RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 GHRHP01286 108 aa16.62■□□□□ 0.25
COL13A1-213ENST00000520267 KRTAP7-1Q8IUC3 87 aa16.62■□□□□ 0.25
COL13A1-213ENST00000520267 IGLV5-37A0A075B6J1 123 aa16.6■□□□□ 0.25
COL13A1-213ENST00000520267 RPL37AP8A6NKH3 93 aa16.6■□□□□ 0.25
COL13A1-213ENST00000520267 HIST1H4AP62805 103 aaKnown RBP16.59■□□□□ 0.25
COL13A1-213ENST00000520267 A0A087WVE0 104 aa16.59■□□□□ 0.25
COL13A1-213ENST00000520267 UBL5Q9BZL1 73 aa16.58■□□□□ 0.25
COL13A1-213ENST00000520267 APLNQ9ULZ1 77 aa16.58■□□□□ 0.25
COL13A1-213ENST00000520267 STAB2Q8WWQ8 2551 aa16.58■□□□□ 0.25
COL13A1-213ENST00000520267 PDE6GP18545 87 aa16.57■□□□□ 0.24
COL13A1-213ENST00000520267 LYSTQ99698 3801 aa16.57■□□□□ 0.24
COL13A1-213ENST00000520267 TRBV7-4A0A0J9YYF1 115 aa16.57■□□□□ 0.24
COL13A1-213ENST00000520267 IGLV1-50A0A075B6I6 118 aa16.56■□□□□ 0.24
COL13A1-213ENST00000520267 LOC107984640A0A0U1RRK4 108 aa16.56■□□□□ 0.24
COL13A1-213ENST00000520267 B9D2Q9BPU9 175 aa16.55■□□□□ 0.24
COL13A1-213ENST00000520267 UBE2DNLQ8IWF7 75 aa16.54■□□□□ 0.24
COL13A1-213ENST00000520267 FAM19A5Q7Z5A7 132 aaPredicted RBP16.54■□□□□ 0.24
COL13A1-213ENST00000520267 ATP5EP2Q5VTU8 51 aa16.53■□□□□ 0.24
COL13A1-213ENST00000520267 DNAH10Q8IVF4 4471 aa16.53■□□□□ 0.24
COL13A1-213ENST00000520267 KRTAP4-16G5E9R7 235 aaPredicted RBP16.52■□□□□ 0.23
COL13A1-213ENST00000520267 PRYO14603 147 aa16.52■□□□□ 0.23
COL13A1-213ENST00000520267 SPRR1AP35321 89 aa16.5■□□□□ 0.23
COL13A1-213ENST00000520267 DYNC2H1Q8NCM8 4307 aaKnown RBP16.5■□□□□ 0.23
COL13A1-213ENST00000520267 Q6ZRX8 168 aa16.49■□□□□ 0.23
COL13A1-213ENST00000520267 MRPL55Q7Z7F7 128 aaKnown RBP16.49■□□□□ 0.23
COL13A1-213ENST00000520267 DEFB105AQ8NG35 78 aa16.48■□□□□ 0.23
COL13A1-213ENST00000520267 Q6ZVQ6 151 aa16.48■□□□□ 0.23
COL13A1-213ENST00000520267 Q9BRP9 147 aa16.48■□□□□ 0.23
COL13A1-213ENST00000520267 ATOX1O00244 68 aa16.47■□□□□ 0.23
COL13A1-213ENST00000520267 PSCAO43653 123 aa16.47■□□□□ 0.23
COL13A1-213ENST00000520267 FAM19A1Q7Z5A9 133 aa16.47■□□□□ 0.23
COL13A1-213ENST00000520267 ETDCA0A1B0GVM5 59 aa16.46■□□□□ 0.23
COL13A1-213ENST00000520267 Q8N377 158 aa16.46■□□□□ 0.23
COL13A1-213ENST00000520267 DHRS4-AS1Q9P1J3 65 aa16.45■□□□□ 0.22
COL13A1-213ENST00000520267 LINC01547P58512 204 aaPredicted RBP16.44■□□□□ 0.22
COL13A1-213ENST00000520267 C3orf22Q8N5N4 141 aa16.43■□□□□ 0.22
COL13A1-213ENST00000520267 A0A096LNI7 61 aa16.42■□□□□ 0.22
COL13A1-213ENST00000520267 CNBPP62633 177 aaKnown RBP16.42■□□□□ 0.22
COL13A1-213ENST00000520267 HAMPP81172 84 aa16.4■□□□□ 0.22
COL13A1-213ENST00000520267 CSMD3Q7Z407 3707 aa16.39■□□□□ 0.21
COL13A1-213ENST00000520267 UQCRQO14949 82 aa16.39■□□□□ 0.21
COL13A1-213ENST00000520267 COX7CP15954 63 aa16.39■□□□□ 0.21
COL13A1-213ENST00000520267 IGKV2-24A0A0C4DH68 120 aa16.38■□□□□ 0.21
COL13A1-213ENST00000520267 C16orf90A8MZG2 172 aa16.38■□□□□ 0.21
COL13A1-213ENST00000520267 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.38■□□□□ 0.21
COL13A1-213ENST00000520267 ST20-AS1Q8NBB2 130 aa16.38■□□□□ 0.21
COL13A1-213ENST00000520267 DNAH7Q8WXX0 4024 aa16.37■□□□□ 0.21
COL13A1-213ENST00000520267 ERC2-IT1O76042 136 aa16.35■□□□□ 0.21
COL13A1-213ENST00000520267 REG3GQ6UW15 175 aa16.35■□□□□ 0.21
COL13A1-213ENST00000520267 A0A1W2PNN7 141 aa16.35■□□□□ 0.21
COL13A1-213ENST00000520267 C9orf153Q5TBE3 101 aa16.35■□□□□ 0.21
COL13A1-213ENST00000520267 PLECQ15149 4684 aaKnown RBP16.34■□□□□ 0.21
COL13A1-213ENST00000520267 IGLV5-48A0A075B6I7 105 aa16.33■□□□□ 0.2
COL13A1-213ENST00000520267 UBE2BP63146 152 aa16.31■□□□□ 0.2
COL13A1-213ENST00000520267 NUPR2A6NF83 97 aa16.31■□□□□ 0.2
COL13A1-213ENST00000520267 CXCL6P80162 114 aa16.31■□□□□ 0.2
COL13A1-213ENST00000520267 C14orf177Q52M58 125 aa16.31■□□□□ 0.2
COL13A1-213ENST00000520267 NBDYA0A0U1RRE5 68 aa16.29■□□□□ 0.2
COL13A1-213ENST00000520267 SERP2Q8N6R1 65 aa16.29■□□□□ 0.2
COL13A1-213ENST00000520267 TENM2Q9NT68 2774 aa16.29■□□□□ 0.2
COL13A1-213ENST00000520267 SCXQ7RTU7 201 aa16.28■□□□□ 0.2
COL13A1-213ENST00000520267 LRCOL1A6NCL2 159 aa16.26■□□□□ 0.19
COL13A1-213ENST00000520267 CHTF8P0CG12 524 aa16.26■□□□□ 0.19
COL13A1-213ENST00000520267 TNP2Q05952 138 aa16.26■□□□□ 0.19
COL13A1-213ENST00000520267 C3orf84H3BNL1 204 aa16.23■□□□□ 0.19
COL13A1-213ENST00000520267 CRYGAP11844 174 aa16.22■□□□□ 0.19
COL13A1-213ENST00000520267 Q6ZRN7 208 aaPredicted RBP16.21■□□□□ 0.19
COL13A1-213ENST00000520267 PRLHP81277 87 aa16.2■□□□□ 0.18
COL13A1-213ENST00000520267 C9orf163Q8N9P6 203 aa16.2■□□□□ 0.18
COL13A1-213ENST00000520267 A0A1W2PNM2 257 aa16.19■□□□□ 0.18
COL13A1-213ENST00000520267 C1orf137Q5JT78 98 aa16.19■□□□□ 0.18
COL13A1-213ENST00000520267 NREPQ16612 68 aa16.19■□□□□ 0.18
COL13A1-213ENST00000520267 PHF5AQ7RTV0 110 aaKnown RBP16.19■□□□□ 0.18
COL13A1-213ENST00000520267 KRTAP11-1Q8IUC1 163 aa16.18■□□□□ 0.18
COL13A1-213ENST00000520267 SMIM29Q86T20 159 aa16.17■□□□□ 0.18
COL13A1-213ENST00000520267 PRKDCP78527 4128 aaKnown RBP16.17■□□□□ 0.18
COL13A1-213ENST00000520267 J3KT08 172 aa16.16■□□□□ 0.18
COL13A1-213ENST00000520267 CYSTM1Q9H1C7 97 aa16.16■□□□□ 0.18
COL13A1-213ENST00000520267 STARD9Q9P2P6 4700 aa16.16■□□□□ 0.18
COL13A1-213ENST00000520267 FUSP35637 526 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL13A1-213ENST00000520267 RPS28P62857 69 aaKnown RBP16.13■□□□□ 0.17
COL13A1-213ENST00000520267 VPS13DQ5THJ4 4388 aa16.13■□□□□ 0.17
COL13A1-213ENST00000520267 Q8NBF4 154 aa16.11■□□□□ 0.17
COL13A1-213ENST00000520267 HIGD2AQ9BW72 106 aa16.11■□□□□ 0.17
COL13A1-213ENST00000520267 Q8N9L7 120 aa16.11■□□□□ 0.17
COL13A1-213ENST00000520267 BCE1O60756 84 aa16.09■□□□□ 0.17
COL13A1-213ENST00000520267 PANO1I0J062 215 aa16.08■□□□□ 0.17
COL13A1-213ENST00000520267 A0A1B0GW54 56 aa16.08■□□□□ 0.16
COL13A1-213ENST00000520267 BPY2O14599 106 aa16.07■□□□□ 0.16
COL13A1-213ENST00000520267 C5orf47Q569G3 176 aa16.07■□□□□ 0.16
COL13A1-213ENST00000520267 LINC00476Q8WZB0 136 aa16.07■□□□□ 0.16
COL13A1-213ENST00000520267 SPRR4Q96PI1 79 aa16.06■□□□□ 0.16
COL13A1-213ENST00000520267 IGKV4-1P06312 121 aa16.06■□□□□ 0.16
COL13A1-213ENST00000520267 PKIGQ9Y2B9 76 aa16.05■□□□□ 0.16
COL13A1-213ENST00000520267 A0A0G2JQZ4 141 aa16.03■□□□□ 0.16
COL13A1-213ENST00000520267 EPM2AB3EWF7 344 aa16.03■□□□□ 0.16
COL13A1-213ENST00000520267 F8WEM9 126 aa16.03■□□□□ 0.16
COL13A1-213ENST00000520267 TRAV7A0A075B6U4 112 aa16.03■□□□□ 0.16
COL13A1-213ENST00000520267 LINC00474Q9P2X8 69 aa16.02■□□□□ 0.15
COL13A1-213ENST00000520267 IGFL1Q6UW32 110 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms