RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 CFTRP13569 1480 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 TMEM131LA2VDJ0 1609 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 TSTD3H0UI37 97 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 SMR3BP02814 79 aaPredicted RBP-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 TNP1P09430 55 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 IGLC6P0CF74 106 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 SMCO1Q147U7 214 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 COX6B2Q6YFQ2 88 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 SERP2Q8N6R1 65 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 WFDC9Q8NEX5 89 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 TCEAL4Q96EI5 215 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 CHMP6Q96FZ7 201 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 PPP3R2Q96LZ3 170 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 SMIM3Q9BZL3 60 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 PRO3102Q9H379 93 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 GSKIPQ9P0R6 139 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 HSPB11Q9Y547 144 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 CFAP43Q8NDM7 1665 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 UBR1Q8IWV7 1749 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 TLN1Q9Y490 2541 aaKnown RBP-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 ADGRG4Q8IZF6 3080 aa-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 LRRC7Q96NW7 1537 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 MGAQ8IWI9 3026 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 ZC3H13Q5T200 1668 aaKnown RBP-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 ITSN2Q9NZM3 1697 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 MMP24-AS1A0A0U1RRL7 71 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 A0A1B0GX51 115 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 MIF4GDA9UHW6 222 aaKnown RBP-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 M0R2Z0 102 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 C3orf79P0CE67 100 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 S100PP25815 95 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 LINC00158P58513 81 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 GNG11P61952 73 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 SMIM21Q3B7S5 101 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 ANP32BQ92688 251 aaKnown RBP-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 LINC00846Q9NV44 126 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 ATMQ13315 3056 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 FHAD1B1AJZ9 1412 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 ATP7BP35670 1465 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 GRIN2AQ12879 1464 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 FYCO1Q9BQS8 1478 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 MRC2Q9UBG0 1479 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 DNAH17Q9UFH2 4485 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 SAMD9Q5K651 1589 aa-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 THOC2Q8NI27 1593 aaKnown RBP-0.74□□□□□ -2.53
RNU4-49P-201ENST00000516080 WIZO95785 1651 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 FREM2Q5SZK8 3169 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 TMEM218A2RU14 115 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 C7orf77A4D0Y5 90 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 LINC01546A6NGU7 62 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 CRYM-AS1A6NIL9 109 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 E5RI56 91 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 K7EP13 123 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 LINC00694P0DN24 101 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 COPZ1P61923 177 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 Q0VG73 95 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 PSMG4Q5JS54 123 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 COMMD6Q7Z4G1 85 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 C8orf59Q8N0T1 100 aaPredicted RBP-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 C1orf54Q8WWF1 131 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 PFDN5Q99471 154 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 SPANXA1Q9NS26 97 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 CCDC167Q9P0B6 97 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 PRO1854Q9UHT4 67 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 CSMD2Q7Z408 3487 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 DNAH5Q8TE73 4624 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 MYO5CQ9NQX4 1742 aa-0.75□□□□□ -2.53
RNU4-49P-201ENST00000516080 DNAH10Q8IVF4 4471 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 DNAH8Q96JB1 4490 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 DMXL2Q8TDJ6 3036 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 NAP1L6A6NFF2 107 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 COX7BP24311 80 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 G0S2P27469 103 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 HSD52Q0P140 79 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 MORN2Q502X0 79 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 TSTD1Q8NFU3 115 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 LZICQ8WZA0 190 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 TRGV9Q99603 122 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 SPANXDQ9BXN6 97 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 RERGLQ9H628 205 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 GINS2Q9Y248 185 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 TRRAPQ9Y4A5 3859 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 ABCC2Q92887 1545 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 NRKQ7Z2Y5 1582 aa-0.76□□□□□ -2.53
RNU4-49P-201ENST00000516080 SMARCA2P51531 1590 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 KIAA0586Q9BVV6 1533 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 NAIPQ13075 1403 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 FAM25AB3EWG3 89 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 FAM25CB3EWG5 89 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 FAM25GB3EWG6 89 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 TMEM262E9PQX1 116 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 DEFB4AO15263 64 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 APOC2P02655 101 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 IFI6P09912 130 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 IAPPP10997 89 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 CATR1Q13166 79 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 SMIM15Q7Z3B0 74 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 AIF1LQ9BQI0 150 aa-0.77□□□□□ -2.53
RNU4-49P-201ENST00000516080 SERP1Q9Y6X1 66 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms