RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 HTN3P15516 51 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 LELP1Q5T871 98 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 LYRM7Q5U5X0 104 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 SH2D6Q7Z4S9 175 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 SMCR5Q8TEV8 140 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 TM2D3Q9BRN9 247 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 SPANXCQ9NY87 97 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 NBEAL2Q6ZNJ1 2754 aa3.96□□□□□ -1.78
NPHP3-211ENST00000515289 COL6A5A8TX70 2615 aa3.95□□□□□ -1.78
NPHP3-211ENST00000515289 A0A1W2PPM0 123 aa3.95□□□□□ -1.78
NPHP3-211ENST00000515289 H3BUT2 72 aa3.95□□□□□ -1.78
NPHP3-211ENST00000515289 HIST1H4AP62805 103 aaKnown RBP3.95□□□□□ -1.78
NPHP3-211ENST00000515289 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
NPHP3-211ENST00000515289 RAB37Q96AX2 223 aa3.95□□□□□ -1.78
NPHP3-211ENST00000515289 HUWE1Q7Z6Z7 4374 aaKnown RBP3.94□□□□□ -1.78
NPHP3-211ENST00000515289 IGKV3OR2-268A0A0C4DH90 116 aa3.94□□□□□ -1.78
NPHP3-211ENST00000515289 TMEM262E9PQX1 116 aa3.94□□□□□ -1.78
NPHP3-211ENST00000515289 K7EP34 96 aa3.94□□□□□ -1.78
NPHP3-211ENST00000515289 MIAQ16674 131 aa3.94□□□□□ -1.78
NPHP3-211ENST00000515289 LYPD5Q6UWN5 251 aa3.94□□□□□ -1.78
NPHP3-211ENST00000515289 LCA10Q71F78 164 aa3.94□□□□□ -1.78
NPHP3-211ENST00000515289 MUSTN1Q8IVN3 82 aa3.94□□□□□ -1.78
NPHP3-211ENST00000515289 XCL1P47992 114 aa3.93□□□□□ -1.78
NPHP3-211ENST00000515289 CLPSL2Q6UWE3 100 aa3.93□□□□□ -1.78
NPHP3-211ENST00000515289 C5orf38Q86SI9 138 aa3.93□□□□□ -1.78
NPHP3-211ENST00000515289 LINC00269Q8N2A0 174 aa3.93□□□□□ -1.78
NPHP3-211ENST00000515289 COX7B2Q8TF08 81 aa3.93□□□□□ -1.78
NPHP3-211ENST00000515289 TENM3Q9P273 2699 aa3.93□□□□□ -1.78
NPHP3-211ENST00000515289 ZNF73O43830 326 aaPredicted RBP3.92□□□□□ -1.78
NPHP3-211ENST00000515289 IGHV3-33P01772 117 aa3.92□□□□□ -1.78
NPHP3-211ENST00000515289 DNAH10OSP0CZ25 163 aa3.92□□□□□ -1.78
NPHP3-211ENST00000515289 FABP2P12104 132 aa3.92□□□□□ -1.78
NPHP3-211ENST00000515289 IFITM1P13164 125 aa3.92□□□□□ -1.78
NPHP3-211ENST00000515289 SS18Q15532 418 aa3.92□□□□□ -1.78
NPHP3-211ENST00000515289 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
NPHP3-211ENST00000515289 SOSTDC1Q6X4U4 206 aa3.92□□□□□ -1.78
NPHP3-211ENST00000515289 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
NPHP3-211ENST00000515289 SPCS1Q9Y6A9 102 aa3.92□□□□□ -1.78
NPHP3-211ENST00000515289 NOTCH1P46531 2555 aa3.91□□□□□ -1.78
NPHP3-211ENST00000515289 DEFB131BA0A096LNP1 70 aa3.91□□□□□ -1.78
NPHP3-211ENST00000515289 ANGP03950 147 aaKnown RBP3.91□□□□□ -1.78
NPHP3-211ENST00000515289 ESRGQ1W209 222 aa3.91□□□□□ -1.78
NPHP3-211ENST00000515289 KRTAP26-1Q6PEX3 210 aa3.91□□□□□ -1.78
NPHP3-211ENST00000515289 ENHOQ6UWT2 76 aa3.91□□□□□ -1.78
NPHP3-211ENST00000515289 WFDC10BQ8IUB3 73 aa3.91□□□□□ -1.78
NPHP3-211ENST00000515289 LINC00308Q8TCZ7 52 aa3.91□□□□□ -1.78
NPHP3-211ENST00000515289 LAMTOR3Q9UHA4 124 aa3.91□□□□□ -1.78
NPHP3-211ENST00000515289 PKD1L1Q8TDX9 2849 aa3.9□□□□□ -1.78
NPHP3-211ENST00000515289 MGAM2Q2M2H8 2515 aa3.9□□□□□ -1.78
NPHP3-211ENST00000515289 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.9□□□□□ -1.79
NPHP3-211ENST00000515289 TRAV10A0A0B4J240 114 aa3.9□□□□□ -1.79
NPHP3-211ENST00000515289 H3BPC8 53 aa3.9□□□□□ -1.79
NPHP3-211ENST00000515289 GTF2H5Q6ZYL4 71 aa3.9□□□□□ -1.79
NPHP3-211ENST00000515289 Q8IZM0 81 aa3.9□□□□□ -1.79
NPHP3-211ENST00000515289 TOMM7Q9P0U1 55 aa3.9□□□□□ -1.79
NPHP3-211ENST00000515289 PRO1854Q9UHT4 67 aa3.9□□□□□ -1.79
NPHP3-211ENST00000515289 DNAH9Q9NYC9 4486 aa3.9□□□□□ -1.79
NPHP3-211ENST00000515289 IGLV10-54A0A075B6I4 117 aa3.89□□□□□ -1.79
NPHP3-211ENST00000515289 IBA57-AS1B1ANH7 110 aa3.89□□□□□ -1.79
NPHP3-211ENST00000515289 NPC2P61916 151 aa3.89□□□□□ -1.79
NPHP3-211ENST00000515289 CIRBPQ14011 172 aaKnown RBP3.89□□□□□ -1.79
NPHP3-211ENST00000515289 MEIG1Q5JSS6 88 aa3.89□□□□□ -1.79
NPHP3-211ENST00000515289 PRO0461Q9UI25 63 aa3.89□□□□□ -1.79
NPHP3-211ENST00000515289 DEFB121Q5J5C9 76 aa3.88□□□□□ -1.79
NPHP3-211ENST00000515289 LINC01556Q5JQF7 62 aa3.88□□□□□ -1.79
NPHP3-211ENST00000515289 SFTA2Q6UW10 78 aa3.88□□□□□ -1.79
NPHP3-211ENST00000515289 C2orf82Q6UX34 121 aa3.88□□□□□ -1.79
NPHP3-211ENST00000515289 C15orf53Q8NAA6 179 aa3.88□□□□□ -1.79
NPHP3-211ENST00000515289 ERG28Q9UKR5 140 aa3.88□□□□□ -1.79
NPHP3-211ENST00000515289 R4GN34 69 aa3.88□□□□□ -1.79
NPHP3-211ENST00000515289 NBEAL1Q6ZS30 2694 aa3.88□□□□□ -1.79
NPHP3-211ENST00000515289 TRBV30A0A0K0K1B3 111 aa3.87□□□□□ -1.79
NPHP3-211ENST00000515289 CCL18P55774 89 aa3.87□□□□□ -1.79
NPHP3-211ENST00000515289 MOBPQ13875 183 aa3.87□□□□□ -1.79
NPHP3-211ENST00000515289 LINC01554Q52M75 96 aa3.87□□□□□ -1.79
NPHP3-211ENST00000515289 DNHD1Q96M86 4753 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 IGKV2-28A0A075B6P5 120 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 LOC107984156A0A0G2JMH3 177 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 H3BMG7 143 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 PSCAO43653 123 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 TCL1BO95988 128 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 IGKV2D-28P01615 120 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 CRPP02741 224 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 LINC00158P58513 81 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
NPHP3-211ENST00000515289 SPAG11BQ08648 103 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 KRTAP11-1Q8IUC1 163 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 ARL17AQ8IVW1 177 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 C1orf64Q8NEQ6 169 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 COPS9Q8WXC6 57 aa3.86□□□□□ -1.79
NPHP3-211ENST00000515289 TRBV20-1A0A075B6N2 111 aa3.85□□□□□ -1.79
NPHP3-211ENST00000515289 GVQW2A0A096LPI5 108 aaPredicted RBP3.85□□□□□ -1.79
NPHP3-211ENST00000515289 H7C2G1 150 aa3.85□□□□□ -1.79
NPHP3-211ENST00000515289 WFDC2Q14508 124 aa3.85□□□□□ -1.79
NPHP3-211ENST00000515289 DYNC2H1Q8NCM8 4307 aaKnown RBP3.85□□□□□ -1.79
NPHP3-211ENST00000515289 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
NPHP3-211ENST00000515289 CKS1BP61024 79 aa3.84□□□□□ -1.79
NPHP3-211ENST00000515289 C9orf116Q5BN46 136 aaPredicted RBP3.84□□□□□ -1.79
NPHP3-211ENST00000515289 UNQ6190/PRO20217Q6UXQ8 127 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 409 ms