RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 UNQ6190/PRO20217Q6UXQ8 127 aa10.11□□□□□ -0.79
CLPTM1-202ENST00000541297 DNAH10Q8IVF4 4471 aa10.1□□□□□ -0.79
CLPTM1-202ENST00000541297 LINC00575Q6W349 94 aa10.09□□□□□ -0.79
CLPTM1-202ENST00000541297 NUPR2A6NF83 97 aa10.09□□□□□ -0.79
CLPTM1-202ENST00000541297 C20orf197Q8N268 126 aa10.08□□□□□ -0.8
CLPTM1-202ENST00000541297 C15orf56Q8N910 161 aa10.08□□□□□ -0.8
CLPTM1-202ENST00000541297 M0R2N4 97 aa10.08□□□□□ -0.8
CLPTM1-202ENST00000541297 RBM3P98179 157 aaKnown RBP10.08□□□□□ -0.8
CLPTM1-202ENST00000541297 Q6ZQT0 140 aa10.08□□□□□ -0.8
CLPTM1-202ENST00000541297 TRBV10-3A0A0K0K1G6 114 aa10.07□□□□□ -0.8
CLPTM1-202ENST00000541297 ZNF561-AS1K7EIQ3 104 aa10.07□□□□□ -0.8
CLPTM1-202ENST00000541297 CASC10Q5T4H9 136 aa10.06□□□□□ -0.8
CLPTM1-202ENST00000541297 KRTAP1-5Q9BYS1 174 aa10.06□□□□□ -0.8
CLPTM1-202ENST00000541297 LAMTOR3Q9UHA4 124 aa10.06□□□□□ -0.8
CLPTM1-202ENST00000541297 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
CLPTM1-202ENST00000541297 C6orf48Q9UBA6 75 aa10.04□□□□□ -0.8
CLPTM1-202ENST00000541297 LINC00336Q6ZUF6 198 aa10.03□□□□□ -0.8
CLPTM1-202ENST00000541297 PKIGQ9Y2B9 76 aa10.03□□□□□ -0.8
CLPTM1-202ENST00000541297 LOC110117498A0A087WWA1 95 aa10.03□□□□□ -0.8
CLPTM1-202ENST00000541297 NDUFC2-KCTD14E9PQ53 114 aa10.03□□□□□ -0.8
CLPTM1-202ENST00000541297 LINC01547P58512 204 aaPredicted RBP10.03□□□□□ -0.8
CLPTM1-202ENST00000541297 HAMPP81172 84 aa10.03□□□□□ -0.8
CLPTM1-202ENST00000541297 Q6ZRU5 148 aa10.01□□□□□ -0.81
CLPTM1-202ENST00000541297 Q6ZQY7 126 aa10.01□□□□□ -0.81
CLPTM1-202ENST00000541297 Q6ZVQ6 151 aa10.01□□□□□ -0.81
CLPTM1-202ENST00000541297 RMI2Q96E14 147 aa10□□□□□ -0.81
CLPTM1-202ENST00000541297 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
CLPTM1-202ENST00000541297 IGLV6-57P01721 117 aa9.99□□□□□ -0.81
CLPTM1-202ENST00000541297 TRAV7A0A075B6U4 112 aa9.98□□□□□ -0.81
CLPTM1-202ENST00000541297 FAM236DA0A1B0GTK5 79 aa9.98□□□□□ -0.81
CLPTM1-202ENST00000541297 FAM236CP0DP71 79 aa9.98□□□□□ -0.81
CLPTM1-202ENST00000541297 VPS13DQ5THJ4 4388 aa9.98□□□□□ -0.81
CLPTM1-202ENST00000541297 H7BZZ5 65 aa9.98□□□□□ -0.81
CLPTM1-202ENST00000541297 XAGE1AQ9HD64 81 aa9.97□□□□□ -0.81
CLPTM1-202ENST00000541297 SYCNQ0VAF6 134 aa9.95□□□□□ -0.82
CLPTM1-202ENST00000541297 SNURFQ9Y675 71 aa9.95□□□□□ -0.82
CLPTM1-202ENST00000541297 BCE1O60756 84 aa9.95□□□□□ -0.82
CLPTM1-202ENST00000541297 PSCAO43653 123 aa9.94□□□□□ -0.82
CLPTM1-202ENST00000541297 KMT2AQ03164 3969 aa9.94□□□□□ -0.82
CLPTM1-202ENST00000541297 MUC7Q8TAX7 377 aa9.94□□□□□ -0.82
CLPTM1-202ENST00000541297 PRO0628Q9UI54 55 aa9.94□□□□□ -0.82
CLPTM1-202ENST00000541297 NBDYA0A0U1RRE5 68 aa9.93□□□□□ -0.82
CLPTM1-202ENST00000541297 CXCL6P80162 114 aa9.93□□□□□ -0.82
CLPTM1-202ENST00000541297 SCXQ7RTU7 201 aa9.93□□□□□ -0.82
CLPTM1-202ENST00000541297 PDE6GP18545 87 aa9.92□□□□□ -0.82
CLPTM1-202ENST00000541297 KLKP1Q107X0 134 aa9.92□□□□□ -0.82
CLPTM1-202ENST00000541297 DIRC1Q969H9 104 aa9.91□□□□□ -0.82
CLPTM1-202ENST00000541297 Q6ZRP5 223 aa9.91□□□□□ -0.82
CLPTM1-202ENST00000541297 F8WDY8 70 aa9.9□□□□□ -0.82
CLPTM1-202ENST00000541297 SERP1Q9Y6X1 66 aa9.9□□□□□ -0.82
CLPTM1-202ENST00000541297 EPM2AB3EWF7 344 aa9.9□□□□□ -0.83
CLPTM1-202ENST00000541297 TRBV7-4A0A0J9YYF1 115 aa9.89□□□□□ -0.83
CLPTM1-202ENST00000541297 ZNF73O43830 326 aaPredicted RBP9.89□□□□□ -0.83
CLPTM1-202ENST00000541297 A0A0U1RQV1 116 aa9.88□□□□□ -0.83
CLPTM1-202ENST00000541297 F8WEM9 126 aa9.88□□□□□ -0.83
CLPTM1-202ENST00000541297 H3BQ85 93 aa9.88□□□□□ -0.83
CLPTM1-202ENST00000541297 COX7BP24311 80 aa9.88□□□□□ -0.83
CLPTM1-202ENST00000541297 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.88□□□□□ -0.83
CLPTM1-202ENST00000541297 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.85□□□□□ -0.83
CLPTM1-202ENST00000541297 ELOF1P60002 83 aaKnown RBP9.85□□□□□ -0.83
CLPTM1-202ENST00000541297 WWC2-AS2Q96NR7 200 aa9.85□□□□□ -0.83
CLPTM1-202ENST00000541297 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
CLPTM1-202ENST00000541297 SEC61GP60059 68 aa9.84□□□□□ -0.84
CLPTM1-202ENST00000541297 LY6G6CO95867 125 aa9.83□□□□□ -0.84
CLPTM1-202ENST00000541297 VPREB1P12018 145 aa9.82□□□□□ -0.84
CLPTM1-202ENST00000541297 Q6ZRN7 208 aaPredicted RBP9.82□□□□□ -0.84
CLPTM1-202ENST00000541297 FP248Q71RG6 208 aaPredicted RBP9.82□□□□□ -0.84
CLPTM1-202ENST00000541297 TRBV7-6A0A0J9YX20 115 aa9.82□□□□□ -0.84
CLPTM1-202ENST00000541297 Q8N9L7 120 aa9.82□□□□□ -0.84
CLPTM1-202ENST00000541297 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
CLPTM1-202ENST00000541297 TLX1NBP0CAT3 122 aa9.81□□□□□ -0.84
CLPTM1-202ENST00000541297 NREPQ16612 68 aa9.81□□□□□ -0.84
CLPTM1-202ENST00000541297 LRCOL1A6NCL2 159 aa9.8□□□□□ -0.84
CLPTM1-202ENST00000541297 BPY2O14599 106 aa9.8□□□□□ -0.84
CLPTM1-202ENST00000541297 BRK1Q8WUW1 75 aa9.8□□□□□ -0.84
CLPTM1-202ENST00000541297 FAM168BA1KXE4 195 aa9.79□□□□□ -0.84
CLPTM1-202ENST00000541297 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
CLPTM1-202ENST00000541297 LINC00528Q8N1L1 170 aa9.78□□□□□ -0.84
CLPTM1-202ENST00000541297 NDUFC1O43677 76 aa9.77□□□□□ -0.84
CLPTM1-202ENST00000541297 SMIM26A0A096LP01 95 aa9.77□□□□□ -0.85
CLPTM1-202ENST00000541297 M0R378 163 aa9.77□□□□□ -0.85
CLPTM1-202ENST00000541297 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
CLPTM1-202ENST00000541297 C14orf177Q52M58 125 aa9.77□□□□□ -0.85
CLPTM1-202ENST00000541297 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.85
CLPTM1-202ENST00000541297 Q6ZR54 194 aa9.76□□□□□ -0.85
CLPTM1-202ENST00000541297 V9GYY9 64 aa9.76□□□□□ -0.85
CLPTM1-202ENST00000541297 IGKV2-24A0A0C4DH68 120 aa9.75□□□□□ -0.85
CLPTM1-202ENST00000541297 IGKV4-1P06312 121 aa9.75□□□□□ -0.85
CLPTM1-202ENST00000541297 NKAPP1Q8N9T2 125 aa9.75□□□□□ -0.85
CLPTM1-202ENST00000541297 LINC00476Q8WZB0 136 aa9.75□□□□□ -0.85
CLPTM1-202ENST00000541297 C1orf195Q5TG92 126 aa9.74□□□□□ -0.85
CLPTM1-202ENST00000541297 A0A096LNI7 61 aa9.74□□□□□ -0.85
CLPTM1-202ENST00000541297 C3orf84H3BNL1 204 aa9.73□□□□□ -0.85
CLPTM1-202ENST00000541297 FUSP35637 526 aaKnown RBP eCLIP9.73□□□□□ -0.85
CLPTM1-202ENST00000541297 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
CLPTM1-202ENST00000541297 HECTD4Q9Y4D8 3996 aa9.72□□□□□ -0.85
CLPTM1-202ENST00000541297 HYDINQ4G0P3 5121 aa9.71□□□□□ -0.85
CLPTM1-202ENST00000541297 C7orf33Q8WU49 177 aa9.71□□□□□ -0.85
CLPTM1-202ENST00000541297 DEFB105AQ8NG35 78 aa9.71□□□□□ -0.86
CLPTM1-202ENST00000541297 OCR1Q9BZK8 76 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms