RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TRBV7-6A0A0J9YX20 115 aa8.67□□□□□ -1.02
LDLR-203ENST00000535915 SYCNQ0VAF6 134 aa8.67□□□□□ -1.02
LDLR-203ENST00000535915 FAM19A1Q7Z5A9 133 aa8.67□□□□□ -1.02
LDLR-203ENST00000535915 M0R2N4 97 aa8.66□□□□□ -1.02
LDLR-203ENST00000535915 SERP1Q9Y6X1 66 aa8.66□□□□□ -1.02
LDLR-203ENST00000535915 DNAH10OSP0CZ25 163 aa8.65□□□□□ -1.03
LDLR-203ENST00000535915 F8WDY8 70 aa8.64□□□□□ -1.03
LDLR-203ENST00000535915 PKIGQ9Y2B9 76 aa8.64□□□□□ -1.03
LDLR-203ENST00000535915 PDE6GP18545 87 aa8.63□□□□□ -1.03
LDLR-203ENST00000535915 LINC00528Q8N1L1 170 aa8.62□□□□□ -1.03
LDLR-203ENST00000535915 PRB2P02812 416 aaPredicted RBP8.62□□□□□ -1.03
LDLR-203ENST00000535915 TRAV10A0A0B4J240 114 aa8.61□□□□□ -1.03
LDLR-203ENST00000535915 H7BZZ5 65 aa8.61□□□□□ -1.03
LDLR-203ENST00000535915 NKAPP1Q8N9T2 125 aa8.61□□□□□ -1.03
LDLR-203ENST00000535915 NBEAL1Q6ZS30 2694 aa8.61□□□□□ -1.03
LDLR-203ENST00000535915 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
LDLR-203ENST00000535915 HAMPP81172 84 aa8.6□□□□□ -1.03
LDLR-203ENST00000535915 Q6ZVQ6 151 aa8.6□□□□□ -1.03
LDLR-203ENST00000535915 TRBV7-4A0A0J9YYF1 115 aa8.6□□□□□ -1.03
LDLR-203ENST00000535915 SERTAD4-AS1Q5TG53 156 aa8.6□□□□□ -1.03
LDLR-203ENST00000535915 COL6A5A8TX70 2615 aa8.59□□□□□ -1.03
LDLR-203ENST00000535915 EPM2AB3EWF7 344 aa8.59□□□□□ -1.03
LDLR-203ENST00000535915 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
LDLR-203ENST00000535915 SMIM26A0A096LP01 95 aa8.58□□□□□ -1.04
LDLR-203ENST00000535915 SNURFQ9Y675 71 aa8.58□□□□□ -1.04
LDLR-203ENST00000535915 TRAV7A0A075B6U4 112 aa8.57□□□□□ -1.04
LDLR-203ENST00000535915 C7orf33Q8WU49 177 aa8.57□□□□□ -1.04
LDLR-203ENST00000535915 DNAH1Q9P2D7 4330 aa8.57□□□□□ -1.04
LDLR-203ENST00000535915 CASC10Q5T4H9 136 aa8.57□□□□□ -1.04
LDLR-203ENST00000535915 KCNQ1DNQ9H478 68 aa8.57□□□□□ -1.04
LDLR-203ENST00000535915 HUWE1Q7Z6Z7 4374 aaKnown RBP8.57□□□□□ -1.04
LDLR-203ENST00000535915 TLX1NBP0CAT3 122 aa8.56□□□□□ -1.04
LDLR-203ENST00000535915 TM2D3Q9BRN9 247 aa8.56□□□□□ -1.04
LDLR-203ENST00000535915 FP248Q71RG6 208 aaPredicted RBP8.55□□□□□ -1.04
LDLR-203ENST00000535915 F8WEM9 126 aa8.55□□□□□ -1.04
LDLR-203ENST00000535915 RMI2Q96E14 147 aa8.55□□□□□ -1.04
LDLR-203ENST00000535915 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
LDLR-203ENST00000535915 FAM168BA1KXE4 195 aa8.54□□□□□ -1.04
LDLR-203ENST00000535915 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
LDLR-203ENST00000535915 DEFB105AQ8NG35 78 aa8.54□□□□□ -1.04
LDLR-203ENST00000535915 BRK1Q8WUW1 75 aa8.54□□□□□ -1.04
LDLR-203ENST00000535915 CXCL6P80162 114 aa8.53□□□□□ -1.04
LDLR-203ENST00000535915 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
LDLR-203ENST00000535915 K7EIL1 84 aa8.52□□□□□ -1.05
LDLR-203ENST00000535915 A0A0U1RQV1 116 aa8.52□□□□□ -1.05
LDLR-203ENST00000535915 BCE1O60756 84 aa8.52□□□□□ -1.05
LDLR-203ENST00000535915 SCXQ7RTU7 201 aa8.51□□□□□ -1.05
LDLR-203ENST00000535915 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
LDLR-203ENST00000535915 Q8N377 158 aa8.5□□□□□ -1.05
LDLR-203ENST00000535915 IGLV1-50A0A075B6I6 118 aa8.49□□□□□ -1.05
LDLR-203ENST00000535915 Q6ZRX8 168 aa8.49□□□□□ -1.05
LDLR-203ENST00000535915 LYSTQ99698 3801 aa8.49□□□□□ -1.05
LDLR-203ENST00000535915 ETDCA0A1B0GVM5 59 aa8.49□□□□□ -1.05
LDLR-203ENST00000535915 PRYO14603 147 aa8.49□□□□□ -1.05
LDLR-203ENST00000535915 DHRS4-AS1Q9P1J3 65 aa8.49□□□□□ -1.05
LDLR-203ENST00000535915 IGLV5-37A0A075B6J1 123 aa8.48□□□□□ -1.05
LDLR-203ENST00000535915 V9GYY9 64 aa8.48□□□□□ -1.05
LDLR-203ENST00000535915 C1orf195Q5TG92 126 aa8.48□□□□□ -1.05
LDLR-203ENST00000535915 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
LDLR-203ENST00000535915 Q9BRP9 147 aa8.47□□□□□ -1.05
LDLR-203ENST00000535915 COL7A1Q02388 2944 aa8.47□□□□□ -1.05
LDLR-203ENST00000535915 KRTAP4-16G5E9R7 235 aaPredicted RBP8.47□□□□□ -1.05
LDLR-203ENST00000535915 NDUFC1O43677 76 aa8.46□□□□□ -1.05
LDLR-203ENST00000535915 DNAH10Q8IVF4 4471 aa8.46□□□□□ -1.06
LDLR-203ENST00000535915 MRPL55Q7Z7F7 128 aaKnown RBP8.46□□□□□ -1.06
LDLR-203ENST00000535915 SPRR1AP35321 89 aa8.45□□□□□ -1.06
LDLR-203ENST00000535915 SEC61GP60059 68 aa8.45□□□□□ -1.06
LDLR-203ENST00000535915 C3orf84H3BNL1 204 aa8.45□□□□□ -1.06
LDLR-203ENST00000535915 MPLKIPQ8TAP9 179 aa8.45□□□□□ -1.06
LDLR-203ENST00000535915 MGAM2Q2M2H8 2515 aa8.45□□□□□ -1.06
LDLR-203ENST00000535915 IGLV5-48A0A075B6I7 105 aa8.44□□□□□ -1.06
LDLR-203ENST00000535915 NREPQ16612 68 aa8.44□□□□□ -1.06
LDLR-203ENST00000535915 ATP5EP56381 51 aaPredicted RBP8.44□□□□□ -1.06
LDLR-203ENST00000535915 ST20-AS1Q8NBB2 130 aa8.43□□□□□ -1.06
LDLR-203ENST00000535915 DNAH9Q9NYC9 4486 aa8.42□□□□□ -1.06
LDLR-203ENST00000535915 STAB2Q8WWQ8 2551 aa8.42□□□□□ -1.06
LDLR-203ENST00000535915 UBE2BP63146 152 aa8.42□□□□□ -1.06
LDLR-203ENST00000535915 Q8N9L7 120 aa8.41□□□□□ -1.06
LDLR-203ENST00000535915 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.06
LDLR-203ENST00000535915 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.06
LDLR-203ENST00000535915 ERC2-IT1O76042 136 aa8.4□□□□□ -1.06
LDLR-203ENST00000535915 REG3GQ6UW15 175 aa8.4□□□□□ -1.06
LDLR-203ENST00000535915 PSCAO43653 123 aa8.39□□□□□ -1.07
LDLR-203ENST00000535915 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
LDLR-203ENST00000535915 BPY2O14599 106 aa8.39□□□□□ -1.07
LDLR-203ENST00000535915 TMEM254Q8TBM7 123 aa8.39□□□□□ -1.07
LDLR-203ENST00000535915 IGKV2-24A0A0C4DH68 120 aa8.38□□□□□ -1.07
LDLR-203ENST00000535915 FAM229BQ4G0N7 80 aa8.38□□□□□ -1.07
LDLR-203ENST00000535915 UBE2DNLQ8IWF7 75 aa8.38□□□□□ -1.07
LDLR-203ENST00000535915 TNP2Q05952 138 aa8.38□□□□□ -1.07
LDLR-203ENST00000535915 A0A096LNI7 61 aa8.37□□□□□ -1.07
LDLR-203ENST00000535915 A0A1W2PNM2 257 aa8.37□□□□□ -1.07
LDLR-203ENST00000535915 IGKV4-1P06312 121 aa8.37□□□□□ -1.07
LDLR-203ENST00000535915 TENM2Q9NT68 2774 aa8.36□□□□□ -1.07
LDLR-203ENST00000535915 C16orf90A8MZG2 172 aa8.35□□□□□ -1.07
LDLR-203ENST00000535915 A0A1B0GW54 56 aa8.35□□□□□ -1.07
LDLR-203ENST00000535915 CNBPP62633 177 aaKnown RBP8.34□□□□□ -1.07
LDLR-203ENST00000535915 Q8NBF4 154 aa8.34□□□□□ -1.07
LDLR-203ENST00000535915 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.34□□□□□ -1.07
LDLR-203ENST00000535915 DNAH7Q8WXX0 4024 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms