RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 A0A1B0GWB2 263 aa4.23□□□□□ -1.73
CLTCL1-206ENST00000540896 GAGE10A6NGK3 116 aa4.23□□□□□ -1.73
CLTCL1-206ENST00000540896 M0R378 163 aa4.23□□□□□ -1.73
CLTCL1-206ENST00000540896 IGKV2D-28P01615 120 aa4.23□□□□□ -1.73
CLTCL1-206ENST00000540896 PSMB2P49721 201 aa4.23□□□□□ -1.73
CLTCL1-206ENST00000540896 SERTAD4-AS1Q5TG53 156 aa4.23□□□□□ -1.73
CLTCL1-206ENST00000540896 LINC00337Q8N6G1 96 aa4.23□□□□□ -1.73
CLTCL1-206ENST00000540896 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
CLTCL1-206ENST00000540896 VPREB1P12018 145 aa4.22□□□□□ -1.73
CLTCL1-206ENST00000540896 LBHQ53QV2 105 aaPredicted RBP4.22□□□□□ -1.73
CLTCL1-206ENST00000540896 Q8NDZ9 215 aa4.22□□□□□ -1.73
CLTCL1-206ENST00000540896 TMEM126AQ9H061 195 aa4.22□□□□□ -1.73
CLTCL1-206ENST00000540896 C22orf24Q9Y442 160 aa4.22□□□□□ -1.73
CLTCL1-206ENST00000540896 A0A1W2PNN7 141 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 PANO1I0J062 215 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 M0QXV9 152 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 TAX1BP3O14907 124 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 TRIAP1O43715 76 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 SCGB1C2P0DMR2 95 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 SPACA4Q8TDM5 124 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 C7orf33Q8WU49 177 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 NAA38Q9BRA0 125 aaKnown RBP4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 CBY1Q9Y3M2 126 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 PKHD1P08F94 4074 aa4.21□□□□□ -1.74
CLTCL1-206ENST00000540896 IGLV5-37A0A075B6J1 123 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 A0A087WYN8 130 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 TRBV10-3A0A0K0K1G6 114 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 RPL37AP8A6NKH3 93 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 H3BUT2 72 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 TSPAN13O95857 204 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 COX6CP09669 75 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 KRTAP10-1P60331 282 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 UBE2BP63146 152 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 LINC00167Q96N53 147 aa4.2□□□□□ -1.74
CLTCL1-206ENST00000540896 TRAV23DV6A0A075B6W5 121 aa4.19□□□□□ -1.74
CLTCL1-206ENST00000540896 IGLV6-57P01721 117 aa4.19□□□□□ -1.74
CLTCL1-206ENST00000540896 VAMP3Q15836 100 aa4.19□□□□□ -1.74
CLTCL1-206ENST00000540896 PHF5AQ7RTV0 110 aaKnown RBP4.19□□□□□ -1.74
CLTCL1-206ENST00000540896 KRTAP7-1Q8IUC3 87 aa4.19□□□□□ -1.74
CLTCL1-206ENST00000540896 SMIM11BQ8TCY0 68 aa4.19□□□□□ -1.74
CLTCL1-206ENST00000540896 DNAH5Q8TE73 4624 aa4.19□□□□□ -1.74
CLTCL1-206ENST00000540896 IGLV1-50A0A075B6I6 118 aa4.18□□□□□ -1.74
CLTCL1-206ENST00000540896 FABP2P12104 132 aa4.18□□□□□ -1.74
CLTCL1-206ENST00000540896 LYRM7Q5U5X0 104 aa4.18□□□□□ -1.74
CLTCL1-206ENST00000540896 A0A1W2PPM0 123 aa4.17□□□□□ -1.74
CLTCL1-206ENST00000540896 ZNF73O43830 326 aaPredicted RBP4.17□□□□□ -1.74
CLTCL1-206ENST00000540896 SNCGO76070 127 aa4.17□□□□□ -1.74
CLTCL1-206ENST00000540896 RPL28P46779 137 aaKnown RBP4.17□□□□□ -1.74
CLTCL1-206ENST00000540896 C6orf99Q4VX62 202 aa4.17□□□□□ -1.74
CLTCL1-206ENST00000540896 DIRC1Q969H9 104 aa4.17□□□□□ -1.74
CLTCL1-206ENST00000540896 KCNQ1DNQ9H478 68 aa4.17□□□□□ -1.74
CLTCL1-206ENST00000540896 PLAC8Q9NZF1 115 aa4.17□□□□□ -1.74
CLTCL1-206ENST00000540896 RYR1P21817 5038 aa4.16□□□□□ -1.74
CLTCL1-206ENST00000540896 ETDCA0A1B0GVM5 59 aa4.16□□□□□ -1.74
CLTCL1-206ENST00000540896 H0YGX0 51 aa4.16□□□□□ -1.74
CLTCL1-206ENST00000540896 PRYO14603 147 aa4.16□□□□□ -1.74
CLTCL1-206ENST00000540896 COX7BP24311 80 aa4.16□□□□□ -1.74
CLTCL1-206ENST00000540896 REG3GQ6UW15 175 aa4.16□□□□□ -1.74
CLTCL1-206ENST00000540896 CIRBP-AS1Q8TBR5 109 aa4.16□□□□□ -1.74
CLTCL1-206ENST00000540896 DYNC1H1Q14204 4646 aaKnown RBP4.15□□□□□ -1.74
CLTCL1-206ENST00000540896 A0A1B0GV90 55 aa4.15□□□□□ -1.75
CLTCL1-206ENST00000540896 PCP4P48539 62 aa4.15□□□□□ -1.75
CLTCL1-206ENST00000540896 HAMPP81172 84 aa4.15□□□□□ -1.75
CLTCL1-206ENST00000540896 SCXQ7RTU7 201 aa4.15□□□□□ -1.75
CLTCL1-206ENST00000540896 FAM19A1Q7Z5A9 133 aa4.15□□□□□ -1.75
CLTCL1-206ENST00000540896 SPCS1Q9Y6A9 102 aa4.15□□□□□ -1.75
CLTCL1-206ENST00000540896 HERC2O95714 4834 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 TRBV20-1A0A075B6N2 111 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 TRBV7-6A0A0J9YX20 115 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 EPM2AB3EWF7 344 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 SLC25A20O43772 301 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 ATXN8Q156A1 80 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 Q6ZSA8 131 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 GTF2H5Q6ZYL4 71 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 CLEC2BQ92478 149 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 LRP1BQ9NZR2 4599 aa4.14□□□□□ -1.75
CLTCL1-206ENST00000540896 TCL1BO95988 128 aa4.13□□□□□ -1.75
CLTCL1-206ENST00000540896 UBE2AP49459 152 aa4.13□□□□□ -1.75
CLTCL1-206ENST00000540896 KRTAP11-1Q8IUC1 163 aa4.13□□□□□ -1.75
CLTCL1-206ENST00000540896 DNAH8Q96JB1 4490 aa4.12□□□□□ -1.75
CLTCL1-206ENST00000540896 K7EP34 96 aa4.12□□□□□ -1.75
CLTCL1-206ENST00000540896 BCE1O60756 84 aa4.12□□□□□ -1.75
CLTCL1-206ENST00000540896 CDK2AP2O75956 126 aa4.12□□□□□ -1.75
CLTCL1-206ENST00000540896 DNAL4O96015 105 aa4.12□□□□□ -1.75
CLTCL1-206ENST00000540896 C1orf137Q5JT78 98 aa4.12□□□□□ -1.75
CLTCL1-206ENST00000540896 PSORS1C2Q9UIG4 136 aa4.12□□□□□ -1.75
CLTCL1-206ENST00000540896 KIAA1109Q2LD37 5005 aa4.12□□□□□ -1.75
CLTCL1-206ENST00000540896 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
CLTCL1-206ENST00000540896 hADV29S1A0JD25 119 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 H3BMG7 143 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 LST1O00453 97 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 INAFM2P0DMQ5 153 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 SPRR1AP35321 89 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 XGP55808 180 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 ELOF1P60002 83 aaKnown RBP4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 PRLHP81277 87 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 LINC00575Q6W349 94 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 Q6ZRX8 168 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 FAM218AQ96MZ4 157 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms