RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 MT4P47944 62 aa0.12□□□□□ -2.39
PHF3-211ENST00000514822 GNGT1P63211 74 aa0.12□□□□□ -2.39
PHF3-211ENST00000514822 COL5A1-AS1Q5SY13 56 aa0.12□□□□□ -2.39
PHF3-211ENST00000514822 CRIPTQ9P021 101 aa0.12□□□□□ -2.39
PHF3-211ENST00000514822 HUWE1Q7Z6Z7 4374 aaKnown RBP0.12□□□□□ -2.39
PHF3-211ENST00000514822 DYNC1H1Q14204 4646 aaKnown RBP0.12□□□□□ -2.39
PHF3-211ENST00000514822 URB1O60287 2271 aaKnown RBP0.12□□□□□ -2.39
PHF3-211ENST00000514822 PAPPAQ13219 1627 aa0.12□□□□□ -2.39
PHF3-211ENST00000514822 TULP4Q9NRJ4 1543 aa0.12□□□□□ -2.39
PHF3-211ENST00000514822 VPS8Q8N3P4 1428 aa0.12□□□□□ -2.39
PHF3-211ENST00000514822 PRKDCP78527 4128 aaKnown RBP0.11□□□□□ -2.39
PHF3-211ENST00000514822 FYCO1Q9BQS8 1478 aa0.11□□□□□ -2.39
PHF3-211ENST00000514822 RAPGEF2Q9Y4G8 1499 aa0.11□□□□□ -2.39
PHF3-211ENST00000514822 WNK2Q9Y3S1 2297 aa0.11□□□□□ -2.39
PHF3-211ENST00000514822 H0Y9P7 68 aa0.11□□□□□ -2.39
PHF3-211ENST00000514822 K7EQZ3 153 aa0.11□□□□□ -2.39
PHF3-211ENST00000514822 GYPAP02724 150 aa0.11□□□□□ -2.39
PHF3-211ENST00000514822 MT-ATP8P03928 68 aa0.11□□□□□ -2.39
PHF3-211ENST00000514822 CSPG4Q6UVK1 2322 aa0.11□□□□□ -2.39
PHF3-211ENST00000514822 A0A0G2JMZ2 1700 aa0.1□□□□□ -2.39
PHF3-211ENST00000514822 LAMC1P11047 1609 aa0.1□□□□□ -2.39
PHF3-211ENST00000514822 PKIAP61925 76 aa0.1□□□□□ -2.39
PHF3-211ENST00000514822 LYSTQ99698 3801 aa0.1□□□□□ -2.39
PHF3-211ENST00000514822 IQSEC2Q5JU85 1478 aa0.1□□□□□ -2.39
PHF3-211ENST00000514822 APC2O95996 2303 aa0.09□□□□□ -2.39
PHF3-211ENST00000514822 ANKRD36BQ8N2N9 1353 aa0.09□□□□□ -2.39
PHF3-211ENST00000514822 PPRC1Q5VV67 1664 aaKnown RBP0.09□□□□□ -2.39
PHF3-211ENST00000514822 NBASA2RRP1 2371 aa0.09□□□□□ -2.39
PHF3-211ENST00000514822 A0A087WVE0 104 aa0.09□□□□□ -2.4
PHF3-211ENST00000514822 TRBV7-7A0A0K0K1E9 115 aa0.09□□□□□ -2.4
PHF3-211ENST00000514822 FAUP35544 74 aaKnown RBP0.09□□□□□ -2.4
PHF3-211ENST00000514822 C6orf201Q7Z4U5 140 aa0.09□□□□□ -2.4
PHF3-211ENST00000514822 LCN9Q8WX39 176 aa0.09□□□□□ -2.4
PHF3-211ENST00000514822 ARHGEF5Q12774 1597 aa0.09□□□□□ -2.4
PHF3-211ENST00000514822 CICQ96RK0 1608 aaPredicted RBP0.09□□□□□ -2.4
PHF3-211ENST00000514822 EDC4Q6P2E9 1401 aaKnown RBP0.08□□□□□ -2.4
PHF3-211ENST00000514822 D6R8Y8 96 aa0.08□□□□□ -2.4
PHF3-211ENST00000514822 I3L3M4 83 aa0.08□□□□□ -2.4
PHF3-211ENST00000514822 ETDBQ3ZM63 59 aa0.08□□□□□ -2.4
PHF3-211ENST00000514822 NCMAPQ5T1S8 102 aa0.08□□□□□ -2.4
PHF3-211ENST00000514822 MUSTN1Q8IVN3 82 aa0.08□□□□□ -2.4
PHF3-211ENST00000514822 DEFB105AQ8NG35 78 aa0.08□□□□□ -2.4
PHF3-211ENST00000514822 TOP2BQ02880 1626 aa0.08□□□□□ -2.4
PHF3-211ENST00000514822 PLEKHH2Q8IVE3 1493 aa0.08□□□□□ -2.4
PHF3-211ENST00000514822 EPRSP07814 1512 aaKnown RBP0.08□□□□□ -2.4
PHF3-211ENST00000514822 LPAP08519 4548 aa0.07□□□□□ -2.4
PHF3-211ENST00000514822 CCL22O00626 93 aa0.07□□□□□ -2.4
PHF3-211ENST00000514822 LEPROTL1O95214 131 aa0.07□□□□□ -2.4
PHF3-211ENST00000514822 DEFB107AQ8IZN7 70 aa0.07□□□□□ -2.4
PHF3-211ENST00000514822 BTAF1O14981 1849 aa0.07□□□□□ -2.4
PHF3-211ENST00000514822 PDCD11Q14690 1871 aaKnown RBP0.07□□□□□ -2.4
PHF3-211ENST00000514822 FAT2Q9NYQ8 4349 aa0.07□□□□□ -2.4
PHF3-211ENST00000514822 DNAH1Q9P2D7 4330 aa0.06□□□□□ -2.4
PHF3-211ENST00000514822 DNAJC13O75165 2243 aa0.06□□□□□ -2.4
PHF3-211ENST00000514822 NLRP1Q9C000 1473 aa0.06□□□□□ -2.4
PHF3-211ENST00000514822 CPSF4LA6NMK7 179 aaKnown RBP0.06□□□□□ -2.4
PHF3-211ENST00000514822 FXYD6Q9H0Q3 95 aa0.06□□□□□ -2.4
PHF3-211ENST00000514822 Q9H521 79 aa0.06□□□□□ -2.4
PHF3-211ENST00000514822 PSENENQ9NZ42 101 aa0.06□□□□□ -2.4
PHF3-211ENST00000514822 TOPAZ1Q8N9V7 1692 aa0.05□□□□□ -2.4
PHF3-211ENST00000514822 XRN1Q8IZH2 1706 aaKnown RBP0.05□□□□□ -2.4
PHF3-211ENST00000514822 LOC730098B7Z3J9 87 aa0.05□□□□□ -2.4
PHF3-211ENST00000514822 PYY3Q5JQD4 70 aa0.05□□□□□ -2.4
PHF3-211ENST00000514822 CLIP1P30622 1438 aa0.04□□□□□ -2.4
PHF3-211ENST00000514822 DYNC2H1Q8NCM8 4307 aaKnown RBP0.04□□□□□ -2.4
PHF3-211ENST00000514822 SPTY2D1-AS1A0A0U1RR47 76 aa0.04□□□□□ -2.4
PHF3-211ENST00000514822 SPRR2EP22531 72 aa0.04□□□□□ -2.4
PHF3-211ENST00000514822 SPRR2DP22532 72 aa0.04□□□□□ -2.4
PHF3-211ENST00000514822 SPRR2BP35325 72 aa0.04□□□□□ -2.4
PHF3-211ENST00000514822 SPRR2AP35326 72 aa0.04□□□□□ -2.4
PHF3-211ENST00000514822 PEA15Q15121 130 aa0.04□□□□□ -2.4
PHF3-211ENST00000514822 COL4A6Q14031 1691 aa0.04□□□□□ -2.4
PHF3-211ENST00000514822 ABCA3Q99758 1704 aa0.04□□□□□ -2.4
PHF3-211ENST00000514822 FANCAO15360 1455 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 CUX1P39880 1505 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 CC2D2AQ9P2K1 1620 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 F8WEM9 126 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 RPL38P63173 70 aaKnown RBP0.03□□□□□ -2.4
PHF3-211ENST00000514822 NMSQ5H8A3 153 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 SNHG12Q9BXW3 62 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 RABAC1Q9UI14 185 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 APLNQ9ULZ1 77 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 V9GYS6 101 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 SACSQ9NZJ4 4579 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 CCNB3Q8WWL7 1395 aa0.03□□□□□ -2.4
PHF3-211ENST00000514822 ATP10BO94823 1461 aa0.03□□□□□ -2.41
PHF3-211ENST00000514822 DNAH9Q9NYC9 4486 aa0.03□□□□□ -2.41
PHF3-211ENST00000514822 CHD1O14646 1710 aa0.02□□□□□ -2.41
PHF3-211ENST00000514822 NUP188Q5SRE5 1749 aa0.02□□□□□ -2.41
PHF3-211ENST00000514822 PVALEFA0A1B0GWK0 134 aa0.02□□□□□ -2.41
PHF3-211ENST00000514822 CYB5AP00167 134 aa0.02□□□□□ -2.41
PHF3-211ENST00000514822 HMGN2P05204 90 aaKnown RBP0.02□□□□□ -2.41
PHF3-211ENST00000514822 FAT1Q14517 4588 aa0.02□□□□□ -2.41
PHF3-211ENST00000514822 TROQ12816 1431 aaPredicted RBP0.02□□□□□ -2.41
PHF3-211ENST00000514822 ANK3Q12955 4377 aaKnown RBP0.02□□□□□ -2.41
PHF3-211ENST00000514822 ABCC10Q5T3U5 1492 aa0.02□□□□□ -2.41
PHF3-211ENST00000514822 KIAA0556O60303 1618 aa0.02□□□□□ -2.41
PHF3-211ENST00000514822 LRRC37AA6NMS7 1700 aa0.01□□□□□ -2.41
PHF3-211ENST00000514822 IGLC3P0DOY3 106 aa0.01□□□□□ -2.41
PHF3-211ENST00000514822 PLGLAQ15195 96 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms