RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 INAFM2P0DMQ5 153 aa7.47□□□□□ -1.21
DDX55-210ENST00000543016 SPRR1AP35321 89 aa7.47□□□□□ -1.21
DDX55-210ENST00000543016 LINC00337Q8N6G1 96 aa7.47□□□□□ -1.21
DDX55-210ENST00000543016 OR13C6PQ8NH95 151 aa7.47□□□□□ -1.21
DDX55-210ENST00000543016 VPS13BQ7Z7G8 4022 aa7.46□□□□□ -1.21
DDX55-210ENST00000543016 TMEM238LA0A1B0GVL6 79 aa7.46□□□□□ -1.22
DDX55-210ENST00000543016 A4D1N5 150 aa7.46□□□□□ -1.22
DDX55-210ENST00000543016 H0Y9J4 135 aa7.46□□□□□ -1.22
DDX55-210ENST00000543016 XP32Q5T750 250 aa7.46□□□□□ -1.22
DDX55-210ENST00000543016 DIRC1Q969H9 104 aa7.46□□□□□ -1.22
DDX55-210ENST00000543016 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
DDX55-210ENST00000543016 UBE2AP49459 152 aa7.45□□□□□ -1.22
DDX55-210ENST00000543016 HINT1P49773 126 aaPredicted RBP7.45□□□□□ -1.22
DDX55-210ENST00000543016 HSD52Q0P140 79 aa7.45□□□□□ -1.22
DDX55-210ENST00000543016 CEND1Q8N111 149 aa7.45□□□□□ -1.22
DDX55-210ENST00000543016 C12orf57Q99622 126 aa7.45□□□□□ -1.22
DDX55-210ENST00000543016 KRTAP4-5Q9BYR2 181 aa7.45□□□□□ -1.22
DDX55-210ENST00000543016 ETDCA0A1B0GVM5 59 aa7.44□□□□□ -1.22
DDX55-210ENST00000543016 A6NDN8 102 aa7.44□□□□□ -1.22
DDX55-210ENST00000543016 HNRNPA3P51991 378 aaKnown RBP7.44□□□□□ -1.22
DDX55-210ENST00000543016 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
DDX55-210ENST00000543016 KRTAP4-16G5E9R7 235 aaPredicted RBP7.43□□□□□ -1.22
DDX55-210ENST00000543016 TSTD3H0UI37 97 aa7.43□□□□□ -1.22
DDX55-210ENST00000543016 ZNF73O43830 326 aaPredicted RBP7.43□□□□□ -1.22
DDX55-210ENST00000543016 KRTAP13-1Q8IUC0 172 aa7.43□□□□□ -1.22
DDX55-210ENST00000543016 SRRM2Q9UQ35 2752 aaKnown RBP7.42□□□□□ -1.22
DDX55-210ENST00000543016 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
DDX55-210ENST00000543016 TRBV7-6A0A0J9YX20 115 aa7.41□□□□□ -1.22
DDX55-210ENST00000543016 PRO1933Q9H354 126 aa7.41□□□□□ -1.22
DDX55-210ENST00000543016 B5MCH6 92 aa7.4□□□□□ -1.22
DDX55-210ENST00000543016 RAB37Q96AX2 223 aa7.4□□□□□ -1.22
DDX55-210ENST00000543016 CFC1BP0CG36 223 aa7.39□□□□□ -1.23
DDX55-210ENST00000543016 CFC1P0CG37 223 aa7.39□□□□□ -1.23
DDX55-210ENST00000543016 PRLHP81277 87 aa7.39□□□□□ -1.23
DDX55-210ENST00000543016 Q6ZRX8 168 aa7.39□□□□□ -1.23
DDX55-210ENST00000543016 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
DDX55-210ENST00000543016 OXTP01178 125 aa7.38□□□□□ -1.23
DDX55-210ENST00000543016 A0A1B0GWB2 263 aa7.37□□□□□ -1.23
DDX55-210ENST00000543016 M0R143 59 aa7.37□□□□□ -1.23
DDX55-210ENST00000543016 RPL13AP40429 203 aaKnown RBP7.37□□□□□ -1.23
DDX55-210ENST00000543016 FXYD2P54710 66 aa7.37□□□□□ -1.23
DDX55-210ENST00000543016 VAMP3Q15836 100 aa7.37□□□□□ -1.23
DDX55-210ENST00000543016 C6orf99Q4VX62 202 aa7.37□□□□□ -1.23
DDX55-210ENST00000543016 SMIM11BQ8TCY0 68 aa7.37□□□□□ -1.23
DDX55-210ENST00000543016 PRO1854Q9UHT4 67 aa7.37□□□□□ -1.23
DDX55-210ENST00000543016 COX7BP24311 80 aa7.36□□□□□ -1.23
DDX55-210ENST00000543016 ELOF1P60002 83 aaKnown RBP7.36□□□□□ -1.23
DDX55-210ENST00000543016 HIGD2AQ9BW72 106 aa7.36□□□□□ -1.23
DDX55-210ENST00000543016 DHRS4-AS1Q9P1J3 65 aa7.36□□□□□ -1.23
DDX55-210ENST00000543016 ZNF706Q9Y5V0 76 aaPredicted RBP7.36□□□□□ -1.23
DDX55-210ENST00000543016 KRTAP29-1A8MX34 341 aaPredicted RBP7.35□□□□□ -1.23
DDX55-210ENST00000543016 CTAG1AP78358 180 aa7.34□□□□□ -1.23
DDX55-210ENST00000543016 BVES-AS1Q5T3Y7 98 aa7.34□□□□□ -1.23
DDX55-210ENST00000543016 SMCR5Q8TEV8 140 aa7.34□□□□□ -1.23
DDX55-210ENST00000543016 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
DDX55-210ENST00000543016 LINC01600Q96MT4 127 aa7.33□□□□□ -1.24
DDX55-210ENST00000543016 FAM229BQ4G0N7 80 aa7.32□□□□□ -1.24
DDX55-210ENST00000543016 Q9BRP9 147 aa7.32□□□□□ -1.24
DDX55-210ENST00000543016 SLC25A20O43772 301 aa7.31□□□□□ -1.24
DDX55-210ENST00000543016 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
DDX55-210ENST00000543016 Q1RN00 199 aa7.31□□□□□ -1.24
DDX55-210ENST00000543016 H0YGX0 51 aa7.3□□□□□ -1.24
DDX55-210ENST00000543016 H7C2G1 150 aa7.3□□□□□ -1.24
DDX55-210ENST00000543016 SNCGO76070 127 aa7.3□□□□□ -1.24
DDX55-210ENST00000543016 SPRR4Q96PI1 79 aa7.3□□□□□ -1.24
DDX55-210ENST00000543016 ABCA13Q86UQ4 5058 aa7.3□□□□□ -1.24
DDX55-210ENST00000543016 CRYGAP11844 174 aa7.28□□□□□ -1.24
DDX55-210ENST00000543016 PKHD1L1Q86WI1 4243 aa7.28□□□□□ -1.24
DDX55-210ENST00000543016 ERC2-IT1O76042 136 aa7.27□□□□□ -1.25
DDX55-210ENST00000543016 COX6CP09669 75 aa7.27□□□□□ -1.25
DDX55-210ENST00000543016 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
DDX55-210ENST00000543016 LINC00575Q6W349 94 aa7.27□□□□□ -1.25
DDX55-210ENST00000543016 A0A1B0GX51 115 aa7.26□□□□□ -1.25
DDX55-210ENST00000543016 K7ERJ3 54 aa7.26□□□□□ -1.25
DDX55-210ENST00000543016 hADV29S1A0JD25 119 aa7.25□□□□□ -1.25
DDX55-210ENST00000543016 SPRR1BP22528 89 aa7.25□□□□□ -1.25
DDX55-210ENST00000543016 KRTAP10-8P60410 259 aa7.25□□□□□ -1.25
DDX55-210ENST00000543016 GAGE2AQ6NT46 116 aa7.25□□□□□ -1.25
DDX55-210ENST00000543016 TSPAN13O95857 204 aa7.24□□□□□ -1.25
DDX55-210ENST00000543016 PSMB2P49721 201 aa7.24□□□□□ -1.25
DDX55-210ENST00000543016 TEX49A0A1B0GTD5 131 aa7.23□□□□□ -1.25
DDX55-210ENST00000543016 TRIAP1O43715 76 aa7.23□□□□□ -1.25
DDX55-210ENST00000543016 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.23□□□□□ -1.25
DDX55-210ENST00000543016 PRR26Q8N8Z3 221 aa7.23□□□□□ -1.25
DDX55-210ENST00000543016 DMBT1Q9UGM3 2413 aaPredicted RBP7.23□□□□□ -1.25
DDX55-210ENST00000543016 IGLV5-48A0A075B6I7 105 aa7.22□□□□□ -1.25
DDX55-210ENST00000543016 MT1HL1P0DM35 61 aa7.22□□□□□ -1.25
DDX55-210ENST00000543016 OCIAD2Q56VL3 154 aa7.22□□□□□ -1.25
DDX55-210ENST00000543016 ST20-AS1Q8NBB2 130 aa7.22□□□□□ -1.25
DDX55-210ENST00000543016 MYCBP2O75592 4640 aa7.21□□□□□ -1.25
DDX55-210ENST00000543016 A0A087X002 238 aa7.21□□□□□ -1.26
DDX55-210ENST00000543016 PPDPFLQ8WWR9 84 aa7.21□□□□□ -1.26
DDX55-210ENST00000543016 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
DDX55-210ENST00000543016 BATFQ16520 125 aa7.2□□□□□ -1.26
DDX55-210ENST00000543016 TYMSOSQ8TAI1 123 aa7.2□□□□□ -1.26
DDX55-210ENST00000543016 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
DDX55-210ENST00000543016 ANAPC11Q9NYG5 84 aa7.2□□□□□ -1.26
DDX55-210ENST00000543016 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
DDX55-210ENST00000543016 H3BQ85 93 aa7.19□□□□□ -1.26
DDX55-210ENST00000543016 SCGB1C2P0DMR2 95 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms