RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 J3QQQ9 107 aa6.82□□□□□ -1.32
SNHG4-208ENST00000514110 LEPROTL1O95214 131 aa6.82□□□□□ -1.32
SNHG4-208ENST00000514110 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
SNHG4-208ENST00000514110 Q6ZRX8 168 aa6.82□□□□□ -1.32
SNHG4-208ENST00000514110 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
SNHG4-208ENST00000514110 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
SNHG4-208ENST00000514110 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
SNHG4-208ENST00000514110 SERF1AO75920 110 aa6.81□□□□□ -1.32
SNHG4-208ENST00000514110 TRGC2P03986 189 aa6.81□□□□□ -1.32
SNHG4-208ENST00000514110 IGLV6-57P01721 117 aa6.8□□□□□ -1.32
SNHG4-208ENST00000514110 PLNP26678 52 aa6.8□□□□□ -1.32
SNHG4-208ENST00000514110 PMCHL2Q9BQD1 86 aa6.8□□□□□ -1.32
SNHG4-208ENST00000514110 DPM2O94777 84 aa6.79□□□□□ -1.32
SNHG4-208ENST00000514110 NDUFC2O95298 119 aa6.79□□□□□ -1.32
SNHG4-208ENST00000514110 NMUP48645 174 aa6.79□□□□□ -1.32
SNHG4-208ENST00000514110 SEC61GP60059 68 aa6.79□□□□□ -1.32
SNHG4-208ENST00000514110 SEC61BP60468 96 aaKnown RBP6.79□□□□□ -1.32
SNHG4-208ENST00000514110 VAMP3Q15836 100 aa6.79□□□□□ -1.32
SNHG4-208ENST00000514110 S100A7L2Q5SY68 101 aa6.79□□□□□ -1.32
SNHG4-208ENST00000514110 SOSTDC1Q6X4U4 206 aa6.79□□□□□ -1.32
SNHG4-208ENST00000514110 MIEN1Q9BRT3 115 aa6.79□□□□□ -1.32
SNHG4-208ENST00000514110 TRAV23DV6A0A075B6W5 121 aa6.78□□□□□ -1.32
SNHG4-208ENST00000514110 SLC25A20O43772 301 aa6.78□□□□□ -1.32
SNHG4-208ENST00000514110 FABP4P15090 132 aa6.78□□□□□ -1.32
SNHG4-208ENST00000514110 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
SNHG4-208ENST00000514110 HERVK_113P61574 105 aa6.78□□□□□ -1.32
SNHG4-208ENST00000514110 NPC2P61916 151 aa6.78□□□□□ -1.32
SNHG4-208ENST00000514110 IGKCP01834 107 aa6.77□□□□□ -1.33
SNHG4-208ENST00000514110 ADAMTSL4-AS1Q5T5F5 129 aa6.77□□□□□ -1.33
SNHG4-208ENST00000514110 HSPB8Q9UJY1 196 aa6.77□□□□□ -1.33
SNHG4-208ENST00000514110 ZNF73O43830 326 aaPredicted RBP6.76□□□□□ -1.33
SNHG4-208ENST00000514110 LINC01547P58512 204 aaPredicted RBP6.76□□□□□ -1.33
SNHG4-208ENST00000514110 JOSD1Q15040 202 aaPredicted RBP6.76□□□□□ -1.33
SNHG4-208ENST00000514110 C9orf153Q5TBE3 101 aa6.76□□□□□ -1.33
SNHG4-208ENST00000514110 ST20-AS1Q8NBB2 130 aa6.76□□□□□ -1.33
SNHG4-208ENST00000514110 A0A0J9YXY3 114 aa6.75□□□□□ -1.33
SNHG4-208ENST00000514110 XP32Q5T750 250 aa6.75□□□□□ -1.33
SNHG4-208ENST00000514110 E9PLD3 99 aa6.72□□□□□ -1.33
SNHG4-208ENST00000514110 C5orf47Q569G3 176 aa6.71□□□□□ -1.34
SNHG4-208ENST00000514110 LITAFQ99732 161 aa6.71□□□□□ -1.34
SNHG4-208ENST00000514110 COLCA2A8K830 154 aa6.69□□□□□ -1.34
SNHG4-208ENST00000514110 SPRR1BP22528 89 aa6.69□□□□□ -1.34
SNHG4-208ENST00000514110 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
SNHG4-208ENST00000514110 LCE2CQ5TA81 110 aa6.69□□□□□ -1.34
SNHG4-208ENST00000514110 HRCT1Q6UXD1 115 aa6.69□□□□□ -1.34
SNHG4-208ENST00000514110 LINC00308Q8TCZ7 52 aa6.69□□□□□ -1.34
SNHG4-208ENST00000514110 OR13C6PQ8NH95 151 aa6.68□□□□□ -1.34
SNHG4-208ENST00000514110 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
SNHG4-208ENST00000514110 SYS1-DBNDD2H3BUS1 97 aa6.67□□□□□ -1.34
SNHG4-208ENST00000514110 TIMM17BO60830 172 aa6.66□□□□□ -1.34
SNHG4-208ENST00000514110 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
SNHG4-208ENST00000514110 LIMD2Q9BT23 127 aa6.66□□□□□ -1.34
SNHG4-208ENST00000514110 DHRS4-AS1Q9P1J3 65 aa6.66□□□□□ -1.34
SNHG4-208ENST00000514110 C9orf92A6NGG3 77 aa6.65□□□□□ -1.34
SNHG4-208ENST00000514110 PCOTHQ58A44 107 aa6.65□□□□□ -1.34
SNHG4-208ENST00000514110 SLC25A34Q6PIV7 304 aa6.65□□□□□ -1.34
SNHG4-208ENST00000514110 SPANXDQ9BXN6 97 aa6.65□□□□□ -1.34
SNHG4-208ENST00000514110 LAMTOR3Q9UHA4 124 aa6.65□□□□□ -1.34
SNHG4-208ENST00000514110 COX7BP24311 80 aa6.64□□□□□ -1.35
SNHG4-208ENST00000514110 ELOF1P60002 83 aaKnown RBP6.64□□□□□ -1.35
SNHG4-208ENST00000514110 LINC01545Q5VT33 79 aa6.64□□□□□ -1.35
SNHG4-208ENST00000514110 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
SNHG4-208ENST00000514110 ZNF815PA8K554 130 aa6.63□□□□□ -1.35
SNHG4-208ENST00000514110 C6orf99Q4VX62 202 aa6.63□□□□□ -1.35
SNHG4-208ENST00000514110 IGLV8-61A0A075B6I0 122 aa6.62□□□□□ -1.35
SNHG4-208ENST00000514110 TAL2Q16559 108 aa6.62□□□□□ -1.35
SNHG4-208ENST00000514110 Q1RN00 199 aa6.62□□□□□ -1.35
SNHG4-208ENST00000514110 DEFB105AQ8NG35 78 aa6.62□□□□□ -1.35
SNHG4-208ENST00000514110 HIST1H2BKO60814 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST1H2BJP06899 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST1H2BOP23527 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST1H2BBP33778 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST1H2BDP58876 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST1H2BCP62807 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 MT1HP80294 61 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 CD164Q04900 197 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST2H2BEQ16778 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.61□□□□□ -1.35
SNHG4-208ENST00000514110 LINC00518Q8N0U6 118 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST1H2BHQ93079 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST1H2BNQ99877 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 HIST1H2BMQ99879 126 aa6.61□□□□□ -1.35
SNHG4-208ENST00000514110 H7C2G1 150 aa6.6□□□□□ -1.35
SNHG4-208ENST00000514110 TEX49A0A1B0GTD5 131 aa6.59□□□□□ -1.35
SNHG4-208ENST00000514110 SMIM29Q86T20 159 aa6.59□□□□□ -1.35
SNHG4-208ENST00000514110 PRO1933Q9H354 126 aa6.59□□□□□ -1.35
SNHG4-208ENST00000514110 TRBV7-6A0A0J9YX20 115 aa6.58□□□□□ -1.36
SNHG4-208ENST00000514110 C3orf79P0CE67 100 aa6.58□□□□□ -1.36
SNHG4-208ENST00000514110 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
SNHG4-208ENST00000514110 A0A0G2JQZ4 141 aa6.57□□□□□ -1.36
SNHG4-208ENST00000514110 C1orf195Q5TG92 126 aa6.56□□□□□ -1.36
SNHG4-208ENST00000514110 Q5XG85 94 aa6.56□□□□□ -1.36
SNHG4-208ENST00000514110 IGLV5-48A0A075B6I7 105 aa6.55□□□□□ -1.36
SNHG4-208ENST00000514110 A0A1B0GWB2 263 aa6.55□□□□□ -1.36
SNHG4-208ENST00000514110 AKR1D1P51857 326 aa6.55□□□□□ -1.36
SNHG4-208ENST00000514110 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
SNHG4-208ENST00000514110 A6NDN8 102 aa6.54□□□□□ -1.36
SNHG4-208ENST00000514110 IFITM1P13164 125 aa6.53□□□□□ -1.36
SNHG4-208ENST00000514110 KRTDAPP60985 99 aa6.53□□□□□ -1.36
SNHG4-208ENST00000514110 SNRPEP62304 92 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms