RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ACYP2P14621 99 aa7.5□□□□□ -1.21
AMBRA1-211ENST00000533727 RETNLBQ9BQ08 111 aa7.5□□□□□ -1.21
AMBRA1-211ENST00000533727 LINC00476Q8WZB0 136 aa7.5□□□□□ -1.21
AMBRA1-211ENST00000533727 A8MUN3 132 aa7.49□□□□□ -1.21
AMBRA1-211ENST00000533727 SPACA4Q8TDM5 124 aa7.49□□□□□ -1.21
AMBRA1-211ENST00000533727 C5orf42Q9H799 3197 aa7.49□□□□□ -1.21
AMBRA1-211ENST00000533727 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
AMBRA1-211ENST00000533727 ZNF292O60281 2723 aa7.49□□□□□ -1.21
AMBRA1-211ENST00000533727 CD164Q04900 197 aa7.49□□□□□ -1.21
AMBRA1-211ENST00000533727 KLKP1Q107X0 134 aa7.49□□□□□ -1.21
AMBRA1-211ENST00000533727 ZNF575Q86XF7 245 aa7.49□□□□□ -1.21
AMBRA1-211ENST00000533727 CYP4F30PQ9H0H9 118 aa7.49□□□□□ -1.21
AMBRA1-211ENST00000533727 CFAP46Q8IYW2 2715 aa7.48□□□□□ -1.21
AMBRA1-211ENST00000533727 CHTF8P0CG12 524 aa7.48□□□□□ -1.21
AMBRA1-211ENST00000533727 TRAV22A0A0B4J277 110 aa7.47□□□□□ -1.21
AMBRA1-211ENST00000533727 TLX1NBP0CAT3 122 aa7.47□□□□□ -1.21
AMBRA1-211ENST00000533727 CNBPP62633 177 aaKnown RBP7.45□□□□□ -1.22
AMBRA1-211ENST00000533727 CHD9Q3L8U1 2897 aa7.45□□□□□ -1.22
AMBRA1-211ENST00000533727 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
AMBRA1-211ENST00000533727 CASC10Q5T4H9 136 aa7.44□□□□□ -1.22
AMBRA1-211ENST00000533727 C15orf56Q8N910 161 aa7.44□□□□□ -1.22
AMBRA1-211ENST00000533727 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
AMBRA1-211ENST00000533727 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
AMBRA1-211ENST00000533727 SSBP3-AS1Q7Z2R9 100 aa7.43□□□□□ -1.22
AMBRA1-211ENST00000533727 ATRQ13535 2644 aa7.43□□□□□ -1.22
AMBRA1-211ENST00000533727 H7BZZ5 65 aa7.43□□□□□ -1.22
AMBRA1-211ENST00000533727 IGLV1-50A0A075B6I6 118 aa7.42□□□□□ -1.22
AMBRA1-211ENST00000533727 ZNF861PO60384 105 aa7.42□□□□□ -1.22
AMBRA1-211ENST00000533727 KCNQ1DNQ9H478 68 aa7.42□□□□□ -1.22
AMBRA1-211ENST00000533727 LAMA2P24043 3122 aaKnown RBP7.42□□□□□ -1.22
AMBRA1-211ENST00000533727 IGLV6-57P01721 117 aa7.41□□□□□ -1.22
AMBRA1-211ENST00000533727 PRUNE2Q8WUY3 3088 aa7.41□□□□□ -1.22
AMBRA1-211ENST00000533727 MAST4O15021 2626 aa7.41□□□□□ -1.22
AMBRA1-211ENST00000533727 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
AMBRA1-211ENST00000533727 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
AMBRA1-211ENST00000533727 CR1P17927 2039 aa7.4□□□□□ -1.22
AMBRA1-211ENST00000533727 COA5Q86WW8 74 aa7.39□□□□□ -1.23
AMBRA1-211ENST00000533727 LOC101927531A0A1B0GV80 90 aa7.38□□□□□ -1.23
AMBRA1-211ENST00000533727 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
AMBRA1-211ENST00000533727 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
AMBRA1-211ENST00000533727 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
AMBRA1-211ENST00000533727 KRTAP21-3Q3LHN1 58 aa7.36□□□□□ -1.23
AMBRA1-211ENST00000533727 LINC00313P59037 77 aa7.35□□□□□ -1.23
AMBRA1-211ENST00000533727 TRANK1O15050 2925 aa7.35□□□□□ -1.23
AMBRA1-211ENST00000533727 IGLV7-43P04211 117 aa7.35□□□□□ -1.23
AMBRA1-211ENST00000533727 FAM168BA1KXE4 195 aa7.35□□□□□ -1.23
AMBRA1-211ENST00000533727 K7EQZ3 153 aa7.35□□□□□ -1.23
AMBRA1-211ENST00000533727 LINC00528Q8N1L1 170 aa7.35□□□□□ -1.23
AMBRA1-211ENST00000533727 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
AMBRA1-211ENST00000533727 ST20-AS1Q8NBB2 130 aa7.34□□□□□ -1.23
AMBRA1-211ENST00000533727 LCA10Q71F78 164 aa7.34□□□□□ -1.23
AMBRA1-211ENST00000533727 BAHCC1Q9P281 2608 aa7.34□□□□□ -1.23
AMBRA1-211ENST00000533727 IGLV8-61A0A075B6I0 122 aa7.33□□□□□ -1.24
AMBRA1-211ENST00000533727 UQCR11O14957 56 aa7.33□□□□□ -1.24
AMBRA1-211ENST00000533727 LINC01600Q96MT4 127 aa7.32□□□□□ -1.24
AMBRA1-211ENST00000533727 A8MWP4 228 aa7.31□□□□□ -1.24
AMBRA1-211ENST00000533727 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
AMBRA1-211ENST00000533727 TNP2Q05952 138 aa7.31□□□□□ -1.24
AMBRA1-211ENST00000533727 C9orf129Q5T035 196 aaKnown RBP7.3□□□□□ -1.24
AMBRA1-211ENST00000533727 IGLV5-37A0A075B6J1 123 aa7.29□□□□□ -1.24
AMBRA1-211ENST00000533727 UNC79Q9P2D8 2635 aa7.29□□□□□ -1.24
AMBRA1-211ENST00000533727 PSORS1C2Q9UIG4 136 aa7.29□□□□□ -1.24
AMBRA1-211ENST00000533727 UNC80Q8N2C7 3258 aa7.28□□□□□ -1.24
AMBRA1-211ENST00000533727 LCE6AA0A183 80 aa7.28□□□□□ -1.24
AMBRA1-211ENST00000533727 PRR15Q8IV56 129 aa7.27□□□□□ -1.25
AMBRA1-211ENST00000533727 Q96NJ1 140 aa7.26□□□□□ -1.25
AMBRA1-211ENST00000533727 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
AMBRA1-211ENST00000533727 MRPL34Q9BQ48 92 aaKnown RBP7.25□□□□□ -1.25
AMBRA1-211ENST00000533727 A0A1W2PNN7 141 aa7.24□□□□□ -1.25
AMBRA1-211ENST00000533727 SPRR4Q96PI1 79 aa7.24□□□□□ -1.25
AMBRA1-211ENST00000533727 IGSF10Q6WRI0 2623 aa7.24□□□□□ -1.25
AMBRA1-211ENST00000533727 TRIOO75962 3097 aa7.22□□□□□ -1.25
AMBRA1-211ENST00000533727 COX6B2Q6YFQ2 88 aa7.22□□□□□ -1.25
AMBRA1-211ENST00000533727 CENPEQ02224 2701 aa7.21□□□□□ -1.25
AMBRA1-211ENST00000533727 CDC42SE1Q9NRR8 79 aa7.21□□□□□ -1.26
AMBRA1-211ENST00000533727 XIRP2A4UGR9 3374 aa7.2□□□□□ -1.26
AMBRA1-211ENST00000533727 SPANXA2-OT1Q8N9U9 137 aa7.2□□□□□ -1.26
AMBRA1-211ENST00000533727 IGFL1Q6UW32 110 aa7.19□□□□□ -1.26
AMBRA1-211ENST00000533727 Q8N377 158 aa7.19□□□□□ -1.26
AMBRA1-211ENST00000533727 FAM229BQ4G0N7 80 aa7.18□□□□□ -1.26
AMBRA1-211ENST00000533727 TEP1Q99973 2627 aaKnown RBP7.18□□□□□ -1.26
AMBRA1-211ENST00000533727 Q1T7F1 81 aa7.18□□□□□ -1.26
AMBRA1-211ENST00000533727 OBSCN-AS1Q96MR7 158 aa7.17□□□□□ -1.26
AMBRA1-211ENST00000533727 C8orf17Q9NRJ1 99 aa7.17□□□□□ -1.26
AMBRA1-211ENST00000533727 PLAC8Q9NZF1 115 aa7.17□□□□□ -1.26
AMBRA1-211ENST00000533727 DNAH14Q0VDD8 3507 aa7.16□□□□□ -1.26
AMBRA1-211ENST00000533727 SETXQ7Z333 2677 aaKnown RBP7.16□□□□□ -1.26
AMBRA1-211ENST00000533727 CDH23Q9H251 3354 aa7.16□□□□□ -1.26
AMBRA1-211ENST00000533727 STAB1Q9NY15 2570 aa7.16□□□□□ -1.26
AMBRA1-211ENST00000533727 COL6A5A8TX70 2615 aa7.15□□□□□ -1.27
AMBRA1-211ENST00000533727 CRIPTQ9P021 101 aa7.14□□□□□ -1.27
AMBRA1-211ENST00000533727 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
AMBRA1-211ENST00000533727 Q5XG85 94 aa7.14□□□□□ -1.27
AMBRA1-211ENST00000533727 WDFY4Q6ZS81 3184 aa7.13□□□□□ -1.27
AMBRA1-211ENST00000533727 OCR1Q9BZK8 76 aa7.13□□□□□ -1.27
AMBRA1-211ENST00000533727 RBM12B-AS1Q9P1G2 102 aa7.13□□□□□ -1.27
AMBRA1-211ENST00000533727 A0A1W2PNM2 257 aa7.11□□□□□ -1.27
AMBRA1-211ENST00000533727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
AMBRA1-211ENST00000533727 CHD6Q8TD26 2715 aa7.09□□□□□ -1.27
AMBRA1-211ENST00000533727 DSCR10P59022 87 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms