Q8N9T2 125 aa5.88□□□□□ -1.47
TNFRSF1A-214ENST00000543048 LITAFQ99732 161 aa5.88□□□□□ -1.47
TNFRSF1A-214ENST00000543048 M0R143 59 aa5.87□□□□□ -1.47
TNFRSF1A-214ENST00000543048 Q6ZVH6 145 aa5.87□□□□□ -1.47
TNFRSF1A-214ENST00000543048 HIST1H4GQ99525 98 aa5.87□□□□□ -1.47
TNFRSF1A-214ENST00000543048 SPANXDQ9BXN6 97 aa5.87□□□□□ -1.47
TNFRSF1A-214ENST00000543048 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
TNFRSF1A-214ENST00000543048 SND1-IT1Q9HBX3 110 aa5.87□□□□□ -1.47
TNFRSF1A-214ENST00000543048 SPANXCQ9NY87 97 aa5.87□□□□□ -1.47
TNFRSF1A-214ENST00000543048 GAGE10A6NGK3 116 aa5.86□□□□□ -1.47
TNFRSF1A-214ENST00000543048 BCE1O60756 84 aa5.86□□□□□ -1.47
TNFRSF1A-214ENST00000543048 SMIM13P0DJ93 91 aa5.86□□□□□ -1.47
TNFRSF1A-214ENST00000543048 RPL24P83731 157 aaKnown RBP5.86□□□□□ -1.47
TNFRSF1A-214ENST00000543048 IGLV1-50A0A075B6I6 118 aa5.85□□□□□ -1.47
TNFRSF1A-214ENST00000543048 RPL28P46779 137 aaKnown RBP5.85□□□□□ -1.47
TNFRSF1A-214ENST00000543048 LINC00158P58513 81 aa5.85□□□□□ -1.47
TNFRSF1A-214ENST00000543048 ADAMTSL4-AS1Q5T5F5 129 aa5.85□□□□□ -1.47
TNFRSF1A-214ENST00000543048 PRR26Q8N8Z3 221 aa5.85□□□□□ -1.47
TNFRSF1A-214ENST00000543048 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 VPREB1P12018 145 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 IFITM1P13164 125 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 BVES-AS1Q5T3Y7 98 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 CEND1Q8N111 149 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 MIR7-3HGQ8N6C7 128 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 DAND5Q8N907 189 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 COPS9Q8WXC6 57 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 PPDPFQ9H3Y8 114 aa5.84□□□□□ -1.47
TNFRSF1A-214ENST00000543048 HINT1P49773 126 aaPredicted RBP5.83□□□□□ -1.48
TNFRSF1A-214ENST00000543048 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
TNFRSF1A-214ENST00000543048 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
TNFRSF1A-214ENST00000543048 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
TNFRSF1A-214ENST00000543048 IGKV2-28A0A075B6P5 120 aa5.82□□□□□ -1.48
TNFRSF1A-214ENST00000543048 IGKV2D-28P01615 120 aa5.82□□□□□ -1.48
TNFRSF1A-214ENST00000543048 RPL13AP40429 203 aaKnown RBP5.82□□□□□ -1.48
TNFRSF1A-214ENST00000543048 FXYD2P54710 66 aa5.82□□□□□ -1.48
TNFRSF1A-214ENST00000543048 BATFQ16520 125 aa5.82□□□□□ -1.48
TNFRSF1A-214ENST00000543048 LINC00308Q8TCZ7 52 aa5.82□□□□□ -1.48
TNFRSF1A-214ENST00000543048 UBE2AP49459 152 aa5.81□□□□□ -1.48
TNFRSF1A-214ENST00000543048 NPC2P61916 151 aa5.81□□□□□ -1.48
TNFRSF1A-214ENST00000543048 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
TNFRSF1A-214ENST00000543048 SOSTDC1Q6X4U4 206 aa5.81□□□□□ -1.48
TNFRSF1A-214ENST00000543048 MUSTN1Q8IVN3 82 aa5.81□□□□□ -1.48
TNFRSF1A-214ENST00000543048 SNHG12Q9BXW3 62 aa5.81□□□□□ -1.48
TNFRSF1A-214ENST00000543048 M0R378 163 aa5.8□□□□□ -1.48
TNFRSF1A-214ENST00000543048 KRTAP13-1Q8IUC0 172 aa5.8□□□□□ -1.48
TNFRSF1A-214ENST00000543048 Q8NDZ9 215 aa5.8□□□□□ -1.48
TNFRSF1A-214ENST00000543048 LOC107984156A0A0G2JMH3 177 aa5.79□□□□□ -1.48
TNFRSF1A-214ENST00000543048 A4D1N5 150 aa5.79□□□□□ -1.48
TNFRSF1A-214ENST00000543048 A6NDN8 102 aa5.79□□□□□ -1.48
TNFRSF1A-214ENST00000543048 ARL17AQ8IVW1 177 aa5.79□□□□□ -1.48
TNFRSF1A-214ENST00000543048 TMEM126AQ9H061 195 aa5.79□□□□□ -1.48
TNFRSF1A-214ENST00000543048 CRYGAP11844 174 aa5.78□□□□□ -1.48
TNFRSF1A-214ENST00000543048 FAM19A1Q7Z5A9 133 aa5.78□□□□□ -1.48
TNFRSF1A-214ENST00000543048 NHP2Q9NX24 153 aaKnown RBP5.78□□□□□ -1.48
TNFRSF1A-214ENST00000543048 LRP2P98164 4655 aa5.78□□□□□ -1.48
TNFRSF1A-214ENST00000543048 A0A0B4J2C4 111 aa5.77□□□□□ -1.49
TNFRSF1A-214ENST00000543048 A0A1B0GWB2 263 aa5.77□□□□□ -1.49
TNFRSF1A-214ENST00000543048 COL5A1-AS1Q5SY13 56 aa5.77□□□□□ -1.49
TNFRSF1A-214ENST00000543048 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
TNFRSF1A-214ENST00000543048 K7ERJ3 54 aa5.76□□□□□ -1.49
TNFRSF1A-214ENST00000543048 NDUFC2O95298 119 aa5.76□□□□□ -1.49
TNFRSF1A-214ENST00000543048 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
TNFRSF1A-214ENST00000543048 A0A087X002 238 aa5.75□□□□□ -1.49
TNFRSF1A-214ENST00000543048 CFC1BP0CG36 223 aa5.75□□□□□ -1.49
TNFRSF1A-214ENST00000543048 CFC1P0CG37 223 aa5.75□□□□□ -1.49
TNFRSF1A-214ENST00000543048 PRLHP81277 87 aa5.75□□□□□ -1.49
TNFRSF1A-214ENST00000543048 FAM229BQ4G0N7 80 aa5.75□□□□□ -1.49
TNFRSF1A-214ENST00000543048 TYMSOSQ8TAI1 123 aa5.75□□□□□ -1.49
TNFRSF1A-214ENST00000543048 RAB37Q96AX2 223 aa5.75□□□□□ -1.49
TNFRSF1A-214ENST00000543048 ANAPC11Q9NYG5 84 aa5.75□□□□□ -1.49
TNFRSF1A-214ENST00000543048 PRYO14603 147 aa5.74□□□□□ -1.49
TNFRSF1A-214ENST00000543048 KCNQ1DNQ9H478 68 aa5.74□□□□□ -1.49
TNFRSF1A-214ENST00000543048 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
TNFRSF1A-214ENST00000543048 TRAV13-2A0A0B4J235 113 aa5.73□□□□□ -1.49
TNFRSF1A-214ENST00000543048 NCR3O14931 201 aa5.73□□□□□ -1.49
TNFRSF1A-214ENST00000543048 TRBV10-3A0A0K0K1G6 114 aa5.72□□□□□ -1.49
TNFRSF1A-214ENST00000543048 TRBV10-2A0A0K0K1G8 114 aa5.72□□□□□ -1.49
TNFRSF1A-214ENST00000543048 KRTAP13-2Q52LG2 175 aa5.72□□□□□ -1.49
TNFRSF1A-214ENST00000543048 LINC00337Q8N6G1 96 aa5.72□□□□□ -1.49
TNFRSF1A-214ENST00000543048 HIGD2AQ9BW72 106 aa5.72□□□□□ -1.49
TNFRSF1A-214ENST00000543048 TAX1BP3O14907 124 aa5.71□□□□□ -1.5
TNFRSF1A-214ENST00000543048 TSPAN13O95857 204 aa5.71□□□□□ -1.5
TNFRSF1A-214ENST00000543048 SPRR1AP35321 89 aa5.71□□□□□ -1.5
TNFRSF1A-214ENST00000543048 LPAP08519 4548 aa5.7□□□□□ -1.5
TNFRSF1A-214ENST00000543048 ETDCA0A1B0GVM5 59 aa5.7□□□□□ -1.5
TNFRSF1A-214ENST00000543048 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
TNFRSF1A-214ENST00000543048 Q1RN00 199 aa5.7□□□□□ -1.5
TNFRSF1A-214ENST00000543048 OR13C6PQ8NH95 151 aa5.7□□□□□ -1.5
TNFRSF1A-214ENST00000543048 SMCR5Q8TEV8 140 aa5.7□□□□□ -1.5
TNFRSF1A-214ENST00000543048 H7C2G1 150 aa5.69□□□□□ -1.5
TNFRSF1A-214ENST00000543048 PRR4Q16378 134 aa5.69□□□□□ -1.5
TNFRSF1A-214ENST00000543048 S100A7L2Q5SY68 101 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms