RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 LINC00337Q8N6G1 96 aa13.01□□□□□ -0.33
PKP3-205ENST00000527442 MRPL55Q7Z7F7 128 aaKnown RBP13□□□□□ -0.33
PKP3-205ENST00000527442 DPH3Q96FX2 82 aa13□□□□□ -0.33
PKP3-205ENST00000527442 NHP2Q9NX24 153 aaKnown RBP13□□□□□ -0.33
PKP3-205ENST00000527442 TRAV13-2A0A0B4J235 113 aa12.99□□□□□ -0.33
PKP3-205ENST00000527442 C7orf33Q8WU49 177 aa12.99□□□□□ -0.33
PKP3-205ENST00000527442 A6NDN8 102 aa12.97□□□□□ -0.33
PKP3-205ENST00000527442 LBHQ53QV2 105 aaPredicted RBP12.97□□□□□ -0.33
PKP3-205ENST00000527442 LINC01600Q96MT4 127 aa12.97□□□□□ -0.33
PKP3-205ENST00000527442 IGLV6-57P01721 117 aa12.96□□□□□ -0.33
PKP3-205ENST00000527442 RAB37Q96AX2 223 aa12.96□□□□□ -0.33
PKP3-205ENST00000527442 S100A7L2Q5SY68 101 aa12.95□□□□□ -0.34
PKP3-205ENST00000527442 PHF5AQ7RTV0 110 aaKnown RBP12.95□□□□□ -0.34
PKP3-205ENST00000527442 LINC00167Q96N53 147 aa12.95□□□□□ -0.34
PKP3-205ENST00000527442 SNHG12Q9BXW3 62 aa12.95□□□□□ -0.34
PKP3-205ENST00000527442 TMEM126AQ9H061 195 aa12.95□□□□□ -0.34
PKP3-205ENST00000527442 TRBV10-3A0A0K0K1G6 114 aa12.94□□□□□ -0.34
PKP3-205ENST00000527442 K7ERJ3 54 aa12.94□□□□□ -0.34
PKP3-205ENST00000527442 BATFQ16520 125 aa12.94□□□□□ -0.34
PKP3-205ENST00000527442 RPL13AP40429 203 aaKnown RBP12.93□□□□□ -0.34
PKP3-205ENST00000527442 PRO1854Q9UHT4 67 aa12.93□□□□□ -0.34
PKP3-205ENST00000527442 IGLV1-50A0A075B6I6 118 aa12.92□□□□□ -0.34
PKP3-205ENST00000527442 GAGE10A6NGK3 116 aa12.92□□□□□ -0.34
PKP3-205ENST00000527442 OR13C6PQ8NH95 151 aa12.92□□□□□ -0.34
PKP3-205ENST00000527442 CBY1Q9Y3M2 126 aa12.9□□□□□ -0.34
PKP3-205ENST00000527442 PRYO14603 147 aa12.89□□□□□ -0.35
PKP3-205ENST00000527442 KCNQ1DNQ9H478 68 aa12.89□□□□□ -0.35
PKP3-205ENST00000527442 RPL37AP8A6NKH3 93 aa12.88□□□□□ -0.35
PKP3-205ENST00000527442 UBE2BP63146 152 aa12.88□□□□□ -0.35
PKP3-205ENST00000527442 TRAV23DV6A0A075B6W5 121 aa12.87□□□□□ -0.35
PKP3-205ENST00000527442 KRTAP10-8P60410 259 aa12.87□□□□□ -0.35
PKP3-205ENST00000527442 KRTAP11-1Q8IUC1 163 aa12.86□□□□□ -0.35
PKP3-205ENST00000527442 SMIM11BQ8TCY0 68 aa12.85□□□□□ -0.35
PKP3-205ENST00000527442 TSPAN13O95857 204 aa12.84□□□□□ -0.35
PKP3-205ENST00000527442 SPRR1AP35321 89 aa12.84□□□□□ -0.35
PKP3-205ENST00000527442 H7C2G1 150 aa12.83□□□□□ -0.36
PKP3-205ENST00000527442 RPL28P46779 137 aaKnown RBP12.83□□□□□ -0.36
PKP3-205ENST00000527442 Q1RN00 199 aa12.83□□□□□ -0.36
PKP3-205ENST00000527442 COL5A1-AS1Q5SY13 56 aa12.83□□□□□ -0.36
PKP3-205ENST00000527442 ZNF73O43830 326 aaPredicted RBP12.82□□□□□ -0.36
PKP3-205ENST00000527442 REG3GQ6UW15 175 aa12.82□□□□□ -0.36
PKP3-205ENST00000527442 DIRC1Q969H9 104 aa12.81□□□□□ -0.36
PKP3-205ENST00000527442 KRTAP4-16G5E9R7 235 aaPredicted RBP12.79□□□□□ -0.36
PKP3-205ENST00000527442 TAX1BP3O14907 124 aa12.79□□□□□ -0.36
PKP3-205ENST00000527442 C6orf99Q4VX62 202 aa12.79□□□□□ -0.36
PKP3-205ENST00000527442 SPINK6Q6UWN8 80 aa12.79□□□□□ -0.36
PKP3-205ENST00000527442 PSORS1C2Q9UIG4 136 aa12.78□□□□□ -0.36
PKP3-205ENST00000527442 TRBV7-6A0A0J9YX20 115 aa12.77□□□□□ -0.37
PKP3-205ENST00000527442 TRIAP1O43715 76 aa12.76□□□□□ -0.37
PKP3-205ENST00000527442 BCE1O60756 84 aa12.75□□□□□ -0.37
PKP3-205ENST00000527442 LPAP08519 4548 aa12.75□□□□□ -0.37
PKP3-205ENST00000527442 C9orf118A6NHY6 69 aa12.74□□□□□ -0.37
PKP3-205ENST00000527442 ETDCA0A1B0GVM5 59 aa12.73□□□□□ -0.37
PKP3-205ENST00000527442 PSMB2P49721 201 aa12.73□□□□□ -0.37
PKP3-205ENST00000527442 ELOF1P60002 83 aaKnown RBP12.73□□□□□ -0.37
PKP3-205ENST00000527442 B5MCH6 92 aa12.72□□□□□ -0.37
PKP3-205ENST00000527442 Q6ZRX8 168 aa12.72□□□□□ -0.37
PKP3-205ENST00000527442 COX7BP24311 80 aa12.71□□□□□ -0.37
PKP3-205ENST00000527442 VAMP3Q15836 100 aa12.71□□□□□ -0.37
PKP3-205ENST00000527442 C1orf137Q5JT78 98 aa12.71□□□□□ -0.37
PKP3-205ENST00000527442 H0Y9J4 135 aa12.7□□□□□ -0.38
PKP3-205ENST00000527442 H3BUT2 72 aa12.7□□□□□ -0.38
PKP3-205ENST00000527442 COX6CP09669 75 aa12.7□□□□□ -0.38
PKP3-205ENST00000527442 FAM19A1Q7Z5A9 133 aa12.7□□□□□ -0.38
PKP3-205ENST00000527442 KRTAP13-1Q8IUC0 172 aa12.7□□□□□ -0.38
PKP3-205ENST00000527442 NAA38Q9BRA0 125 aaKnown RBP12.7□□□□□ -0.38
PKP3-205ENST00000527442 H0YGX0 51 aa12.69□□□□□ -0.38
PKP3-205ENST00000527442 PRLHP81277 87 aa12.67□□□□□ -0.38
PKP3-205ENST00000527442 LYRM7Q5U5X0 104 aa12.67□□□□□ -0.38
PKP3-205ENST00000527442 IGLV7-43P04211 117 aa12.66□□□□□ -0.38
PKP3-205ENST00000527442 UBE2AP49459 152 aa12.66□□□□□ -0.38
PKP3-205ENST00000527442 A0A1W2PPM0 123 aa12.65□□□□□ -0.38
PKP3-205ENST00000527442 Q9BRP9 147 aa12.64□□□□□ -0.39
PKP3-205ENST00000527442 SCGB1C2P0DMR2 95 aa12.63□□□□□ -0.39
PKP3-205ENST00000527442 LINC00575Q6W349 94 aa12.63□□□□□ -0.39
PKP3-205ENST00000527442 ZNF861PO60384 105 aa12.62□□□□□ -0.39
PKP3-205ENST00000527442 FAM218AQ96MZ4 157 aa12.62□□□□□ -0.39
PKP3-205ENST00000527442 DHRS4-AS1Q9P1J3 65 aa12.62□□□□□ -0.39
PKP3-205ENST00000527442 A0A1B0GX51 115 aa12.61□□□□□ -0.39
PKP3-205ENST00000527442 SMCR5Q8TEV8 140 aa12.61□□□□□ -0.39
PKP3-205ENST00000527442 CLEC2BQ92478 149 aa12.61□□□□□ -0.39
PKP3-205ENST00000527442 FABP2P12104 132 aa12.6□□□□□ -0.39
PKP3-205ENST00000527442 LST1O00453 97 aa12.59□□□□□ -0.39
PKP3-205ENST00000527442 SLC25A20O43772 301 aa12.59□□□□□ -0.39
PKP3-205ENST00000527442 HIGD2AQ9BW72 106 aa12.58□□□□□ -0.4
PKP3-205ENST00000527442 TRBV20-1A0A075B6N2 111 aa12.57□□□□□ -0.4
PKP3-205ENST00000527442 hADV29S1A0JD25 119 aa12.57□□□□□ -0.4
PKP3-205ENST00000527442 TCL1BO95988 128 aa12.57□□□□□ -0.4
PKP3-205ENST00000527442 TRACP01848 142 aa12.55□□□□□ -0.4
PKP3-205ENST00000527442 ATXN8Q156A1 80 aa12.55□□□□□ -0.4
PKP3-205ENST00000527442 ERC2-IT1O76042 136 aa12.54□□□□□ -0.4
PKP3-205ENST00000527442 SNCGO76070 127 aa12.54□□□□□ -0.4
PKP3-205ENST00000527442 SPCS1Q9Y6A9 102 aa12.54□□□□□ -0.4
PKP3-205ENST00000527442 PRR26Q8N8Z3 221 aa12.52□□□□□ -0.41
PKP3-205ENST00000527442 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.51□□□□□ -0.41
PKP3-205ENST00000527442 KRTAP9-2Q9BYQ4 174 aa12.51□□□□□ -0.41
PKP3-205ENST00000527442 K7EP34 96 aa12.5□□□□□ -0.41
PKP3-205ENST00000527442 DNAL4O96015 105 aa12.5□□□□□ -0.41
PKP3-205ENST00000527442 Q6ZQY7 126 aa12.5□□□□□ -0.41
PKP3-205ENST00000527442 IGLV5-48A0A075B6I7 105 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms