RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 LINC00469Q8N7U9 141 aa2.36□□□□□ -2.03
SOX9-AS1-214ENST00000540802 IFI27L1Q96BM0 104 aa2.36□□□□□ -2.03
SOX9-AS1-214ENST00000540802 ZNF625Q96I27 306 aaPredicted RBP2.36□□□□□ -2.03
SOX9-AS1-214ENST00000540802 GEMIN7Q9H840 131 aaKnown RBP2.36□□□□□ -2.03
SOX9-AS1-214ENST00000540802 IGKV2-24A0A0C4DH68 120 aa2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 TMEM223A0PJW6 202 aa2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 H3BRM9 83 aa2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 HSBP1O75506 76 aa2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 INAFM2P0DMQ5 153 aa2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 RPL37AP61513 92 aaKnown RBP2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 C9orf116Q5BN46 136 aaPredicted RBP2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 BAGE3Q86Y29 109 aa2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 FAM19A2Q8N3H0 131 aa2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 COX7B2Q8TF08 81 aa2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 TP73-AS1Q9UF72 201 aa2.35□□□□□ -2.03
SOX9-AS1-214ENST00000540802 LEPROTL1O95214 131 aa2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 OXTP01178 125 aa2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 SPINK8P0C7L1 97 aa2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 S100A1P23297 94 aa2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 RPL13AP40429 203 aaKnown RBP2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 RPL18AQ02543 176 aaKnown RBP2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 COX17Q14061 63 aa2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 C6orf226Q5I0X4 101 aa2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 SFTA2Q6UW10 78 aa2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 CHTOPQ9Y3Y2 248 aaKnown RBP2.34□□□□□ -2.03
SOX9-AS1-214ENST00000540802 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 LOC107984156A0A0G2JMH3 177 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 MT1HL1P0DM35 61 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 PLNP26678 52 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 TSPEAR-AS2P59090 65 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 CKS1BP61024 79 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 LINC01545Q5VT33 79 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 PHF5AQ7RTV0 110 aaKnown RBP2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 ARL17AQ8IVW1 177 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 TOMM7Q9P0U1 55 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 PSORS1C2Q9UIG4 136 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 HSPB8Q9UJY1 196 aa2.33□□□□□ -2.04
SOX9-AS1-214ENST00000540802 KRTAP4-16G5E9R7 235 aaPredicted RBP2.32□□□□□ -2.04
SOX9-AS1-214ENST00000540802 SYS1-DBNDD2H3BUS1 97 aa2.32□□□□□ -2.04
SOX9-AS1-214ENST00000540802 M0QXV9 152 aa2.32□□□□□ -2.04
SOX9-AS1-214ENST00000540802 NDUFA6P56556 154 aa2.32□□□□□ -2.04
SOX9-AS1-214ENST00000540802 TMEM170BQ5T4T1 132 aa2.32□□□□□ -2.04
SOX9-AS1-214ENST00000540802 SPINK6Q6UWN8 80 aa2.32□□□□□ -2.04
SOX9-AS1-214ENST00000540802 KRTAP13-1Q8IUC0 172 aa2.32□□□□□ -2.04
SOX9-AS1-214ENST00000540802 Q8NDZ9 215 aa2.32□□□□□ -2.04
SOX9-AS1-214ENST00000540802 ERG28Q9UKR5 140 aa2.32□□□□□ -2.04
SOX9-AS1-214ENST00000540802 IGKV2-28A0A075B6P5 120 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 LEPROTO15243 131 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 DPM2O94777 84 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 IGKV2D-28P01615 120 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 IGKCP01834 107 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 NMUP48645 174 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 FAM19A5Q7Z5A7 132 aaPredicted RBP2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 MRPL55Q7Z7F7 128 aaKnown RBP2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 CAMK2N1Q7Z7J9 78 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 LINC01600Q96MT4 127 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 MAP1LC3CQ9BXW4 147 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 SND1-IT1Q9HBX3 110 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 XAGE1AQ9HD64 81 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 C22orf24Q9Y442 160 aa2.31□□□□□ -2.04
SOX9-AS1-214ENST00000540802 IGLV1-50A0A075B6I6 118 aa2.3□□□□□ -2.04
SOX9-AS1-214ENST00000540802 J3QQQ9 107 aa2.3□□□□□ -2.04
SOX9-AS1-214ENST00000540802 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
SOX9-AS1-214ENST00000540802 C3orf79P0CE67 100 aa2.3□□□□□ -2.04
SOX9-AS1-214ENST00000540802 FABP4P15090 132 aa2.3□□□□□ -2.04
SOX9-AS1-214ENST00000540802 HIST3H2BBQ8N257 126 aa2.3□□□□□ -2.04
SOX9-AS1-214ENST00000540802 PLEKHB2Q96CS7 222 aa2.3□□□□□ -2.04
SOX9-AS1-214ENST00000540802 DPH3Q96FX2 82 aa2.3□□□□□ -2.04
SOX9-AS1-214ENST00000540802 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
SOX9-AS1-214ENST00000540802 IGKV2D-26A0A0A0MRZ7 120 aa2.29□□□□□ -2.04
SOX9-AS1-214ENST00000540802 MYMXA0A1B0GTQ4 84 aa2.29□□□□□ -2.04
SOX9-AS1-214ENST00000540802 LINC00587B1AMM8 73 aa2.29□□□□□ -2.04
SOX9-AS1-214ENST00000540802 SPRR1AP35321 89 aa2.29□□□□□ -2.04
SOX9-AS1-214ENST00000540802 C1orf137Q5JT78 98 aa2.29□□□□□ -2.04
SOX9-AS1-214ENST00000540802 HIST1H2BLQ99880 126 aa2.29□□□□□ -2.04
SOX9-AS1-214ENST00000540802 PMCHL2Q9BQD1 86 aa2.29□□□□□ -2.04
SOX9-AS1-214ENST00000540802 LPAP08519 4548 aa2.29□□□□□ -2.04
SOX9-AS1-214ENST00000540802 TRBV10-2A0A0K0K1G8 114 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 H0Y8G0 127 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 M0R378 163 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 BCE1O60756 84 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 TIMM17BO60830 172 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 NDUFC2O95298 119 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 SMIM13P0DJ93 91 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 PFN2P35080 140 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 SOSTDC1Q6X4U4 206 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 MIR7-3HGQ8N6C7 128 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 DIRC1Q969H9 104 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 KCNQ1DNQ9H478 68 aa2.28□□□□□ -2.04
SOX9-AS1-214ENST00000540802 RNF213Q63HN8 5207 aa2.27□□□□□ -2.05
SOX9-AS1-214ENST00000540802 PCP4L1A6NKN8 68 aa2.27□□□□□ -2.05
SOX9-AS1-214ENST00000540802 IGLV6-57P01721 117 aa2.27□□□□□ -2.05
SOX9-AS1-214ENST00000540802 LGALS3P17931 250 aaKnown RBP2.27□□□□□ -2.05
SOX9-AS1-214ENST00000540802 AKR1D1P51857 326 aa2.27□□□□□ -2.05
SOX9-AS1-214ENST00000540802 LINC00158P58513 81 aa2.27□□□□□ -2.05
SOX9-AS1-214ENST00000540802 UBE2BP63146 152 aa2.27□□□□□ -2.05
SOX9-AS1-214ENST00000540802 MEIG1Q5JSS6 88 aa2.27□□□□□ -2.05
SOX9-AS1-214ENST00000540802 TMEM126AQ9H061 195 aa2.27□□□□□ -2.05
SOX9-AS1-214ENST00000540802 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms