RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 DOPEY2Q9Y3R5 2298 aa0.92□□□□□ -2.26
CHD1-205ENST00000508756 C2CD3Q4AC94 2353 aa0.92□□□□□ -2.26
CHD1-205ENST00000508756 ABCA12Q86UK0 2595 aa0.92□□□□□ -2.26
CHD1-205ENST00000508756 ST20Q9HBF5 79 aa0.92□□□□□ -2.26
CHD1-205ENST00000508756 PLGLAQ15195 96 aa0.91□□□□□ -2.26
CHD1-205ENST00000508756 ADIRFQ15847 76 aa0.91□□□□□ -2.26
CHD1-205ENST00000508756 DEFB112Q30KQ8 113 aa0.91□□□□□ -2.26
CHD1-205ENST00000508756 SMR3AQ99954 134 aa0.91□□□□□ -2.26
CHD1-205ENST00000508756 A0A0G2JMZ2 1700 aa0.91□□□□□ -2.26
CHD1-205ENST00000508756 SPTBN2O15020 2390 aa0.91□□□□□ -2.26
CHD1-205ENST00000508756 K7EQZ3 153 aa0.9□□□□□ -2.27
CHD1-205ENST00000508756 Q9Y3F1 56 aa0.9□□□□□ -2.27
CHD1-205ENST00000508756 CELSR2Q9HCU4 2923 aa0.89□□□□□ -2.27
CHD1-205ENST00000508756 ANK2Q01484 3957 aa0.89□□□□□ -2.27
CHD1-205ENST00000508756 CFDP00746 253 aaPredicted RBP0.89□□□□□ -2.27
CHD1-205ENST00000508756 DEFB123Q8N688 67 aa0.89□□□□□ -2.27
CHD1-205ENST00000508756 UTRNP46939 3433 aa0.89□□□□□ -2.27
CHD1-205ENST00000508756 ZNF292O60281 2723 aa0.89□□□□□ -2.27
CHD1-205ENST00000508756 CHD9Q3L8U1 2897 aa0.88□□□□□ -2.27
CHD1-205ENST00000508756 KANTRA0A1W2PQU2 76 aa0.88□□□□□ -2.27
CHD1-205ENST00000508756 CEBPZOSA8MTT3 80 aa0.88□□□□□ -2.27
CHD1-205ENST00000508756 TPRP12270 2363 aaKnown RBP0.88□□□□□ -2.27
CHD1-205ENST00000508756 CACNA1EQ15878 2313 aa0.87□□□□□ -2.27
CHD1-205ENST00000508756 PDE4DIPQ5VU43 2346 aa0.87□□□□□ -2.27
CHD1-205ENST00000508756 H3BUT2 72 aa0.87□□□□□ -2.27
CHD1-205ENST00000508756 PRO3102Q9H379 93 aa0.87□□□□□ -2.27
CHD1-205ENST00000508756 SRCAPQ6ZRS2 3230 aa0.87□□□□□ -2.27
CHD1-205ENST00000508756 GOLGB1Q14789 3259 aaKnown RBP0.87□□□□□ -2.27
CHD1-205ENST00000508756 PIEZO1Q92508 2521 aa0.86□□□□□ -2.27
CHD1-205ENST00000508756 A0A1B0GUT8 65 aa0.86□□□□□ -2.27
CHD1-205ENST00000508756 ACYP1P07311 99 aa0.86□□□□□ -2.27
CHD1-205ENST00000508756 CD52P31358 61 aa0.85□□□□□ -2.27
CHD1-205ENST00000508756 COX6B1P14854 86 aa0.84□□□□□ -2.27
CHD1-205ENST00000508756 SPRR1BP22528 89 aa0.84□□□□□ -2.27
CHD1-205ENST00000508756 Q5BKY6 102 aa0.84□□□□□ -2.27
CHD1-205ENST00000508756 LOC730098B7Z3J9 87 aa0.83□□□□□ -2.28
CHD1-205ENST00000508756 BVES-AS1Q5T3Y7 98 aa0.83□□□□□ -2.28
CHD1-205ENST00000508756 FXYD6Q9H0Q3 95 aa0.83□□□□□ -2.28
CHD1-205ENST00000508756 CEP350Q5VT06 3117 aa0.82□□□□□ -2.28
CHD1-205ENST00000508756 SPRR1AP35321 89 aa0.82□□□□□ -2.28
CHD1-205ENST00000508756 GAFA1Q96PS6 74 aa0.82□□□□□ -2.28
CHD1-205ENST00000508756 TSC2P49815 1807 aa0.82□□□□□ -2.28
CHD1-205ENST00000508756 PCNTO95613 3336 aa0.82□□□□□ -2.28
CHD1-205ENST00000508756 TRAV21A0A0B4J279 112 aa0.81□□□□□ -2.28
CHD1-205ENST00000508756 KLK9Q2XQG4 91 aa0.81□□□□□ -2.28
CHD1-205ENST00000508756 USMG5Q96IX5 58 aa0.81□□□□□ -2.28
CHD1-205ENST00000508756 CEP290O15078 2479 aa0.81□□□□□ -2.28
CHD1-205ENST00000508756 BRCA2P51587 3418 aa0.81□□□□□ -2.28
CHD1-205ENST00000508756 HTTP42858 3142 aa0.8□□□□□ -2.28
CHD1-205ENST00000508756 SPINK1P00995 79 aa0.8□□□□□ -2.28
CHD1-205ENST00000508756 HMGA1P17096 107 aaKnown RBP0.8□□□□□ -2.28
CHD1-205ENST00000508756 WFDC9Q8NEX5 89 aa0.8□□□□□ -2.28
CHD1-205ENST00000508756 APLNQ9ULZ1 77 aa0.8□□□□□ -2.28
CHD1-205ENST00000508756 CENPFP49454 3210 aa0.8□□□□□ -2.28
CHD1-205ENST00000508756 PTPRQQ9UMZ3 2332 aa0.8□□□□□ -2.28
CHD1-205ENST00000508756 TNRC18O15417 2968 aaPredicted RBP0.79□□□□□ -2.28
CHD1-205ENST00000508756 MKI67P46013 3256 aaKnown RBP0.79□□□□□ -2.28
CHD1-205ENST00000508756 PIEZO2Q9H5I5 2752 aa0.79□□□□□ -2.28
CHD1-205ENST00000508756 SPTY2D1-AS1A0A0U1RR47 76 aa0.79□□□□□ -2.28
CHD1-205ENST00000508756 CPSF4LA6NMK7 179 aaKnown RBP0.79□□□□□ -2.28
CHD1-205ENST00000508756 I3L3M4 83 aa0.79□□□□□ -2.28
CHD1-205ENST00000508756 DEFB109BQ30KR1 87 aa0.79□□□□□ -2.28
CHD1-205ENST00000508756 NCOR1O75376 2440 aa0.79□□□□□ -2.28
CHD1-205ENST00000508756 DEFB106AQ8N104 65 aa0.78□□□□□ -2.28
CHD1-205ENST00000508756 IGF2RP11717 2491 aa0.78□□□□□ -2.28
CHD1-205ENST00000508756 LAMA3Q16787 3333 aa0.77□□□□□ -2.29
CHD1-205ENST00000508756 CDH23Q9H251 3354 aa0.77□□□□□ -2.29
CHD1-205ENST00000508756 FAM186AA6NE01 2351 aa0.77□□□□□ -2.29
CHD1-205ENST00000508756 COX7BP24311 80 aa0.77□□□□□ -2.29
CHD1-205ENST00000508756 DEFB124Q8NES8 71 aa0.77□□□□□ -2.29
CHD1-205ENST00000508756 SZT2Q5T011 3432 aa0.77□□□□□ -2.29
CHD1-205ENST00000508756 SPTBN5Q9NRC6 3674 aaKnown RBP0.76□□□□□ -2.29
CHD1-205ENST00000508756 PTPRZ1P23471 2315 aaPredicted RBP0.76□□□□□ -2.29
CHD1-205ENST00000508756 COX8AP10176 69 aa0.76□□□□□ -2.29
CHD1-205ENST00000508756 DEFB133Q30KQ1 61 aa0.76□□□□□ -2.29
CHD1-205ENST00000508756 Q5VSD8 79 aa0.76□□□□□ -2.29
CHD1-205ENST00000508756 NCBP2-AS2Q69YL0 99 aa0.76□□□□□ -2.29
CHD1-205ENST00000508756 COX14Q96I36 57 aa0.76□□□□□ -2.29
CHD1-205ENST00000508756 RANBP2P49792 3224 aaKnown RBP0.76□□□□□ -2.29
CHD1-205ENST00000508756 SPTBN1Q01082 2364 aaKnown RBP0.76□□□□□ -2.29
CHD1-205ENST00000508756 DNAH12Q6ZR08 3092 aa0.75□□□□□ -2.29
CHD1-205ENST00000508756 COL6A3P12111 3177 aa0.75□□□□□ -2.29
CHD1-205ENST00000508756 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
CHD1-205ENST00000508756 DEFB105AQ8NG35 78 aa0.75□□□□□ -2.29
CHD1-205ENST00000508756 CSMD3Q7Z407 3707 aa0.75□□□□□ -2.29
CHD1-205ENST00000508756 CHD7Q9P2D1 2997 aa0.75□□□□□ -2.29
CHD1-205ENST00000508756 TRANK1O15050 2925 aa0.75□□□□□ -2.29
CHD1-205ENST00000508756 UNC80Q8N2C7 3258 aa0.74□□□□□ -2.29
CHD1-205ENST00000508756 RIF1Q5UIP0 2472 aaKnown RBP0.74□□□□□ -2.29
CHD1-205ENST00000508756 MUC3AQ02505 3323 aa0.74□□□□□ -2.29
CHD1-205ENST00000508756 U3KQA8 63 aa0.74□□□□□ -2.29
CHD1-205ENST00000508756 EP300Q09472 2414 aaPredicted RBP0.74□□□□□ -2.29
CHD1-205ENST00000508756 CNOT1A5YKK6 2376 aaKnown RBP0.74□□□□□ -2.29
CHD1-205ENST00000508756 EYSQ5T1H1 3165 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 AKAP6Q13023 2319 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 ACACAQ13085 2346 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 PRUNE2Q8WUY3 3088 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 XIRP2A4UGR9 3374 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 VCANP13611 3396 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 OTOGQ6ZRI0 2925 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 340 ms