RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ETDCA0A1B0GVM5 59 aa9□□□□□ -0.97
CPSF1-205ENST00000531042 HSBP1L1C9JCN9 74 aa9□□□□□ -0.97
CPSF1-205ENST00000531042 H0Y8G0 127 aa9□□□□□ -0.97
CPSF1-205ENST00000531042 C4orf48Q5BLP8 95 aa9□□□□□ -0.97
CPSF1-205ENST00000531042 LCE2AQ5TA79 106 aaPredicted RBP8.99□□□□□ -0.97
CPSF1-205ENST00000531042 UQCR10Q9UDW1 63 aa8.99□□□□□ -0.97
CPSF1-205ENST00000531042 TSPEAR-AS2P59090 65 aa8.98□□□□□ -0.97
CPSF1-205ENST00000531042 ATOH7Q8N100 152 aa8.98□□□□□ -0.97
CPSF1-205ENST00000531042 DAND5Q8N907 189 aa8.98□□□□□ -0.97
CPSF1-205ENST00000531042 Q8NBF4 154 aa8.98□□□□□ -0.97
CPSF1-205ENST00000531042 LOC107984156A0A0G2JMH3 177 aa8.97□□□□□ -0.97
CPSF1-205ENST00000531042 LEPROTO15243 131 aa8.97□□□□□ -0.97
CPSF1-205ENST00000531042 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
CPSF1-205ENST00000531042 ARL17AQ8IVW1 177 aa8.97□□□□□ -0.97
CPSF1-205ENST00000531042 LINC00483Q53H64 154 aa8.96□□□□□ -0.98
CPSF1-205ENST00000531042 C14orf144Q96I85 54 aa8.96□□□□□ -0.98
CPSF1-205ENST00000531042 B5MCH6 92 aa8.95□□□□□ -0.98
CPSF1-205ENST00000531042 PLNP26678 52 aa8.95□□□□□ -0.98
CPSF1-205ENST00000531042 TRBV10-2A0A0K0K1G8 114 aa8.94□□□□□ -0.98
CPSF1-205ENST00000531042 SPINK1P00995 79 aa8.94□□□□□ -0.98
CPSF1-205ENST00000531042 J3QQQ9 107 aa8.93□□□□□ -0.98
CPSF1-205ENST00000531042 ERC2-IT1O76042 136 aa8.93□□□□□ -0.98
CPSF1-205ENST00000531042 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
CPSF1-205ENST00000531042 DPM2O94777 84 aa8.92□□□□□ -0.98
CPSF1-205ENST00000531042 PMCHL2Q9BQD1 86 aa8.92□□□□□ -0.98
CPSF1-205ENST00000531042 IGKCP01834 107 aa8.91□□□□□ -0.98
CPSF1-205ENST00000531042 NMUP48645 174 aa8.91□□□□□ -0.98
CPSF1-205ENST00000531042 KRTAP13-3Q3SY46 172 aa8.91□□□□□ -0.98
CPSF1-205ENST00000531042 Q9BRP9 147 aa8.91□□□□□ -0.98
CPSF1-205ENST00000531042 KRTAP9-2Q9BYQ4 174 aa8.91□□□□□ -0.98
CPSF1-205ENST00000531042 SPANXB1Q9NS25 103 aaPredicted RBP8.91□□□□□ -0.98
CPSF1-205ENST00000531042 M0R143 59 aa8.9□□□□□ -0.98
CPSF1-205ENST00000531042 HERVK_113P61574 105 aa8.9□□□□□ -0.98
CPSF1-205ENST00000531042 SLC25A34Q6PIV7 304 aa8.9□□□□□ -0.98
CPSF1-205ENST00000531042 Q6ZRX8 168 aa8.9□□□□□ -0.98
CPSF1-205ENST00000531042 IGLV9-49A0A0B4J1Y8 123 aa8.89□□□□□ -0.99
CPSF1-205ENST00000531042 NDUFC2O95298 119 aa8.89□□□□□ -0.99
CPSF1-205ENST00000531042 COX8AP10176 69 aa8.89□□□□□ -0.99
CPSF1-205ENST00000531042 LGALS3P17931 250 aaKnown RBP8.89□□□□□ -0.99
CPSF1-205ENST00000531042 MOBPQ13875 183 aa8.89□□□□□ -0.99
CPSF1-205ENST00000531042 SSBP3-AS1Q7Z2R9 100 aa8.89□□□□□ -0.99
CPSF1-205ENST00000531042 IGLV6-57P01721 117 aa8.88□□□□□ -0.99
CPSF1-205ENST00000531042 S100A7L2Q5SY68 101 aa8.88□□□□□ -0.99
CPSF1-205ENST00000531042 DLEU1O43261 78 aa8.87□□□□□ -0.99
CPSF1-205ENST00000531042 RPS29P62273 56 aaKnown RBP8.87□□□□□ -0.99
CPSF1-205ENST00000531042 ANKRD39Q53RE8 183 aa8.87□□□□□ -0.99
CPSF1-205ENST00000531042 SNHG12Q9BXW3 62 aa8.86□□□□□ -0.99
CPSF1-205ENST00000531042 TRAV23DV6A0A075B6W5 121 aa8.85□□□□□ -0.99
CPSF1-205ENST00000531042 EIF4EBP3O60516 100 aaPredicted RBP8.85□□□□□ -0.99
CPSF1-205ENST00000531042 ASB16-AS1Q495Z4 193 aa8.85□□□□□ -0.99
CPSF1-205ENST00000531042 ADAMTSL4-AS1Q5T5F5 129 aa8.85□□□□□ -0.99
CPSF1-205ENST00000531042 SOSTDC1Q6X4U4 206 aa8.85□□□□□ -0.99
CPSF1-205ENST00000531042 Q8N377 158 aa8.85□□□□□ -0.99
CPSF1-205ENST00000531042 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
CPSF1-205ENST00000531042 NPC2P61916 151 aa8.84□□□□□ -0.99
CPSF1-205ENST00000531042 E9PLD3 99 aa8.82□□□□□ -1
CPSF1-205ENST00000531042 SLC25A20O43772 301 aa8.82□□□□□ -1
CPSF1-205ENST00000531042 ZNF73O43830 326 aaPredicted RBP8.82□□□□□ -1
CPSF1-205ENST00000531042 C9orf153Q5TBE3 101 aa8.8□□□□□ -1
CPSF1-205ENST00000531042 C2orf91Q6ZV80 131 aa8.8□□□□□ -1
CPSF1-205ENST00000531042 SEC61BP60468 96 aaKnown RBP8.79□□□□□ -1
CPSF1-205ENST00000531042 COL5A1-AS1Q5SY13 56 aa8.79□□□□□ -1
CPSF1-205ENST00000531042 ST20-AS1Q8NBB2 130 aa8.79□□□□□ -1
CPSF1-205ENST00000531042 HIGD1BQ9P298 99 aa8.79□□□□□ -1
CPSF1-205ENST00000531042 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
CPSF1-205ENST00000531042 CBY1Q9Y3M2 126 aa8.78□□□□□ -1
CPSF1-205ENST00000531042 HINT1P49773 126 aaPredicted RBP8.77□□□□□ -1.01
CPSF1-205ENST00000531042 PCP2Q8IVA1 136 aa8.77□□□□□ -1.01
CPSF1-205ENST00000531042 LITAFQ99732 161 aa8.77□□□□□ -1.01
CPSF1-205ENST00000531042 HSD52Q0P140 79 aa8.76□□□□□ -1.01
CPSF1-205ENST00000531042 BATFQ16520 125 aa8.76□□□□□ -1.01
CPSF1-205ENST00000531042 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
CPSF1-205ENST00000531042 SPANXCQ9NY87 97 aa8.76□□□□□ -1.01
CPSF1-205ENST00000531042 BVES-AS1Q5T3Y7 98 aa8.75□□□□□ -1.01
CPSF1-205ENST00000531042 TIMM17BO60830 172 aa8.74□□□□□ -1.01
CPSF1-205ENST00000531042 XP32Q5T750 250 aa8.74□□□□□ -1.01
CPSF1-205ENST00000531042 OR13C6PQ8NH95 151 aa8.74□□□□□ -1.01
CPSF1-205ENST00000531042 SPRR1BP22528 89 aa8.73□□□□□ -1.01
CPSF1-205ENST00000531042 A0A1B0GV90 55 aa8.72□□□□□ -1.01
CPSF1-205ENST00000531042 LINC01547P58512 204 aaPredicted RBP8.72□□□□□ -1.01
CPSF1-205ENST00000531042 TAL2Q16559 108 aa8.72□□□□□ -1.01
CPSF1-205ENST00000531042 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
CPSF1-205ENST00000531042 SPANXDQ9BXN6 97 aa8.71□□□□□ -1.02
CPSF1-205ENST00000531042 ZNF815PA8K554 130 aa8.7□□□□□ -1.02
CPSF1-205ENST00000531042 TTTY13Q9BZ97 58 aa8.7□□□□□ -1.02
CPSF1-205ENST00000531042 A6NDN8 102 aa8.68□□□□□ -1.02
CPSF1-205ENST00000531042 ELOF1P60002 83 aaKnown RBP8.68□□□□□ -1.02
CPSF1-205ENST00000531042 LIMD2Q9BT23 127 aa8.68□□□□□ -1.02
CPSF1-205ENST00000531042 COX7BP24311 80 aa8.67□□□□□ -1.02
CPSF1-205ENST00000531042 C6orf99Q4VX62 202 aa8.67□□□□□ -1.02
CPSF1-205ENST00000531042 HRCT1Q6UXD1 115 aa8.67□□□□□ -1.02
CPSF1-205ENST00000531042 LAMTOR3Q9UHA4 124 aa8.67□□□□□ -1.02
CPSF1-205ENST00000531042 KRTAP9-6A0A140TA67 174 aa8.65□□□□□ -1.02
CPSF1-205ENST00000531042 CEND1Q8N111 149 aa8.65□□□□□ -1.02
CPSF1-205ENST00000531042 SCGB1D4Q6XE38 83 aa8.64□□□□□ -1.03
CPSF1-205ENST00000531042 TAX1BP3O14907 124 aa8.63□□□□□ -1.03
CPSF1-205ENST00000531042 HIST1H4GQ99525 98 aa8.63□□□□□ -1.03
CPSF1-205ENST00000531042 TRBV7-6A0A0J9YX20 115 aa8.62□□□□□ -1.03
CPSF1-205ENST00000531042 Q1RN00 199 aa8.62□□□□□ -1.03
CPSF1-205ENST00000531042 DEFB105AQ8NG35 78 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms