RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 IGLV1-50A0A075B6I6 118 aa6.64□□□□□ -1.35
COL4A6-208ENST00000538570 COL27A1Q8IZC6 1860 aaPredicted RBP6.64□□□□□ -1.35
COL4A6-208ENST00000538570 EPG5Q9HCE0 2579 aa6.63□□□□□ -1.35
COL4A6-208ENST00000538570 C9orf129Q5T035 196 aaKnown RBP6.63□□□□□ -1.35
COL4A6-208ENST00000538570 KCNQ1DNQ9H478 68 aa6.63□□□□□ -1.35
COL4A6-208ENST00000538570 J3QL48 77 aa6.62□□□□□ -1.35
COL4A6-208ENST00000538570 C8orf17Q9NRJ1 99 aa6.61□□□□□ -1.35
COL4A6-208ENST00000538570 IGFL1Q6UW32 110 aa6.61□□□□□ -1.35
COL4A6-208ENST00000538570 GOLGB1Q14789 3259 aaKnown RBP6.61□□□□□ -1.35
COL4A6-208ENST00000538570 DSCR10P59022 87 aa6.61□□□□□ -1.35
COL4A6-208ENST00000538570 FAM229BQ4G0N7 80 aa6.61□□□□□ -1.35
COL4A6-208ENST00000538570 COL4A2P08572 1712 aa6.6□□□□□ -1.35
COL4A6-208ENST00000538570 Q75L30 129 aa6.6□□□□□ -1.35
COL4A6-208ENST00000538570 KRTAP24-1Q3LI83 254 aa6.6□□□□□ -1.35
COL4A6-208ENST00000538570 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
COL4A6-208ENST00000538570 ACANP16112 2415 aa6.6□□□□□ -1.35
COL4A6-208ENST00000538570 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
COL4A6-208ENST00000538570 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
COL4A6-208ENST00000538570 FP248Q71RG6 208 aaPredicted RBP6.58□□□□□ -1.36
COL4A6-208ENST00000538570 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
COL4A6-208ENST00000538570 KLK9Q2XQG4 91 aa6.58□□□□□ -1.36
COL4A6-208ENST00000538570 KRTAP16-1A8MUX0 517 aa6.57□□□□□ -1.36
COL4A6-208ENST00000538570 SPANXA2-OT1Q8N9U9 137 aa6.57□□□□□ -1.36
COL4A6-208ENST00000538570 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
COL4A6-208ENST00000538570 ANKRD17O75179 2603 aaKnown RBP6.56□□□□□ -1.36
COL4A6-208ENST00000538570 LINC00304Q8N9R0 145 aa6.55□□□□□ -1.36
COL4A6-208ENST00000538570 OBSCN-AS1Q96MR7 158 aa6.55□□□□□ -1.36
COL4A6-208ENST00000538570 Q8N377 158 aa6.54□□□□□ -1.36
COL4A6-208ENST00000538570 WWC2-AS2Q96NR7 200 aa6.54□□□□□ -1.36
COL4A6-208ENST00000538570 ZNF861PO60384 105 aa6.53□□□□□ -1.36
COL4A6-208ENST00000538570 CSNK1G2-AS1Q8NCQ2 148 aa6.53□□□□□ -1.36
COL4A6-208ENST00000538570 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
COL4A6-208ENST00000538570 PLA2G2DQ9UNK4 145 aa6.52□□□□□ -1.36
COL4A6-208ENST00000538570 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
COL4A6-208ENST00000538570 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
COL4A6-208ENST00000538570 PRR34Q9NV39 138 aa6.51□□□□□ -1.37
COL4A6-208ENST00000538570 FLNBO75369 2602 aaKnown RBP6.5□□□□□ -1.37
COL4A6-208ENST00000538570 CYSTM1Q9H1C7 97 aa6.49□□□□□ -1.37
COL4A6-208ENST00000538570 TLX1NBP0CAT3 122 aa6.49□□□□□ -1.37
COL4A6-208ENST00000538570 A0A0D9SG42 100 aa6.48□□□□□ -1.37
COL4A6-208ENST00000538570 A0A0G2JQZ4 141 aa6.48□□□□□ -1.37
COL4A6-208ENST00000538570 A0A1W2PNN7 141 aa6.48□□□□□ -1.37
COL4A6-208ENST00000538570 Q5VV11 94 aa6.48□□□□□ -1.37
COL4A6-208ENST00000538570 C9orf163Q8N9P6 203 aa6.48□□□□□ -1.37
COL4A6-208ENST00000538570 F8P00451 2351 aa6.47□□□□□ -1.37
COL4A6-208ENST00000538570 IGLV5-37A0A075B6J1 123 aa6.47□□□□□ -1.37
COL4A6-208ENST00000538570 FAM104AQ969W3 186 aa6.46□□□□□ -1.37
COL4A6-208ENST00000538570 OXTP01178 125 aa6.46□□□□□ -1.38
COL4A6-208ENST00000538570 KRTAP10-11P60412 298 aa6.45□□□□□ -1.38
COL4A6-208ENST00000538570 A0A087WTM6 91 aa6.44□□□□□ -1.38
COL4A6-208ENST00000538570 OCR1Q9BZK8 76 aa6.44□□□□□ -1.38
COL4A6-208ENST00000538570 PRRC2CQ9Y520 2896 aaKnown RBP6.44□□□□□ -1.38
COL4A6-208ENST00000538570 C19orf73Q9NVV2 129 aa6.44□□□□□ -1.38
COL4A6-208ENST00000538570 PCSK5Q92824 1860 aa6.44□□□□□ -1.38
COL4A6-208ENST00000538570 IGLV7-43P04211 117 aa6.43□□□□□ -1.38
COL4A6-208ENST00000538570 ANAPC11Q9NYG5 84 aa6.43□□□□□ -1.38
COL4A6-208ENST00000538570 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
COL4A6-208ENST00000538570 K7EIL1 84 aa6.43□□□□□ -1.38
COL4A6-208ENST00000538570 SPRR4Q96PI1 79 aa6.42□□□□□ -1.38
COL4A6-208ENST00000538570 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
COL4A6-208ENST00000538570 LINC00612Q8N6U2 182 aa6.42□□□□□ -1.38
COL4A6-208ENST00000538570 A0A1W2PNM2 257 aa6.42□□□□□ -1.38
COL4A6-208ENST00000538570 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
COL4A6-208ENST00000538570 Q8N1X5 172 aa6.41□□□□□ -1.38
COL4A6-208ENST00000538570 HECTD1Q9ULT8 2610 aa6.4□□□□□ -1.38
COL4A6-208ENST00000538570 GIG44P09565 113 aaPredicted RBP6.4□□□□□ -1.38
COL4A6-208ENST00000538570 PRR26Q8N8Z3 221 aa6.4□□□□□ -1.38
COL4A6-208ENST00000538570 PSORS1C2Q9UIG4 136 aa6.4□□□□□ -1.38
COL4A6-208ENST00000538570 SMR3BP02814 79 aaPredicted RBP6.39□□□□□ -1.39
COL4A6-208ENST00000538570 SPINK7P58062 85 aa6.39□□□□□ -1.39
COL4A6-208ENST00000538570 DNAH12Q6ZR08 3092 aa6.37□□□□□ -1.39
COL4A6-208ENST00000538570 CNBPP62633 177 aaKnown RBP6.37□□□□□ -1.39
COL4A6-208ENST00000538570 A0A096LNT2 108 aa6.37□□□□□ -1.39
COL4A6-208ENST00000538570 IGLV7-46A0A075B6I9 117 aa6.35□□□□□ -1.39
COL4A6-208ENST00000538570 LINC00483Q53H64 154 aa6.35□□□□□ -1.39
COL4A6-208ENST00000538570 KRTAP10-3P60369 221 aa6.34□□□□□ -1.39
COL4A6-208ENST00000538570 CASC10Q5T4H9 136 aa6.34□□□□□ -1.39
COL4A6-208ENST00000538570 ZNF575Q86XF7 245 aa6.34□□□□□ -1.4
COL4A6-208ENST00000538570 MGAM2Q2M2H8 2515 aa6.32□□□□□ -1.4
COL4A6-208ENST00000538570 CEP350Q5VT06 3117 aa6.32□□□□□ -1.4
COL4A6-208ENST00000538570 A0A1B0GU33 70 aa6.32□□□□□ -1.4
COL4A6-208ENST00000538570 USP24Q9UPU5 2620 aa6.31□□□□□ -1.4
COL4A6-208ENST00000538570 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
COL4A6-208ENST00000538570 ASB16-AS1Q495Z4 193 aa6.29□□□□□ -1.4
COL4A6-208ENST00000538570 SEC61BP60468 96 aaKnown RBP6.26□□□□□ -1.41
COL4A6-208ENST00000538570 Q6ZSA8 131 aa6.26□□□□□ -1.41
COL4A6-208ENST00000538570 HRES1P13985 223 aa6.25□□□□□ -1.41
COL4A6-208ENST00000538570 UTRNP46939 3433 aa6.25□□□□□ -1.41
COL4A6-208ENST00000538570 A6NN06 94 aa6.23□□□□□ -1.41
COL4A6-208ENST00000538570 KRTAP1-3Q8IUG1 177 aa6.22□□□□□ -1.41
COL4A6-208ENST00000538570 CHD7Q9P2D1 2997 aa6.22□□□□□ -1.41
COL4A6-208ENST00000538570 ROMO1P60602 79 aa6.22□□□□□ -1.41
COL4A6-208ENST00000538570 FLNAP21333 2647 aaKnown RBP6.22□□□□□ -1.41
COL4A6-208ENST00000538570 HELZ2Q9BYK8 2649 aaKnown RBP6.21□□□□□ -1.42
COL4A6-208ENST00000538570 NDUFAF8A1L188 74 aa6.21□□□□□ -1.42
COL4A6-208ENST00000538570 MAST4O15021 2626 aa6.21□□□□□ -1.42
COL4A6-208ENST00000538570 ATRQ13535 2644 aa6.2□□□□□ -1.42
COL4A6-208ENST00000538570 KRTAP1-1Q07627 177 aa6.19□□□□□ -1.42
COL4A6-208ENST00000538570 ITPR3Q14573 2671 aa6.18□□□□□ -1.42
COL4A6-208ENST00000538570 TNP2Q05952 138 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms