RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 CGB3P0DN86 165 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 CGB7P0DN87 165 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 IGHV3-43DP0DP04 118 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 NDPQ00604 133 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 CHCHD10Q8WYQ3 142 aaPredicted RBP2.76□□□□□ -1.97
ITGB1-219ENST00000534049 RPL39LQ96EH5 51 aaKnown RBP2.76□□□□□ -1.97
ITGB1-219ENST00000534049 LINC00208Q96KT6 92 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 LINC01558Q9Y6Z2 57 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 MED13LQ71F56 2210 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 MED12Q93074 2177 aa2.76□□□□□ -1.97
ITGB1-219ENST00000534049 FBN1P35555 2871 aaKnown RBP2.75□□□□□ -1.97
ITGB1-219ENST00000534049 IGKV2-40A0A087WW87 121 aaPredicted RBP2.75□□□□□ -1.97
ITGB1-219ENST00000534049 IGHV3-72A0A0B4J1Y9 119 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 IGKV2-29A2NJV5 120 aaPredicted RBP2.75□□□□□ -1.97
ITGB1-219ENST00000534049 IGKV2D-40P01614 121 aaPredicted RBP2.75□□□□□ -1.97
ITGB1-219ENST00000534049 MGPP08493 103 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 BSPH1Q075Z2 132 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 NTM-AS1Q6ZSK4 140 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 Q8N814 137 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 ZNRF1Q8ND25 227 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 SMIM11BQ8TCY0 68 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 RNF5Q99942 180 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 HIGD2AQ9BW72 106 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 S4R3C0 116 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 SONP18583 2426 aaKnown RBP2.75□□□□□ -1.97
ITGB1-219ENST00000534049 CSPG4Q6UVK1 2322 aa2.75□□□□□ -1.97
ITGB1-219ENST00000534049 IGHV3-64A0A075B6Q5 118 aa2.74□□□□□ -1.97
ITGB1-219ENST00000534049 IGHV3-49A0A0A0MS15 119 aa2.74□□□□□ -1.97
ITGB1-219ENST00000534049 IGHV3-73A0A0B4J1V6 119 aa2.74□□□□□ -1.97
ITGB1-219ENST00000534049 I3L2K1 104 aa2.74□□□□□ -1.97
ITGB1-219ENST00000534049 IGKV1-17P01599 117 aa2.74□□□□□ -1.97
ITGB1-219ENST00000534049 RPL39P62891 51 aaKnown RBP2.74□□□□□ -1.97
ITGB1-219ENST00000534049 C9orf129Q5T035 196 aaKnown RBP2.74□□□□□ -1.97
ITGB1-219ENST00000534049 SMR3AQ99954 134 aa2.74□□□□□ -1.97
ITGB1-219ENST00000534049 SND1-IT1Q9HBX3 110 aa2.74□□□□□ -1.97
ITGB1-219ENST00000534049 MXRA5Q9NR99 2828 aa2.73□□□□□ -1.97
ITGB1-219ENST00000534049 ETDCA0A1B0GVM5 59 aa2.73□□□□□ -1.97
ITGB1-219ENST00000534049 LRCOL1A6NCL2 159 aa2.73□□□□□ -1.97
ITGB1-219ENST00000534049 LINC00315P59091 139 aa2.73□□□□□ -1.97
ITGB1-219ENST00000534049 CNBPP62633 177 aaKnown RBP2.73□□□□□ -1.97
ITGB1-219ENST00000534049 DEFB113Q30KQ7 82 aa2.73□□□□□ -1.97
ITGB1-219ENST00000534049 COL6A5A8TX70 2615 aa2.73□□□□□ -1.97
ITGB1-219ENST00000534049 HIVEP2P31629 2446 aa2.72□□□□□ -1.97
ITGB1-219ENST00000534049 TRGV2A0A075B6R0 118 aa2.72□□□□□ -1.97
ITGB1-219ENST00000534049 MRPL33O75394 65 aaKnown RBP2.72□□□□□ -1.97
ITGB1-219ENST00000534049 IGLV1-51P01701 117 aa2.72□□□□□ -1.97
ITGB1-219ENST00000534049 ROS1P08922 2347 aa2.72□□□□□ -1.97
ITGB1-219ENST00000534049 C17orf58Q2M2W7 97 aa2.72□□□□□ -1.97
ITGB1-219ENST00000534049 Q8TAT8 98 aa2.72□□□□□ -1.97
ITGB1-219ENST00000534049 COX7B2Q8TF08 81 aa2.72□□□□□ -1.97
ITGB1-219ENST00000534049 WFDC10AQ9H1F0 79 aa2.72□□□□□ -1.97
ITGB1-219ENST00000534049 PLAC8Q9NZF1 115 aa2.72□□□□□ -1.97
ITGB1-219ENST00000534049 A0A096LNT2 108 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV3-35A0A0C4DH35 117 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 TRBV6-4A0A1B0GX49 114 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 NDUFA4O00483 81 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 IGLV2-23P01705 113 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 IGKV4-1P06312 121 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 RNASE13Q5GAN3 156 aaKnown RBP2.71□□□□□ -1.98
ITGB1-219ENST00000534049 MUC7Q8TAX7 377 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 KCNQ1DNQ9H478 68 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 NACAE9PAV3 2078 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 DSCAMO60469 2012 aa2.71□□□□□ -1.98
ITGB1-219ENST00000534049 USF3Q68DE3 2245 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 PRKDCP78527 4128 aaKnown RBP2.7□□□□□ -1.98
ITGB1-219ENST00000534049 IGKV2-28A0A075B6P5 120 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV1-3A0A0C4DH29 117 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 K7EIM0 57 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 M0QY20 66 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 IGKV2D-28P01615 120 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV3-53P01767 116 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 COX7BP24311 80 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 Q6ZTI0 123 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 CNEP1R1Q8N9A8 125 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 CCL19Q99731 98 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 DHRS4-AS1Q9P1J3 65 aa2.7□□□□□ -1.98
ITGB1-219ENST00000534049 PRR14LQ5THK1 2151 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.69□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV3-15A0A0B4J1V0 119 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV3-48P01763 117 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 MSMBP08118 114 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 PRB4P10163 310 aaPredicted RBP2.69□□□□□ -1.98
ITGB1-219ENST00000534049 ROMO1P60602 79 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 SPAG11BQ08648 103 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 KPRPQ5T749 579 aaPredicted RBP2.69□□□□□ -1.98
ITGB1-219ENST00000534049 C1orf134Q5TEV5 83 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 SPAG11AQ6PDA7 123 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 GAFA1Q96PS6 74 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 CDKN2A-AS1Q9UH64 79 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 CMYA5Q8N3K9 4069 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 PLCE1Q9P212 2302 aa2.69□□□□□ -1.98
ITGB1-219ENST00000534049 TRRAPQ9Y4A5 3859 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 NBEAL1Q6ZS30 2694 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.68□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV3OR16-12A0A075B7B8 117 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV3OR16-8A0A075B7F1 116 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV3-21A0A0B4J1V1 117 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 RNASE3P12724 160 aaKnown RBP2.68□□□□□ -1.98
ITGB1-219ENST00000534049 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms