RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 M0QY20 66 aa8.6□□□□□ -1.03
DDX55-206ENST00000539934 IGHV3-30-3P0DP02 117 aa8.6□□□□□ -1.03
DDX55-206ENST00000539934 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
DDX55-206ENST00000539934 CASC10Q5T4H9 136 aa8.6□□□□□ -1.03
DDX55-206ENST00000539934 C9orf66Q5T8R8 295 aa8.6□□□□□ -1.03
DDX55-206ENST00000539934 A0A087X002 238 aa8.59□□□□□ -1.03
DDX55-206ENST00000539934 TRBV6-5A0A0K0K1A5 114 aa8.59□□□□□ -1.03
DDX55-206ENST00000539934 FRAS1Q86XX4 4008 aa8.59□□□□□ -1.03
DDX55-206ENST00000539934 MOBPQ13875 183 aa8.58□□□□□ -1.04
DDX55-206ENST00000539934 Q8N3U1 123 aa8.58□□□□□ -1.04
DDX55-206ENST00000539934 DEFB104AQ8WTQ1 72 aa8.58□□□□□ -1.04
DDX55-206ENST00000539934 LRCOL1A6NCL2 159 aa8.57□□□□□ -1.04
DDX55-206ENST00000539934 LINC01547P58512 204 aaPredicted RBP8.57□□□□□ -1.04
DDX55-206ENST00000539934 GIG44P09565 113 aaPredicted RBP8.57□□□□□ -1.04
DDX55-206ENST00000539934 EGFEM1PQ0D2K5 195 aa8.57□□□□□ -1.04
DDX55-206ENST00000539934 CDC42SE2Q9NRR3 84 aa8.57□□□□□ -1.04
DDX55-206ENST00000539934 H0YGX0 51 aa8.56□□□□□ -1.04
DDX55-206ENST00000539934 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
DDX55-206ENST00000539934 TRGV1A0A0A0MS02 117 aa8.56□□□□□ -1.04
DDX55-206ENST00000539934 NCR3O14931 201 aa8.56□□□□□ -1.04
DDX55-206ENST00000539934 FAM30AQ9NZY2 134 aa8.56□□□□□ -1.04
DDX55-206ENST00000539934 MIR7-3HGQ8N6C7 128 aa8.55□□□□□ -1.04
DDX55-206ENST00000539934 MUC7Q8TAX7 377 aa8.54□□□□□ -1.04
DDX55-206ENST00000539934 C16orf74Q96GX8 76 aa8.54□□□□□ -1.04
DDX55-206ENST00000539934 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
DDX55-206ENST00000539934 LOC101927531A0A1B0GV80 90 aa8.53□□□□□ -1.04
DDX55-206ENST00000539934 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
DDX55-206ENST00000539934 GYPEP15421 78 aa8.53□□□□□ -1.04
DDX55-206ENST00000539934 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
DDX55-206ENST00000539934 CSNK1G2-AS1Q8NCQ2 148 aa8.53□□□□□ -1.04
DDX55-206ENST00000539934 LINC00308Q8TCZ7 52 aa8.53□□□□□ -1.04
DDX55-206ENST00000539934 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
DDX55-206ENST00000539934 Q6ZTI0 123 aa8.53□□□□□ -1.04
DDX55-206ENST00000539934 NOP10Q9NPE3 64 aaKnown RBP8.53□□□□□ -1.04
DDX55-206ENST00000539934 A6NED7 52 aa8.52□□□□□ -1.05
DDX55-206ENST00000539934 BPY2O14599 106 aa8.52□□□□□ -1.05
DDX55-206ENST00000539934 IGHV3-53P01767 116 aa8.52□□□□□ -1.05
DDX55-206ENST00000539934 Q6ZSN1 163 aa8.52□□□□□ -1.05
DDX55-206ENST00000539934 OCR1Q9BZK8 76 aa8.52□□□□□ -1.05
DDX55-206ENST00000539934 LCE6AA0A183 80 aa8.5□□□□□ -1.05
DDX55-206ENST00000539934 Q8N9P0 234 aaPredicted RBP8.5□□□□□ -1.05
DDX55-206ENST00000539934 PCLOQ9Y6V0 5065 aa8.5□□□□□ -1.05
DDX55-206ENST00000539934 IGHV3-64A0A075B6Q5 118 aa8.5□□□□□ -1.05
DDX55-206ENST00000539934 TRGV2A0A075B6R0 118 aa8.49□□□□□ -1.05
DDX55-206ENST00000539934 C20orf203Q8NBC4 194 aa8.49□□□□□ -1.05
DDX55-206ENST00000539934 A0A087WYN8 130 aa8.48□□□□□ -1.05
DDX55-206ENST00000539934 NDUFA1O15239 70 aa8.48□□□□□ -1.05
DDX55-206ENST00000539934 PRR15LQ9BU68 103 aa8.48□□□□□ -1.05
DDX55-206ENST00000539934 RYR1P21817 5038 aa8.47□□□□□ -1.05
DDX55-206ENST00000539934 IGHV3-38A0A0C4DH36 116 aa8.47□□□□□ -1.05
DDX55-206ENST00000539934 K7EQD1 137 aa8.47□□□□□ -1.05
DDX55-206ENST00000539934 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
DDX55-206ENST00000539934 RETNLBQ9BQ08 111 aa8.46□□□□□ -1.05
DDX55-206ENST00000539934 RPL36AP83881 106 aaKnown RBP8.46□□□□□ -1.06
DDX55-206ENST00000539934 RPL36ALQ969Q0 106 aaKnown RBP8.46□□□□□ -1.06
DDX55-206ENST00000539934 PRAC1Q96KF2 57 aa8.46□□□□□ -1.06
DDX55-206ENST00000539934 HIGD2AQ9BW72 106 aa8.46□□□□□ -1.06
DDX55-206ENST00000539934 TRBV10-1A0A0K0K1A3 114 aa8.45□□□□□ -1.06
DDX55-206ENST00000539934 IGKV2-29A2NJV5 120 aaPredicted RBP8.45□□□□□ -1.06
DDX55-206ENST00000539934 CASC2Q6XLA1 102 aa8.45□□□□□ -1.06
DDX55-206ENST00000539934 PLECQ15149 4684 aaKnown RBP8.45□□□□□ -1.06
DDX55-206ENST00000539934 TRGV4A0A0C4DH28 118 aa8.44□□□□□ -1.06
DDX55-206ENST00000539934 ELOF1P60002 83 aaKnown RBP8.44□□□□□ -1.06
DDX55-206ENST00000539934 RNASE13Q5GAN3 156 aaKnown RBP8.44□□□□□ -1.06
DDX55-206ENST00000539934 DEFB135Q30KP9 77 aa8.44□□□□□ -1.06
DDX55-206ENST00000539934 CHCHD10Q8WYQ3 142 aaPredicted RBP8.44□□□□□ -1.06
DDX55-206ENST00000539934 LOC110117498A0A087WWA1 95 aa8.43□□□□□ -1.06
DDX55-206ENST00000539934 NANOS2P60321 138 aaKnown RBP8.43□□□□□ -1.06
DDX55-206ENST00000539934 HAMPP81172 84 aa8.43□□□□□ -1.06
DDX55-206ENST00000539934 CHCHD7Q9BUK0 85 aa8.43□□□□□ -1.06
DDX55-206ENST00000539934 IGLV4-3A0A075B6K6 122 aa8.42□□□□□ -1.06
DDX55-206ENST00000539934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.42□□□□□ -1.06
DDX55-206ENST00000539934 DEFB130BP0DP73 79 aa8.42□□□□□ -1.06
DDX55-206ENST00000539934 DEFB130AP0DP74 79 aa8.42□□□□□ -1.06
DDX55-206ENST00000539934 ZCCHC13Q8WW36 166 aaKnown RBP8.42□□□□□ -1.06
DDX55-206ENST00000539934 TRBV6-4A0A1B0GX49 114 aa8.41□□□□□ -1.06
DDX55-206ENST00000539934 LECT2O14960 151 aa8.41□□□□□ -1.06
DDX55-206ENST00000539934 CRPP02741 224 aa8.41□□□□□ -1.06
DDX55-206ENST00000539934 IGHV4-30-4P0DP06 118 aa8.4□□□□□ -1.06
DDX55-206ENST00000539934 KMT2AQ03164 3969 aa8.4□□□□□ -1.07
DDX55-206ENST00000539934 Q6ZQT0 140 aa8.39□□□□□ -1.07
DDX55-206ENST00000539934 Q9BRP9 147 aa8.39□□□□□ -1.07
DDX55-206ENST00000539934 HERC2O95714 4834 aa8.39□□□□□ -1.07
DDX55-206ENST00000539934 CELA1Q9UNI1 258 aa8.39□□□□□ -1.07
DDX55-206ENST00000539934 LINC00612Q8N6U2 182 aa8.38□□□□□ -1.07
DDX55-206ENST00000539934 LINC00476Q8WZB0 136 aa8.38□□□□□ -1.07
DDX55-206ENST00000539934 Q8N814 137 aa8.38□□□□□ -1.07
DDX55-206ENST00000539934 DEFB4AO15263 64 aa8.37□□□□□ -1.07
DDX55-206ENST00000539934 PDE6GP18545 87 aa8.37□□□□□ -1.07
DDX55-206ENST00000539934 IGHV4-28A0A0C4DH34 117 aa8.37□□□□□ -1.07
DDX55-206ENST00000539934 NTM-AS1Q6ZSK4 140 aa8.37□□□□□ -1.07
DDX55-206ENST00000539934 FAM104AQ969W3 186 aa8.37□□□□□ -1.07
DDX55-206ENST00000539934 NDUFB1O75438 58 aa8.36□□□□□ -1.07
DDX55-206ENST00000539934 REG3AQ06141 175 aa8.35□□□□□ -1.07
DDX55-206ENST00000539934 SMIM11BQ8TCY0 68 aa8.35□□□□□ -1.07
DDX55-206ENST00000539934 KIAA1109Q2LD37 5005 aa8.34□□□□□ -1.07
DDX55-206ENST00000539934 Q8NAQ8 132 aa8.33□□□□□ -1.08
DDX55-206ENST00000539934 PRO0255Q9UI72 69 aa8.33□□□□□ -1.08
DDX55-206ENST00000539934 SPART-AS1P0CW21 52 aa8.31□□□□□ -1.08
DDX55-206ENST00000539934 A0A1B0GW54 56 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms