RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	LINC00476	Q8WZB0	136 aa		3.8	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	XAGE1A	Q9HD64	81 aa		3.8	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	PKD1L1	Q8TDX9	2849 aa		3.8	□□□□□ -1.8
RAPGEF4-215	ENST00000540783		A0A1B0GUV1	79 aa		3.79	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	NDUFC2-KCTD14	E9PQ53	114 aa		3.79	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	CAMK2N2	Q96S95	79 aa		3.79	□□□□□ -1.8
RAPGEF4-215	ENST00000540783		F8WDY8	70 aa		3.79	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	LINC00588	Q9Y4M8	146 aa		3.79	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	SERP1	Q9Y6X1	66 aa		3.79	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	TRBV10-3	A0A0K0K1G6	114 aa		3.78	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	LCE6A	A0A183	80 aa		3.78	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	CMYA5	Q8N3K9	4069 aa		3.78	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	DNAH10OS	P0CZ25	163 aa		3.78	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	CD164L2	Q6UWJ8	174 aa		3.78	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.78	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	TG	P01266	2768 aa		3.78	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	SPAG11B	Q08648	103 aa		3.78	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	FP248	Q71RG6	208 aa	Predicted RBP	3.78	□□□□□ -1.8
RAPGEF4-215	ENST00000540783	WFDC10B	Q8IUB3	73 aa		3.78	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	LOC110117498	A0A087WWA1	95 aa		3.77	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	MPLKIP	Q8TAP9	179 aa		3.77	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	TRBV7-6	A0A0J9YX20	115 aa		3.76	□□□□□ -1.81
RAPGEF4-215	ENST00000540783		J3QL48	77 aa		3.76	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	KLKP1	Q107X0	134 aa		3.76	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	COX17	Q14061	63 aa		3.76	□□□□□ -1.81
RAPGEF4-215	ENST00000540783		A0A0U1RQV1	116 aa		3.76	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	IGLV5-52	A0A0A0MRZ9	124 aa		3.76	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	ANK2	Q01484	3957 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	SMIM26	A0A096LP01	95 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	BPY2	O14599	106 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	IGLV6-57	P01721	117 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	SYCN	Q0VAF6	134 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	NREP	Q16612	68 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	BRK1	Q8WUW1	75 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	PRO0628	Q9UI54	55 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	EPM2A	B3EWF7	344 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	FAM229B	Q4G0N7	80 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	HIGD2B	Q4VC39	106 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	NKAPP1	Q8N9T2	125 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	C7orf33	Q8WU49	177 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	VWF	P04275	2813 aa		3.75	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	DIRC1	Q969H9	104 aa		3.74	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	ZNF73	O43830	326 aa	Predicted RBP	3.74	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	COX7B	P24311	80 aa		3.74	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	CXCL6	P80162	114 aa		3.74	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	DEFB105A	Q8NG35	78 aa		3.74	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	TMEM254	Q8TBM7	123 aa		3.74	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	TRBV7-4	A0A0J9YYF1	115 aa		3.73	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	LRCOL1	A6NCL2	159 aa		3.73	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	C6orf48	Q9UBA6	75 aa		3.73	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	3.73	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	UBE2B	P63146	152 aa		3.73	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	C16orf90	A8MZG2	172 aa		3.72	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	BCE1	O60756	84 aa		3.72	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	PDE6G	P18545	87 aa		3.72	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	HIGD2A	Q9BW72	106 aa		3.72	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	FBN1	P35555	2871 aa	Known RBP	3.72	□□□□□ -1.81
RAPGEF4-215	ENST00000540783	FAM30A	Q9NZY2	134 aa		3.71	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	LINC00528	Q8N1L1	170 aa		3.7	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	DNHD1	Q96M86	4753 aa		3.7	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	IGKV4-1	P06312	121 aa		3.7	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	ELOF1	P60002	83 aa	Known RBP	3.7	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	FUS	P35637	526 aa	Known RBP eCLIP	3.7	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	PRY	O14603	147 aa		3.7	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	NDUFC1	O43677	76 aa		3.7	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	STAB2	Q8WWQ8	2551 aa		3.69	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	IGKV2-24	A0A0C4DH68	120 aa		3.69	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	VPREB1	P12018	145 aa		3.69	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	PRR4	Q16378	134 aa		3.69	□□□□□ -1.82
RAPGEF4-215	ENST00000540783		Q6ZRU5	148 aa		3.69	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	OCR1	Q9BZK8	76 aa		3.69	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	PRR34	Q9NV39	138 aa		3.68	□□□□□ -1.82
RAPGEF4-215	ENST00000540783		A0A087WTM6	91 aa		3.68	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	SMIM29	Q86T20	159 aa		3.68	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	FAM229A	H3BQW9	127 aa		3.68	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	RTL8C	O15255	209 aa		3.68	□□□□□ -1.82
RAPGEF4-215	ENST00000540783		M0R378	163 aa		3.67	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	TRRAP	Q9Y4A5	3859 aa		3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	RPL37AP8	A6NKH3	93 aa		3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783		H3BQ85	93 aa		3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	C1orf195	Q5TG92	126 aa		3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783		Q6ZRP5	223 aa		3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783		A0A0G2JQZ4	141 aa		3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783		A0A1W2PNN7	141 aa		3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	TENM1	Q9UKZ4	2725 aa		3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	ATP5E	P56381	51 aa	Predicted RBP	3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783		Q8N377	158 aa		3.66	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	DNAH3	Q8TD57	4116 aa		3.65	□□□□□ -1.82
RAPGEF4-215	ENST00000540783	ETDC	A0A1B0GVM5	59 aa		3.65	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	PLA2G1B	P04054	148 aa	Known RBP	3.65	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	UBE2A	P49459	152 aa		3.65	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	ST20-AS1	Q8NBB2	130 aa		3.65	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	PSPHP1	O15172	72 aa		3.65	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	SERTAD4-AS1	Q5TG53	156 aa		3.65	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	ERC2-IT1	O76042	136 aa		3.64	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	DEFB116	Q30KQ4	102 aa		3.64	□□□□□ -1.83
RAPGEF4-215	ENST00000540783		Q6ZR54	194 aa		3.64	□□□□□ -1.83
RAPGEF4-215	ENST00000540783		A0A1W2PNM2	257 aa		3.64	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	C15orf56	Q8N910	161 aa		3.64	□□□□□ -1.83

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