RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 IGLV9-49A0A0B4J1Y8 123 aa10.84□□□□□ -0.67
VARS2-212ENST00000542001 SPINK6Q6UWN8 80 aa10.83□□□□□ -0.68
VARS2-212ENST00000542001 FAM168BA1KXE4 195 aa10.82□□□□□ -0.68
VARS2-212ENST00000542001 Q6ZRP5 223 aa10.82□□□□□ -0.68
VARS2-212ENST00000542001 MP68P56378 58 aa10.81□□□□□ -0.68
VARS2-212ENST00000542001 KRTAP10-11P60412 298 aa10.81□□□□□ -0.68
VARS2-212ENST00000542001 C22orf24Q9Y442 160 aa10.8□□□□□ -0.68
VARS2-212ENST00000542001 ST20-AS1Q8NBB2 130 aa10.8□□□□□ -0.68
VARS2-212ENST00000542001 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
VARS2-212ENST00000542001 FAM19A3Q7Z5A8 133 aa10.8□□□□□ -0.68
VARS2-212ENST00000542001 LINC00167Q96N53 147 aa10.79□□□□□ -0.68
VARS2-212ENST00000542001 NDUFB1O75438 58 aa10.79□□□□□ -0.68
VARS2-212ENST00000542001 B9D2Q9BPU9 175 aa10.79□□□□□ -0.68
VARS2-212ENST00000542001 A0A087WSZ3 146 aa10.78□□□□□ -0.68
VARS2-212ENST00000542001 A0A0G2JQZ4 141 aa10.78□□□□□ -0.68
VARS2-212ENST00000542001 A0A1W2PNN7 141 aa10.78□□□□□ -0.68
VARS2-212ENST00000542001 MRPL55Q7Z7F7 128 aaKnown RBP10.78□□□□□ -0.68
VARS2-212ENST00000542001 LINC01561Q8N1V8 128 aa10.78□□□□□ -0.68
VARS2-212ENST00000542001 C2orf48Q96LS8 159 aa10.76□□□□□ -0.69
VARS2-212ENST00000542001 LINC01556Q5JQF7 62 aa10.75□□□□□ -0.69
VARS2-212ENST00000542001 CHTF8P0CG12 524 aa10.75□□□□□ -0.69
VARS2-212ENST00000542001 REG3GQ6UW15 175 aa10.75□□□□□ -0.69
VARS2-212ENST00000542001 LINC00588Q9Y4M8 146 aa10.75□□□□□ -0.69
VARS2-212ENST00000542001 Q6ZQT0 140 aa10.75□□□□□ -0.69
VARS2-212ENST00000542001 SERTAD4-AS1Q5TG53 156 aa10.74□□□□□ -0.69
VARS2-212ENST00000542001 TRAV7A0A075B6U4 112 aa10.74□□□□□ -0.69
VARS2-212ENST00000542001 CRYGAP11844 174 aa10.73□□□□□ -0.69
VARS2-212ENST00000542001 FBN1P35555 2871 aaKnown RBP10.73□□□□□ -0.69
VARS2-212ENST00000542001 VPREB1P12018 145 aa10.73□□□□□ -0.69
VARS2-212ENST00000542001 CASC10Q5T4H9 136 aa10.73□□□□□ -0.69
VARS2-212ENST00000542001 VWFP04275 2813 aa10.72□□□□□ -0.69
VARS2-212ENST00000542001 LY6G6CO95867 125 aa10.71□□□□□ -0.69
VARS2-212ENST00000542001 IGKV4-1P06312 121 aa10.71□□□□□ -0.69
VARS2-212ENST00000542001 C14orf177Q52M58 125 aa10.71□□□□□ -0.69
VARS2-212ENST00000542001 PDZD2O15018 2839 aa10.71□□□□□ -0.7
VARS2-212ENST00000542001 LINC00612Q8N6U2 182 aa10.7□□□□□ -0.7
VARS2-212ENST00000542001 TENM1Q9UKZ4 2725 aa10.7□□□□□ -0.7
VARS2-212ENST00000542001 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
VARS2-212ENST00000542001 Q8NDZ9 215 aa10.69□□□□□ -0.7
VARS2-212ENST00000542001 IGLV6-57P01721 117 aa10.69□□□□□ -0.7
VARS2-212ENST00000542001 TM2D3Q9BRN9 247 aa10.69□□□□□ -0.7
VARS2-212ENST00000542001 Q9BRP9 147 aa10.68□□□□□ -0.7
VARS2-212ENST00000542001 C15orf56Q8N910 161 aa10.67□□□□□ -0.7
VARS2-212ENST00000542001 PRR34Q9NV39 138 aa10.67□□□□□ -0.7
VARS2-212ENST00000542001 LINC00208Q96KT6 92 aa10.67□□□□□ -0.7
VARS2-212ENST00000542001 SMIM26A0A096LP01 95 aa10.66□□□□□ -0.7
VARS2-212ENST00000542001 TMEM254Q8TBM7 123 aa10.66□□□□□ -0.7
VARS2-212ENST00000542001 SPTSSBQ8NFR3 76 aa10.65□□□□□ -0.7
VARS2-212ENST00000542001 PHF5AQ7RTV0 110 aaKnown RBP10.65□□□□□ -0.7
VARS2-212ENST00000542001 V9GYY9 64 aa10.65□□□□□ -0.7
VARS2-212ENST00000542001 SMIM29Q86T20 159 aa10.64□□□□□ -0.71
VARS2-212ENST00000542001 C1orf195Q5TG92 126 aa10.64□□□□□ -0.71
VARS2-212ENST00000542001 SERP1Q9Y6X1 66 aa10.64□□□□□ -0.71
VARS2-212ENST00000542001 TENM4Q6N022 2769 aa10.6□□□□□ -0.71
VARS2-212ENST00000542001 RPL37AP61513 92 aaKnown RBP10.6□□□□□ -0.71
VARS2-212ENST00000542001 PRYO14603 147 aa10.6□□□□□ -0.71
VARS2-212ENST00000542001 ZFHX3Q15911 3703 aa10.6□□□□□ -0.71
VARS2-212ENST00000542001 Q6ZRX8 168 aa10.59□□□□□ -0.71
VARS2-212ENST00000542001 NBPF19A0A087WUL8 3843 aa10.59□□□□□ -0.71
VARS2-212ENST00000542001 BSNQ9UPA5 3926 aa10.58□□□□□ -0.72
VARS2-212ENST00000542001 DNAH10OSP0CZ25 163 aa10.58□□□□□ -0.72
VARS2-212ENST00000542001 OTOGQ6ZRI0 2925 aa10.58□□□□□ -0.72
VARS2-212ENST00000542001 K7EIL1 84 aa10.58□□□□□ -0.72
VARS2-212ENST00000542001 LINC00528Q8N1L1 170 aa10.58□□□□□ -0.72
VARS2-212ENST00000542001 RPS28P62857 69 aaKnown RBP10.57□□□□□ -0.72
VARS2-212ENST00000542001 PCOTHQ58A44 107 aa10.57□□□□□ -0.72
VARS2-212ENST00000542001 TRBV7-6A0A0J9YX20 115 aa10.57□□□□□ -0.72
VARS2-212ENST00000542001 GVQW2A0A096LPI5 108 aaPredicted RBP10.56□□□□□ -0.72
VARS2-212ENST00000542001 MDFIQ99750 246 aa10.56□□□□□ -0.72
VARS2-212ENST00000542001 PSPHP1O15172 72 aa10.56□□□□□ -0.72
VARS2-212ENST00000542001 LINC00476Q8WZB0 136 aa10.56□□□□□ -0.72
VARS2-212ENST00000542001 TENM3Q9P273 2699 aa10.56□□□□□ -0.72
VARS2-212ENST00000542001 H3BNG1 76 aa10.56□□□□□ -0.72
VARS2-212ENST00000542001 CXCL6P80162 114 aa10.56□□□□□ -0.72
VARS2-212ENST00000542001 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
VARS2-212ENST00000542001 IGHV6-1A0A0B4J1U7 121 aa10.55□□□□□ -0.72
VARS2-212ENST00000542001 RETNLBQ9BQ08 111 aa10.55□□□□□ -0.72
VARS2-212ENST00000542001 LOC110117498A0A087WWA1 95 aa10.54□□□□□ -0.72
VARS2-212ENST00000542001 ERC2-IT1O76042 136 aa10.54□□□□□ -0.72
VARS2-212ENST00000542001 CYSTM1Q9H1C7 97 aa10.54□□□□□ -0.72
VARS2-212ENST00000542001 Q8N377 158 aa10.53□□□□□ -0.72
VARS2-212ENST00000542001 PRO0628Q9UI54 55 aa10.53□□□□□ -0.72
VARS2-212ENST00000542001 NDUFC1O43677 76 aa10.52□□□□□ -0.73
VARS2-212ENST00000542001 CASC2Q6XLA1 102 aa10.52□□□□□ -0.73
VARS2-212ENST00000542001 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
VARS2-212ENST00000542001 LINC00336Q6ZUF6 198 aa10.51□□□□□ -0.73
VARS2-212ENST00000542001 Q8NBF4 154 aa10.5□□□□□ -0.73
VARS2-212ENST00000542001 EPM2AB3EWF7 344 aa10.49□□□□□ -0.73
VARS2-212ENST00000542001 C4orf48Q5BLP8 95 aa10.49□□□□□ -0.73
VARS2-212ENST00000542001 CHKB-CPT1BH3BT56 60 aa10.48□□□□□ -0.73
VARS2-212ENST00000542001 HCG22E2RYF7 251 aa10.48□□□□□ -0.73
VARS2-212ENST00000542001 K7EQZ3 153 aa10.48□□□□□ -0.73
VARS2-212ENST00000542001 IGLV1-50A0A075B6I6 118 aa10.46□□□□□ -0.73
VARS2-212ENST00000542001 IGLV5-52A0A0A0MRZ9 124 aa10.46□□□□□ -0.73
VARS2-212ENST00000542001 KCNQ1DNQ9H478 68 aa10.46□□□□□ -0.74
VARS2-212ENST00000542001 NUPR2A6NF83 97 aa10.45□□□□□ -0.74
VARS2-212ENST00000542001 TRBV7-4A0A0J9YYF1 115 aa10.44□□□□□ -0.74
VARS2-212ENST00000542001 ANAPC11Q9NYG5 84 aa10.44□□□□□ -0.74
VARS2-212ENST00000542001 H0Y9P7 68 aa10.43□□□□□ -0.74
VARS2-212ENST00000542001 PKD1L1Q8TDX9 2849 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms