RNA–Protein interactions for RNA: ENST00000536702.1

CUL3-213, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-213ENST00000536702 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
CUL3-213ENST00000536702 HBDP02042 147 aa8.64□□□□□ -1.03
CUL3-213ENST00000536702 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
CUL3-213ENST00000536702 BAGE3Q86Y29 109 aa8.64□□□□□ -1.03
CUL3-213ENST00000536702 NCR3O14931 201 aa8.63□□□□□ -1.03
CUL3-213ENST00000536702 SNHG12Q9BXW3 62 aa8.63□□□□□ -1.03
CUL3-213ENST00000536702 PRYO14603 147 aa8.62□□□□□ -1.03
CUL3-213ENST00000536702 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
CUL3-213ENST00000536702 C18orf32Q8TCD1 76 aa8.62□□□□□ -1.03
CUL3-213ENST00000536702 KRTAP4-1Q9BYQ7 146 aa8.62□□□□□ -1.03
CUL3-213ENST00000536702 PCP4P48539 62 aa8.61□□□□□ -1.03
CUL3-213ENST00000536702 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
CUL3-213ENST00000536702 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
CUL3-213ENST00000536702 SMCR5Q8TEV8 140 aa8.6□□□□□ -1.03
CUL3-213ENST00000536702 ETDCA0A1B0GVM5 59 aa8.59□□□□□ -1.03
CUL3-213ENST00000536702 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
CUL3-213ENST00000536702 CHTOPQ9Y3Y2 248 aaKnown RBP8.59□□□□□ -1.03
CUL3-213ENST00000536702 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
CUL3-213ENST00000536702 SPRR1AP35321 89 aa8.58□□□□□ -1.04
CUL3-213ENST00000536702 SPINK1P00995 79 aa8.57□□□□□ -1.04
CUL3-213ENST00000536702 MEIG1Q5JSS6 88 aa8.57□□□□□ -1.04
CUL3-213ENST00000536702 KCNQ1DNQ9H478 68 aa8.57□□□□□ -1.04
CUL3-213ENST00000536702 TRAPPC1Q9Y5R8 145 aa8.57□□□□□ -1.04
CUL3-213ENST00000536702 KRTAP4-16G5E9R7 235 aaPredicted RBP8.56□□□□□ -1.04
CUL3-213ENST00000536702 MOBPQ13875 183 aa8.56□□□□□ -1.04
CUL3-213ENST00000536702 LINC00483Q53H64 154 aa8.56□□□□□ -1.04
CUL3-213ENST00000536702 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
CUL3-213ENST00000536702 IGLV9-49A0A0B4J1Y8 123 aa8.55□□□□□ -1.04
CUL3-213ENST00000536702 TRBV10-3A0A0K0K1G6 114 aa8.55□□□□□ -1.04
CUL3-213ENST00000536702 SEC61BP60468 96 aaKnown RBP8.55□□□□□ -1.04
CUL3-213ENST00000536702 GAGE2AQ6NT46 116 aa8.55□□□□□ -1.04
CUL3-213ENST00000536702 KRTAP4-9Q9BYQ8 210 aa8.55□□□□□ -1.04
CUL3-213ENST00000536702 ERC2-IT1O76042 136 aa8.53□□□□□ -1.04
CUL3-213ENST00000536702 C21orf62-AS1Q17RA5 79 aa8.53□□□□□ -1.04
CUL3-213ENST00000536702 Q8N377 158 aa8.53□□□□□ -1.04
CUL3-213ENST00000536702 MIEN1Q9BRT3 115 aa8.53□□□□□ -1.04
CUL3-213ENST00000536702 NDUFA12Q9UI09 145 aa8.53□□□□□ -1.04
CUL3-213ENST00000536702 TRAV12-1A0A0B4J245 112 aa8.51□□□□□ -1.05
CUL3-213ENST00000536702 B5MCH6 92 aa8.51□□□□□ -1.05
CUL3-213ENST00000536702 COL5A1-AS1Q5SY13 56 aa8.51□□□□□ -1.05
CUL3-213ENST00000536702 FAM19A2Q8N3H0 131 aa8.51□□□□□ -1.05
CUL3-213ENST00000536702 IFI27L1Q96BM0 104 aa8.51□□□□□ -1.05
CUL3-213ENST00000536702 HERV-K104P63124 156 aa8.5□□□□□ -1.05
CUL3-213ENST00000536702 RPS29P62273 56 aaKnown RBP8.49□□□□□ -1.05
CUL3-213ENST00000536702 Q9BRP9 147 aa8.49□□□□□ -1.05
CUL3-213ENST00000536702 SLC25A20O43772 301 aa8.47□□□□□ -1.05
CUL3-213ENST00000536702 SCGB1D1O95968 90 aa8.47□□□□□ -1.05
CUL3-213ENST00000536702 TSPEAR-AS2P59090 65 aa8.47□□□□□ -1.05
CUL3-213ENST00000536702 SSBP3-AS1Q7Z2R9 100 aa8.47□□□□□ -1.05
CUL3-213ENST00000536702 MYMXA0A1B0GTQ4 84 aa8.46□□□□□ -1.06
CUL3-213ENST00000536702 MAP1LC3CQ9BXW4 147 aa8.46□□□□□ -1.06
CUL3-213ENST00000536702 C9orf153Q5TBE3 101 aa8.45□□□□□ -1.06
CUL3-213ENST00000536702 Q6ZRX8 168 aa8.45□□□□□ -1.06
CUL3-213ENST00000536702 CHCHD1Q96BP2 118 aaKnown RBP8.45□□□□□ -1.06
CUL3-213ENST00000536702 H0Y8G0 127 aa8.44□□□□□ -1.06
CUL3-213ENST00000536702 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
CUL3-213ENST00000536702 CRCT1Q9UGL9 99 aa8.43□□□□□ -1.06
CUL3-213ENST00000536702 FSIP2Q5CZC0 6907 aa8.43□□□□□ -1.06
CUL3-213ENST00000536702 C20orf202A1L168 122 aa8.42□□□□□ -1.06
CUL3-213ENST00000536702 VAMP8Q9BV40 100 aa8.42□□□□□ -1.06
CUL3-213ENST00000536702 SPANXB1Q9NS25 103 aaPredicted RBP8.42□□□□□ -1.06
CUL3-213ENST00000536702 LOC107984156A0A0G2JMH3 177 aa8.41□□□□□ -1.06
CUL3-213ENST00000536702 ARL17AQ8IVW1 177 aa8.41□□□□□ -1.06
CUL3-213ENST00000536702 LEPROTO15243 131 aa8.4□□□□□ -1.06
CUL3-213ENST00000536702 UBE2V1Q13404 147 aa8.4□□□□□ -1.06
CUL3-213ENST00000536702 ST20-AS1Q8NBB2 130 aa8.4□□□□□ -1.06
CUL3-213ENST00000536702 UQCR10Q9UDW1 63 aa8.4□□□□□ -1.06
CUL3-213ENST00000536702 TRAV23DV6A0A075B6W5 121 aa8.39□□□□□ -1.07
CUL3-213ENST00000536702 HSBP1O75506 76 aa8.39□□□□□ -1.07
CUL3-213ENST00000536702 IGLV6-57P01721 117 aa8.39□□□□□ -1.07
CUL3-213ENST00000536702 S100A7L2Q5SY68 101 aa8.39□□□□□ -1.07
CUL3-213ENST00000536702 KRTAP19-2Q3LHN2 52 aa8.38□□□□□ -1.07
CUL3-213ENST00000536702 J3QQQ9 107 aa8.37□□□□□ -1.07
CUL3-213ENST00000536702 NPC2P61916 151 aa8.37□□□□□ -1.07
CUL3-213ENST00000536702 KRTAP9-3Q9BYQ3 159 aa8.37□□□□□ -1.07
CUL3-213ENST00000536702 SVIPQ8NHG7 77 aa8.36□□□□□ -1.07
CUL3-213ENST00000536702 C9orf118A6NHY6 69 aa8.35□□□□□ -1.07
CUL3-213ENST00000536702 ZNF73O43830 326 aaPredicted RBP8.35□□□□□ -1.07
CUL3-213ENST00000536702 NDUFC2O95298 119 aa8.35□□□□□ -1.07
CUL3-213ENST00000536702 PLNP26678 52 aa8.35□□□□□ -1.07
CUL3-213ENST00000536702 MT1HP80294 61 aa8.35□□□□□ -1.07
CUL3-213ENST00000536702 PCOTHQ58A44 107 aa8.35□□□□□ -1.07
CUL3-213ENST00000536702 SOSTDC1Q6X4U4 206 aa8.35□□□□□ -1.07
CUL3-213ENST00000536702 LGALS3P17931 250 aaKnown RBP8.34□□□□□ -1.07
CUL3-213ENST00000536702 LCE5AQ5TCM9 118 aa8.34□□□□□ -1.07
CUL3-213ENST00000536702 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
CUL3-213ENST00000536702 PMCHL2Q9BQD1 86 aa8.34□□□□□ -1.07
CUL3-213ENST00000536702 PAM16Q9Y3D7 125 aa8.34□□□□□ -1.07
CUL3-213ENST00000536702 IGLV8-61A0A075B6I0 122 aa8.33□□□□□ -1.08
CUL3-213ENST00000536702 C9orf92A6NGG3 77 aa8.33□□□□□ -1.08
CUL3-213ENST00000536702 SERF1AO75920 110 aa8.33□□□□□ -1.08
CUL3-213ENST00000536702 LEPROTL1O95214 131 aa8.33□□□□□ -1.08
CUL3-213ENST00000536702 NMUP48645 174 aa8.33□□□□□ -1.08
CUL3-213ENST00000536702 HERVK_113P61574 105 aa8.33□□□□□ -1.08
CUL3-213ENST00000536702 BATFQ16520 125 aa8.33□□□□□ -1.08
CUL3-213ENST00000536702 DPM2O94777 84 aa8.32□□□□□ -1.08
CUL3-213ENST00000536702 SPATA45Q537H7 98 aa8.32□□□□□ -1.08
CUL3-213ENST00000536702 PET117Q6UWS5 81 aa8.32□□□□□ -1.08
CUL3-213ENST00000536702 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
CUL3-213ENST00000536702 HSBP1L1C9JCN9 74 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms