RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 TP73-AS1Q9UF72 201 aa8.05□□□□□ -1.12
SPCS3-204ENST00000513139 KRTAP13-2Q52LG2 175 aa8.04□□□□□ -1.12
SPCS3-204ENST00000513139 PAM16Q9Y3D7 125 aa8.04□□□□□ -1.12
SPCS3-204ENST00000513139 NPC2P61916 151 aa8.03□□□□□ -1.12
SPCS3-204ENST00000513139 FAM229BQ4G0N7 80 aa8.03□□□□□ -1.12
SPCS3-204ENST00000513139 SCGB1D4Q6XE38 83 aa8.03□□□□□ -1.12
SPCS3-204ENST00000513139 KRTAP19-1Q8IUB9 90 aa8.03□□□□□ -1.12
SPCS3-204ENST00000513139 GAGE10A6NGK3 116 aa8.02□□□□□ -1.13
SPCS3-204ENST00000513139 VPREB1P12018 145 aa8.02□□□□□ -1.13
SPCS3-204ENST00000513139 SPATA45Q537H7 98 aa8.02□□□□□ -1.13
SPCS3-204ENST00000513139 BOD1L2Q8IYS8 172 aa8.02□□□□□ -1.13
SPCS3-204ENST00000513139 VAMP8Q9BV40 100 aa8.02□□□□□ -1.13
SPCS3-204ENST00000513139 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.13
SPCS3-204ENST00000513139 TIMM17BO60830 172 aa8.01□□□□□ -1.13
SPCS3-204ENST00000513139 SOSTDC1Q6X4U4 206 aa8.01□□□□□ -1.13
SPCS3-204ENST00000513139 MRPL55Q7Z7F7 128 aaKnown RBP8.01□□□□□ -1.13
SPCS3-204ENST00000513139 C14orf144Q96I85 54 aa8.01□□□□□ -1.13
SPCS3-204ENST00000513139 KRTAP4-12Q9BQ66 201 aa8.01□□□□□ -1.13
SPCS3-204ENST00000513139 PPDPFQ9H3Y8 114 aa8.01□□□□□ -1.13
SPCS3-204ENST00000513139 IGLV5-37A0A075B6J1 123 aa8□□□□□ -1.13
SPCS3-204ENST00000513139 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
SPCS3-204ENST00000513139 LINC00167Q96N53 147 aa8□□□□□ -1.13
SPCS3-204ENST00000513139 LOC107984156A0A0G2JMH3 177 aa7.99□□□□□ -1.13
SPCS3-204ENST00000513139 RPL37AP8A6NKH3 93 aa7.99□□□□□ -1.13
SPCS3-204ENST00000513139 COX8AP10176 69 aa7.99□□□□□ -1.13
SPCS3-204ENST00000513139 RPL24P83731 157 aaKnown RBP7.99□□□□□ -1.13
SPCS3-204ENST00000513139 ARL17AQ8IVW1 177 aa7.99□□□□□ -1.13
SPCS3-204ENST00000513139 LINC00308Q8TCZ7 52 aa7.99□□□□□ -1.13
SPCS3-204ENST00000513139 ASB16-AS1Q495Z4 193 aa7.98□□□□□ -1.13
SPCS3-204ENST00000513139 LOC105371267A0A1B0GV96 52 aa7.97□□□□□ -1.13
SPCS3-204ENST00000513139 NCR3O14931 201 aa7.97□□□□□ -1.13
SPCS3-204ENST00000513139 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
SPCS3-204ENST00000513139 MIEN1Q9BRT3 115 aa7.97□□□□□ -1.13
SPCS3-204ENST00000513139 TMEM238C9JI98 176 aa7.96□□□□□ -1.14
SPCS3-204ENST00000513139 SPANXDQ9BXN6 97 aa7.96□□□□□ -1.14
SPCS3-204ENST00000513139 SPANXCQ9NY87 97 aa7.96□□□□□ -1.14
SPCS3-204ENST00000513139 IGKV2-28A0A075B6P5 120 aa7.95□□□□□ -1.14
SPCS3-204ENST00000513139 M0R378 163 aa7.95□□□□□ -1.14
SPCS3-204ENST00000513139 DLEU1O43261 78 aa7.95□□□□□ -1.14
SPCS3-204ENST00000513139 IGKV2D-28P01615 120 aa7.95□□□□□ -1.14
SPCS3-204ENST00000513139 FP248Q71RG6 208 aaPredicted RBP7.95□□□□□ -1.14
SPCS3-204ENST00000513139 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
SPCS3-204ENST00000513139 UBE2AP49459 152 aa7.94□□□□□ -1.14
SPCS3-204ENST00000513139 LINC00337Q8N6G1 96 aa7.94□□□□□ -1.14
SPCS3-204ENST00000513139 SLC25A34Q6PIV7 304 aa7.93□□□□□ -1.14
SPCS3-204ENST00000513139 NDUFC2O95298 119 aa7.92□□□□□ -1.14
SPCS3-204ENST00000513139 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
SPCS3-204ENST00000513139 IFITM1P13164 125 aa7.91□□□□□ -1.14
SPCS3-204ENST00000513139 S100A12P80511 92 aa7.91□□□□□ -1.14
SPCS3-204ENST00000513139 KRTAP13-3Q3SY46 172 aa7.91□□□□□ -1.14
SPCS3-204ENST00000513139 SPAG11AQ6PDA7 123 aa7.91□□□□□ -1.14
SPCS3-204ENST00000513139 C2orf91Q6ZV80 131 aa7.91□□□□□ -1.14
SPCS3-204ENST00000513139 Q6ZVH6 145 aa7.91□□□□□ -1.14
SPCS3-204ENST00000513139 KRTAP4-1Q9BYQ7 146 aa7.91□□□□□ -1.14
SPCS3-204ENST00000513139 SPANXB1Q9NS25 103 aaPredicted RBP7.91□□□□□ -1.14
SPCS3-204ENST00000513139 TRBV10-2A0A0K0K1G8 114 aa7.9□□□□□ -1.14
SPCS3-204ENST00000513139 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.14
SPCS3-204ENST00000513139 HIST1H4GQ99525 98 aa7.89□□□□□ -1.15
SPCS3-204ENST00000513139 KRTAP23-1A1A580 65 aa7.88□□□□□ -1.15
SPCS3-204ENST00000513139 SMIM6P0DI80 62 aa7.88□□□□□ -1.15
SPCS3-204ENST00000513139 DDTP30046 118 aa7.88□□□□□ -1.15
SPCS3-204ENST00000513139 COPS9Q8WXC6 57 aa7.88□□□□□ -1.15
SPCS3-204ENST00000513139 TMEM126AQ9H061 195 aa7.88□□□□□ -1.15
SPCS3-204ENST00000513139 HIGD1BQ9P298 99 aa7.88□□□□□ -1.15
SPCS3-204ENST00000513139 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.87□□□□□ -1.15
SPCS3-204ENST00000513139 IGLV6-57P01721 117 aa7.87□□□□□ -1.15
SPCS3-204ENST00000513139 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
SPCS3-204ENST00000513139 OR13C6PQ8NH95 151 aa7.87□□□□□ -1.15
SPCS3-204ENST00000513139 PRO1933Q9H354 126 aa7.87□□□□□ -1.15
SPCS3-204ENST00000513139 A4D1N5 150 aa7.86□□□□□ -1.15
SPCS3-204ENST00000513139 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
SPCS3-204ENST00000513139 KCNQ1DNQ9H478 68 aa7.86□□□□□ -1.15
SPCS3-204ENST00000513139 LCE3BQ5TA77 95 aa7.85□□□□□ -1.15
SPCS3-204ENST00000513139 C3orf22Q8N5N4 141 aa7.85□□□□□ -1.15
SPCS3-204ENST00000513139 UQCR10Q9UDW1 63 aa7.85□□□□□ -1.15
SPCS3-204ENST00000513139 PRYO14603 147 aa7.84□□□□□ -1.15
SPCS3-204ENST00000513139 FAM19A1Q7Z5A9 133 aa7.84□□□□□ -1.15
SPCS3-204ENST00000513139 A6NDN8 102 aa7.83□□□□□ -1.16
SPCS3-204ENST00000513139 PRLHP81277 87 aa7.83□□□□□ -1.16
SPCS3-204ENST00000513139 C12orf57Q99622 126 aa7.83□□□□□ -1.16
SPCS3-204ENST00000513139 TRAV23DV6A0A075B6W5 121 aa7.82□□□□□ -1.16
SPCS3-204ENST00000513139 SPRR1AP35321 89 aa7.82□□□□□ -1.16
SPCS3-204ENST00000513139 KRTAP4-16G5E9R7 235 aaPredicted RBP7.81□□□□□ -1.16
SPCS3-204ENST00000513139 ETDCA0A1B0GVM5 59 aa7.8□□□□□ -1.16
SPCS3-204ENST00000513139 ZNF73O43830 326 aaPredicted RBP7.8□□□□□ -1.16
SPCS3-204ENST00000513139 CFC1BP0CG36 223 aa7.8□□□□□ -1.16
SPCS3-204ENST00000513139 TAL2Q16559 108 aa7.8□□□□□ -1.16
SPCS3-204ENST00000513139 CEND1Q8N111 149 aa7.8□□□□□ -1.16
SPCS3-204ENST00000513139 TRAV13-2A0A0B4J235 113 aa7.79□□□□□ -1.16
SPCS3-204ENST00000513139 CFC1P0CG37 223 aa7.79□□□□□ -1.16
SPCS3-204ENST00000513139 SPINK1P00995 79 aa7.78□□□□□ -1.16
SPCS3-204ENST00000513139 FXYD2P54710 66 aa7.78□□□□□ -1.16
SPCS3-204ENST00000513139 HSD52Q0P140 79 aa7.78□□□□□ -1.16
SPCS3-204ENST00000513139 HIGD2AQ9BW72 106 aa7.77□□□□□ -1.17
SPCS3-204ENST00000513139 MT1HP80294 61 aa7.76□□□□□ -1.17
SPCS3-204ENST00000513139 C6orf99Q4VX62 202 aa7.76□□□□□ -1.17
SPCS3-204ENST00000513139 SMIM11BQ8TCY0 68 aa7.76□□□□□ -1.17
SPCS3-204ENST00000513139 KRTAP3-1Q9BYR8 98 aa7.76□□□□□ -1.17
SPCS3-204ENST00000513139 KRTAP19-2Q3LHN2 52 aa7.75□□□□□ -1.17
SPCS3-204ENST00000513139 Q8NBF4 154 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms