RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 B5MCH6 92 aa9.01□□□□□ -0.97
CCDC90B-215ENST00000529745 EIF4EBP3O60516 100 aaPredicted RBP9.01□□□□□ -0.97
CCDC90B-215ENST00000529745 S100A1P23297 94 aa9□□□□□ -0.97
CCDC90B-215ENST00000529745 AKR1D1P51857 326 aa9□□□□□ -0.97
CCDC90B-215ENST00000529745 KRTDAPP60985 99 aa9□□□□□ -0.97
CCDC90B-215ENST00000529745 SMCR5Q8TEV8 140 aa9□□□□□ -0.97
CCDC90B-215ENST00000529745 LPAP08519 4548 aa8.99□□□□□ -0.97
CCDC90B-215ENST00000529745 LINC00304Q8N9R0 145 aa8.99□□□□□ -0.97
CCDC90B-215ENST00000529745 C20orf202A1L168 122 aa8.98□□□□□ -0.97
CCDC90B-215ENST00000529745 ZNF815PA8K554 130 aa8.98□□□□□ -0.97
CCDC90B-215ENST00000529745 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
CCDC90B-215ENST00000529745 SPANXCQ9NY87 97 aa8.98□□□□□ -0.97
CCDC90B-215ENST00000529745 MUC2Q02817 5179 aa8.98□□□□□ -0.97
CCDC90B-215ENST00000529745 LINC00483Q53H64 154 aa8.97□□□□□ -0.97
CCDC90B-215ENST00000529745 S100A7L2Q5SY68 101 aa8.97□□□□□ -0.97
CCDC90B-215ENST00000529745 Q6ZRX8 168 aa8.97□□□□□ -0.97
CCDC90B-215ENST00000529745 C3orf22Q8N5N4 141 aa8.97□□□□□ -0.97
CCDC90B-215ENST00000529745 KRTAP4-8Q9BYQ9 185 aa8.97□□□□□ -0.97
CCDC90B-215ENST00000529745 CBY1Q9Y3M2 126 aa8.97□□□□□ -0.97
CCDC90B-215ENST00000529745 TRAV23DV6A0A075B6W5 121 aa8.96□□□□□ -0.98
CCDC90B-215ENST00000529745 TSPAN13O95857 204 aa8.96□□□□□ -0.98
CCDC90B-215ENST00000529745 NPC2P61916 151 aa8.96□□□□□ -0.98
CCDC90B-215ENST00000529745 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.98
CCDC90B-215ENST00000529745 PRR4Q16378 134 aa8.95□□□□□ -0.98
CCDC90B-215ENST00000529745 Q9BRP9 147 aa8.95□□□□□ -0.98
CCDC90B-215ENST00000529745 SPANXDQ9BXN6 97 aa8.95□□□□□ -0.98
CCDC90B-215ENST00000529745 TTTY13Q9BZ97 58 aa8.95□□□□□ -0.98
CCDC90B-215ENST00000529745 ANKRD39Q53RE8 183 aa8.94□□□□□ -0.98
CCDC90B-215ENST00000529745 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
CCDC90B-215ENST00000529745 JOSD1Q15040 202 aaPredicted RBP8.93□□□□□ -0.98
CCDC90B-215ENST00000529745 SPAG11AQ6PDA7 123 aa8.93□□□□□ -0.98
CCDC90B-215ENST00000529745 HIST3H2BBQ8N257 126 aa8.93□□□□□ -0.98
CCDC90B-215ENST00000529745 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
CCDC90B-215ENST00000529745 SNRPEP62304 92 aaKnown RBP8.92□□□□□ -0.98
CCDC90B-215ENST00000529745 C5orf52A6NGY3 159 aa8.91□□□□□ -0.98
CCDC90B-215ENST00000529745 Q6ZVH6 145 aa8.91□□□□□ -0.98
CCDC90B-215ENST00000529745 LINC00518Q8N0U6 118 aa8.91□□□□□ -0.98
CCDC90B-215ENST00000529745 HIST1H2BLQ99880 126 aa8.9□□□□□ -0.98
CCDC90B-215ENST00000529745 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
CCDC90B-215ENST00000529745 IFITM1P13164 125 aa8.89□□□□□ -0.99
CCDC90B-215ENST00000529745 SCGB1D4Q6XE38 83 aa8.89□□□□□ -0.99
CCDC90B-215ENST00000529745 ATOH7Q8N100 152 aa8.89□□□□□ -0.99
CCDC90B-215ENST00000529745 COPS9Q8WXC6 57 aa8.89□□□□□ -0.99
CCDC90B-215ENST00000529745 HINT1P49773 126 aaPredicted RBP8.88□□□□□ -0.99
CCDC90B-215ENST00000529745 GAGE2AQ6NT46 116 aa8.87□□□□□ -0.99
CCDC90B-215ENST00000529745 S100A2P29034 98 aa8.86□□□□□ -0.99
CCDC90B-215ENST00000529745 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
CCDC90B-215ENST00000529745 PCP2Q8IVA1 136 aa8.86□□□□□ -0.99
CCDC90B-215ENST00000529745 OR13C6PQ8NH95 151 aa8.86□□□□□ -0.99
CCDC90B-215ENST00000529745 Q8NBF4 154 aa8.85□□□□□ -0.99
CCDC90B-215ENST00000529745 SPINK1P00995 79 aa8.84□□□□□ -0.99
CCDC90B-215ENST00000529745 ELOF1P60002 83 aaKnown RBP8.84□□□□□ -0.99
CCDC90B-215ENST00000529745 RPS29P62273 56 aaKnown RBP8.84□□□□□ -0.99
CCDC90B-215ENST00000529745 TPRXLQ17RH7 258 aa8.84□□□□□ -0.99
CCDC90B-215ENST00000529745 TRBV7-6A0A0J9YX20 115 aa8.83□□□□□ -1
CCDC90B-215ENST00000529745 S100A6P06703 90 aa8.83□□□□□ -1
CCDC90B-215ENST00000529745 SPRR1BP22528 89 aa8.83□□□□□ -1
CCDC90B-215ENST00000529745 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
CCDC90B-215ENST00000529745 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
CCDC90B-215ENST00000529745 MOBPQ13875 183 aa8.81□□□□□ -1
CCDC90B-215ENST00000529745 FP248Q71RG6 208 aaPredicted RBP8.81□□□□□ -1
CCDC90B-215ENST00000529745 MUSTN1Q8IVN3 82 aa8.81□□□□□ -1
CCDC90B-215ENST00000529745 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.8□□□□□ -1
CCDC90B-215ENST00000529745 C6orf99Q4VX62 202 aa8.8□□□□□ -1
CCDC90B-215ENST00000529745 IGLV7-46A0A075B6I9 117 aa8.79□□□□□ -1
CCDC90B-215ENST00000529745 IGLV9-49A0A0B4J1Y8 123 aa8.79□□□□□ -1
CCDC90B-215ENST00000529745 COX7BP24311 80 aa8.79□□□□□ -1
CCDC90B-215ENST00000529745 ST20-AS1Q8NBB2 130 aa8.79□□□□□ -1
CCDC90B-215ENST00000529745 HSBP1L1C9JCN9 74 aa8.78□□□□□ -1
CCDC90B-215ENST00000529745 A0A1B0GWB2 263 aa8.77□□□□□ -1.01
CCDC90B-215ENST00000529745 TRAV13-2A0A0B4J235 113 aa8.76□□□□□ -1.01
CCDC90B-215ENST00000529745 SLC25A34Q6PIV7 304 aa8.76□□□□□ -1.01
CCDC90B-215ENST00000529745 CRCT1Q9UGL9 99 aa8.75□□□□□ -1.01
CCDC90B-215ENST00000529745 A4D1N5 150 aa8.74□□□□□ -1.01
CCDC90B-215ENST00000529745 A6NDN8 102 aa8.74□□□□□ -1.01
CCDC90B-215ENST00000529745 Q8N377 158 aa8.74□□□□□ -1.01
CCDC90B-215ENST00000529745 C9orf153Q5TBE3 101 aa8.73□□□□□ -1.01
CCDC90B-215ENST00000529745 IGLV5-48A0A075B6I7 105 aa8.71□□□□□ -1.02
CCDC90B-215ENST00000529745 SCGB1D1O95968 90 aa8.71□□□□□ -1.02
CCDC90B-215ENST00000529745 SMIM11BQ8TCY0 68 aa8.71□□□□□ -1.02
CCDC90B-215ENST00000529745 CDIP1Q9H305 208 aa8.71□□□□□ -1.02
CCDC90B-215ENST00000529745 LAMTOR3Q9UHA4 124 aa8.71□□□□□ -1.02
CCDC90B-215ENST00000529745 TEX49A0A1B0GTD5 131 aa8.7□□□□□ -1.02
CCDC90B-215ENST00000529745 DLEU1O43261 78 aa8.7□□□□□ -1.02
CCDC90B-215ENST00000529745 SLC25A20O43772 301 aa8.7□□□□□ -1.02
CCDC90B-215ENST00000529745 COX8AP10176 69 aa8.7□□□□□ -1.02
CCDC90B-215ENST00000529745 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
CCDC90B-215ENST00000529745 TAL2Q16559 108 aa8.69□□□□□ -1.02
CCDC90B-215ENST00000529745 KRTAP13-3Q3SY46 172 aa8.69□□□□□ -1.02
CCDC90B-215ENST00000529745 NHP2Q9NX24 153 aaKnown RBP8.69□□□□□ -1.02
CCDC90B-215ENST00000529745 FSIP2Q5CZC0 6907 aa8.68□□□□□ -1.02
CCDC90B-215ENST00000529745 MUC17Q685J3 4493 aa8.67□□□□□ -1.02
CCDC90B-215ENST00000529745 SMIM29Q86T20 159 aa8.67□□□□□ -1.02
CCDC90B-215ENST00000529745 CD164Q04900 197 aa8.66□□□□□ -1.02
CCDC90B-215ENST00000529745 VAMP3Q15836 100 aa8.64□□□□□ -1.03
CCDC90B-215ENST00000529745 LIMD2Q9BT23 127 aa8.64□□□□□ -1.03
CCDC90B-215ENST00000529745 Q1RN00 199 aa8.63□□□□□ -1.03
CCDC90B-215ENST00000529745 DEFB105AQ8NG35 78 aa8.63□□□□□ -1.03
CCDC90B-215ENST00000529745 HIST1H4GQ99525 98 aa8.63□□□□□ -1.03
CCDC90B-215ENST00000529745 PRO1933Q9H354 126 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms