RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 IGLV6-57P01721 117 aa8.52□□□□□ -1.05
MRPS28-209ENST00000522987 ARL17AQ8IVW1 177 aa8.52□□□□□ -1.05
MRPS28-209ENST00000522987 TRGC2P03986 189 aa8.51□□□□□ -1.05
MRPS28-209ENST00000522987 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
MRPS28-209ENST00000522987 DPM2O94777 84 aa8.5□□□□□ -1.05
MRPS28-209ENST00000522987 PLNP26678 52 aa8.5□□□□□ -1.05
MRPS28-209ENST00000522987 HERVK_113P61574 105 aa8.5□□□□□ -1.05
MRPS28-209ENST00000522987 ADAMTSL4-AS1Q5T5F5 129 aa8.5□□□□□ -1.05
MRPS28-209ENST00000522987 ZNF73O43830 326 aaPredicted RBP8.49□□□□□ -1.05
MRPS28-209ENST00000522987 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
MRPS28-209ENST00000522987 NDUFC2O95298 119 aa8.48□□□□□ -1.05
MRPS28-209ENST00000522987 IGKCP01834 107 aa8.48□□□□□ -1.05
MRPS28-209ENST00000522987 JOSD1Q15040 202 aaPredicted RBP8.48□□□□□ -1.05
MRPS28-209ENST00000522987 NMUP48645 174 aa8.47□□□□□ -1.05
MRPS28-209ENST00000522987 A0A0J9YXY3 114 aa8.46□□□□□ -1.06
MRPS28-209ENST00000522987 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
MRPS28-209ENST00000522987 OR13C6PQ8NH95 151 aa8.46□□□□□ -1.06
MRPS28-209ENST00000522987 HSPB8Q9UJY1 196 aa8.46□□□□□ -1.06
MRPS28-209ENST00000522987 PCOTHQ58A44 107 aa8.45□□□□□ -1.06
MRPS28-209ENST00000522987 IGLV8-61A0A075B6I0 122 aa8.42□□□□□ -1.06
MRPS28-209ENST00000522987 HINT1P49773 126 aaPredicted RBP8.42□□□□□ -1.06
MRPS28-209ENST00000522987 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
MRPS28-209ENST00000522987 CRCT1Q9UGL9 99 aa8.41□□□□□ -1.06
MRPS28-209ENST00000522987 H7C2G1 150 aa8.4□□□□□ -1.06
MRPS28-209ENST00000522987 Q1RN00 199 aa8.4□□□□□ -1.06
MRPS28-209ENST00000522987 DEFB105AQ8NG35 78 aa8.4□□□□□ -1.06
MRPS28-209ENST00000522987 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
MRPS28-209ENST00000522987 FSIP2Q5CZC0 6907 aa8.39□□□□□ -1.07
MRPS28-209ENST00000522987 E9PLD3 99 aa8.39□□□□□ -1.07
MRPS28-209ENST00000522987 LIMD2Q9BT23 127 aa8.39□□□□□ -1.07
MRPS28-209ENST00000522987 MT1HP80294 61 aa8.38□□□□□ -1.07
MRPS28-209ENST00000522987 LITAFQ99732 161 aa8.38□□□□□ -1.07
MRPS28-209ENST00000522987 TTTY13Q9BZ97 58 aa8.38□□□□□ -1.07
MRPS28-209ENST00000522987 SPRR1BP22528 89 aa8.37□□□□□ -1.07
MRPS28-209ENST00000522987 SPANXCQ9NY87 97 aa8.37□□□□□ -1.07
MRPS28-209ENST00000522987 LAMTOR3Q9UHA4 124 aa8.37□□□□□ -1.07
MRPS28-209ENST00000522987 A0A0G2JQZ4 141 aa8.36□□□□□ -1.07
MRPS28-209ENST00000522987 DHRS4-AS1Q9P1J3 65 aa8.36□□□□□ -1.07
MRPS28-209ENST00000522987 COX7BP24311 80 aa8.35□□□□□ -1.07
MRPS28-209ENST00000522987 TAL2Q16559 108 aa8.35□□□□□ -1.07
MRPS28-209ENST00000522987 C6orf99Q4VX62 202 aa8.35□□□□□ -1.07
MRPS28-209ENST00000522987 C5orf52A6NGY3 159 aa8.34□□□□□ -1.07
MRPS28-209ENST00000522987 SLC25A34Q6PIV7 304 aa8.34□□□□□ -1.07
MRPS28-209ENST00000522987 CBY1Q9Y3M2 126 aa8.34□□□□□ -1.07
MRPS28-209ENST00000522987 ZNF815PA8K554 130 aa8.33□□□□□ -1.08
MRPS28-209ENST00000522987 SYS1-DBNDD2H3BUS1 97 aa8.33□□□□□ -1.08
MRPS28-209ENST00000522987 COLCA2A8K830 154 aa8.32□□□□□ -1.08
MRPS28-209ENST00000522987 ELOF1P60002 83 aaKnown RBP8.32□□□□□ -1.08
MRPS28-209ENST00000522987 SPANXDQ9BXN6 97 aa8.32□□□□□ -1.08
MRPS28-209ENST00000522987 TIMM17BO60830 172 aa8.3□□□□□ -1.08
MRPS28-209ENST00000522987 SLC7A5P1Q8MH63 180 aa8.3□□□□□ -1.08
MRPS28-209ENST00000522987 PRO1933Q9H354 126 aa8.3□□□□□ -1.08
MRPS28-209ENST00000522987 TEX49A0A1B0GTD5 131 aa8.27□□□□□ -1.09
MRPS28-209ENST00000522987 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
MRPS28-209ENST00000522987 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
MRPS28-209ENST00000522987 SMIM29Q86T20 159 aa8.27□□□□□ -1.09
MRPS28-209ENST00000522987 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
MRPS28-209ENST00000522987 M0R2T5 61 aa8.25□□□□□ -1.09
MRPS28-209ENST00000522987 CFC1BP0CG36 223 aa8.25□□□□□ -1.09
MRPS28-209ENST00000522987 AKR1D1P51857 326 aa8.25□□□□□ -1.09
MRPS28-209ENST00000522987 KRTAP10-6P60371 365 aaPredicted RBP8.25□□□□□ -1.09
MRPS28-209ENST00000522987 CD164Q04900 197 aa8.25□□□□□ -1.09
MRPS28-209ENST00000522987 A6NDN8 102 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST1H2BKO60814 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST1H2BJP06899 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 LORP23490 312 aaPredicted RBP8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST1H2BOP23527 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST1H2BBP33778 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST1H2BDP58876 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST1H2BCP62807 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST2H2BEQ16778 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.24□□□□□ -1.09
MRPS28-209ENST00000522987 SCGB1D4Q6XE38 83 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST1H2BHQ93079 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST1H2BNQ99877 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 HIST1H2BMQ99879 126 aa8.24□□□□□ -1.09
MRPS28-209ENST00000522987 C3orf79P0CE67 100 aa8.23□□□□□ -1.09
MRPS28-209ENST00000522987 PET117Q6UWS5 81 aa8.23□□□□□ -1.09
MRPS28-209ENST00000522987 COX6B2Q6YFQ2 88 aa8.23□□□□□ -1.09
MRPS28-209ENST00000522987 KRTDAPP60985 99 aa8.22□□□□□ -1.09
MRPS28-209ENST00000522987 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.1
MRPS28-209ENST00000522987 A0A1B0GWB2 263 aa8.2□□□□□ -1.1
MRPS28-209ENST00000522987 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
MRPS28-209ENST00000522987 ATOH7Q8N100 152 aa8.2□□□□□ -1.1
MRPS28-209ENST00000522987 IGLV5-48A0A075B6I7 105 aa8.19□□□□□ -1.1
MRPS28-209ENST00000522987 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
MRPS28-209ENST00000522987 TRBV7-6A0A0J9YX20 115 aa8.18□□□□□ -1.1
MRPS28-209ENST00000522987 Q5XG85 94 aa8.18□□□□□ -1.1
MRPS28-209ENST00000522987 PCP2Q8IVA1 136 aa8.16□□□□□ -1.1
MRPS28-209ENST00000522987 SMIM11BQ8TCY0 68 aa8.16□□□□□ -1.1
MRPS28-209ENST00000522987 FLGP20930 4061 aaPredicted RBP8.14□□□□□ -1.11
MRPS28-209ENST00000522987 IFITM1P13164 125 aa8.14□□□□□ -1.11
MRPS28-209ENST00000522987 S100A1P23297 94 aa8.14□□□□□ -1.11
MRPS28-209ENST00000522987 TCL1BO95988 128 aa8.13□□□□□ -1.11
MRPS28-209ENST00000522987 Q6Q795 121 aa8.13□□□□□ -1.11
MRPS28-209ENST00000522987 COPS9Q8WXC6 57 aa8.12□□□□□ -1.11
MRPS28-209ENST00000522987 F8WEM9 126 aa8.11□□□□□ -1.11
MRPS28-209ENST00000522987 C20orf202A1L168 122 aa8.1□□□□□ -1.11
MRPS28-209ENST00000522987 NHP2Q9NX24 153 aaKnown RBP8.1□□□□□ -1.11
MRPS28-209ENST00000522987 TRAV13-2A0A0B4J235 113 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms