RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 IGLV7-43P04211 117 aa5.7□□□□□ -1.5
HTT-203ENST00000506137 PROK1P58294 105 aa5.7□□□□□ -1.5
HTT-203ENST00000506137 LINC00167Q96N53 147 aa5.7□□□□□ -1.5
HTT-203ENST00000506137 HEATR5BQ9P2D3 2071 aa5.7□□□□□ -1.5
HTT-203ENST00000506137 CADP27708 2225 aa5.7□□□□□ -1.5
HTT-203ENST00000506137 M0R3E3 92 aa5.69□□□□□ -1.5
HTT-203ENST00000506137 PDE6HQ13956 83 aa5.69□□□□□ -1.5
HTT-203ENST00000506137 DNAH1Q9P2D7 4330 aa5.68□□□□□ -1.5
HTT-203ENST00000506137 TRBV6-1A0A0K0K1D8 114 aa5.68□□□□□ -1.5
HTT-203ENST00000506137 M0R1W7 72 aa5.68□□□□□ -1.5
HTT-203ENST00000506137 P0C879 139 aa5.68□□□□□ -1.5
HTT-203ENST00000506137 P0C880 135 aa5.68□□□□□ -1.5
HTT-203ENST00000506137 KRTAP1-1Q07627 177 aa5.68□□□□□ -1.5
HTT-203ENST00000506137 DEFB114Q30KQ6 69 aa5.68□□□□□ -1.5
HTT-203ENST00000506137 MRPL36Q9P0J6 103 aaKnown RBP5.68□□□□□ -1.5
HTT-203ENST00000506137 CMYA5Q8N3K9 4069 aa5.68□□□□□ -1.5
HTT-203ENST00000506137 SACSQ9NZJ4 4579 aa5.67□□□□□ -1.5
HTT-203ENST00000506137 H0YGX0 51 aa5.67□□□□□ -1.5
HTT-203ENST00000506137 PRR34Q9NV39 138 aa5.67□□□□□ -1.5
HTT-203ENST00000506137 TRAV21A0A0B4J279 112 aa5.66□□□□□ -1.5
HTT-203ENST00000506137 NUPR2A6NF83 97 aa5.66□□□□□ -1.5
HTT-203ENST00000506137 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
HTT-203ENST00000506137 LYPD1Q8N2G4 141 aa5.66□□□□□ -1.5
HTT-203ENST00000506137 KLHL30-AS1Q8NEE0 82 aa5.66□□□□□ -1.5
HTT-203ENST00000506137 ZCCHC13Q8WW36 166 aaKnown RBP5.66□□□□□ -1.5
HTT-203ENST00000506137 HIGD2AQ9BW72 106 aa5.66□□□□□ -1.5
HTT-203ENST00000506137 KIAA1109Q2LD37 5005 aa5.65□□□□□ -1.5
HTT-203ENST00000506137 CTSGP08311 255 aa5.65□□□□□ -1.5
HTT-203ENST00000506137 MGPP08493 103 aa5.65□□□□□ -1.5
HTT-203ENST00000506137 DEFB133Q30KQ1 61 aa5.65□□□□□ -1.5
HTT-203ENST00000506137 C4orf3Q8WVX3 66 aa5.65□□□□□ -1.5
HTT-203ENST00000506137 M0R135 149 aa5.64□□□□□ -1.51
HTT-203ENST00000506137 UQCR11O14957 56 aa5.64□□□□□ -1.51
HTT-203ENST00000506137 IGKV1-17P01599 117 aa5.64□□□□□ -1.51
HTT-203ENST00000506137 FDCSPQ8NFU4 85 aa5.64□□□□□ -1.51
HTT-203ENST00000506137 FREM3P0C091 2139 aa5.63□□□□□ -1.51
HTT-203ENST00000506137 H0Y9P7 68 aa5.63□□□□□ -1.51
HTT-203ENST00000506137 NDUFA3O95167 84 aa5.63□□□□□ -1.51
HTT-203ENST00000506137 FREM1Q5H8C1 2179 aa5.63□□□□□ -1.51
HTT-203ENST00000506137 HERC1Q15751 4861 aa5.63□□□□□ -1.51
HTT-203ENST00000506137 IGLV2-18A0A075B6J9 118 aa5.62□□□□□ -1.51
HTT-203ENST00000506137 CCL22O00626 93 aa5.62□□□□□ -1.51
HTT-203ENST00000506137 Q8N1X5 172 aa5.62□□□□□ -1.51
HTT-203ENST00000506137 WFDC9Q8NEX5 89 aa5.62□□□□□ -1.51
HTT-203ENST00000506137 A0A1B0GU33 70 aa5.61□□□□□ -1.51
HTT-203ENST00000506137 RPS27LQ71UM5 84 aaKnown RBP5.61□□□□□ -1.51
HTT-203ENST00000506137 Q8N377 158 aa5.61□□□□□ -1.51
HTT-203ENST00000506137 MALRD1Q5VYJ5 2156 aa5.6□□□□□ -1.51
HTT-203ENST00000506137 IGKV3D-15A0A087WSY6 115 aa5.6□□□□□ -1.51
HTT-203ENST00000506137 LRCOL1A6NCL2 159 aa5.6□□□□□ -1.51
HTT-203ENST00000506137 CCL18P55774 89 aa5.6□□□□□ -1.51
HTT-203ENST00000506137 TTTY12Q9BZ98 90 aa5.6□□□□□ -1.51
HTT-203ENST00000506137 MINOS1-NBL1R4GNA1 71 aa5.6□□□□□ -1.51
HTT-203ENST00000506137 HIGD2BQ4VC39 106 aa5.59□□□□□ -1.51
HTT-203ENST00000506137 WFDC10AQ9H1F0 79 aa5.59□□□□□ -1.51
HTT-203ENST00000506137 ABCA13Q86UQ4 5058 aa5.58□□□□□ -1.52
HTT-203ENST00000506137 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
HTT-203ENST00000506137 CCL3L1P16619 93 aa5.58□□□□□ -1.52
HTT-203ENST00000506137 ZNF137PP52743 207 aa5.58□□□□□ -1.52
HTT-203ENST00000506137 RNF5Q99942 180 aa5.58□□□□□ -1.52
HTT-203ENST00000506137 CR1P17927 2039 aa5.58□□□□□ -1.52
HTT-203ENST00000506137 ARFGEF3Q5TH69 2177 aa5.57□□□□□ -1.52
HTT-203ENST00000506137 LOC110117498A0A087WWA1 95 aa5.57□□□□□ -1.52
HTT-203ENST00000506137 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
HTT-203ENST00000506137 KLK9Q9UKQ9 250 aa5.57□□□□□ -1.52
HTT-203ENST00000506137 TFF3Q07654 80 aa5.56□□□□□ -1.52
HTT-203ENST00000506137 HCP5Q6MZN7 132 aa5.56□□□□□ -1.52
HTT-203ENST00000506137 LINC00322Q6ZN03 302 aaPredicted RBP5.56□□□□□ -1.52
HTT-203ENST00000506137 ARHGAP32A7KAX9 2087 aa5.55□□□□□ -1.52
HTT-203ENST00000506137 LYSTQ99698 3801 aa5.55□□□□□ -1.52
HTT-203ENST00000506137 IGKV3-7A0A075B6H7 116 aa5.55□□□□□ -1.52
HTT-203ENST00000506137 Q5W150 140 aa5.55□□□□□ -1.52
HTT-203ENST00000506137 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
HTT-203ENST00000506137 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
HTT-203ENST00000506137 SPTY2D1-AS1A0A0U1RR47 76 aa5.54□□□□□ -1.52
HTT-203ENST00000506137 CPSF4LA6NMK7 179 aaKnown RBP5.54□□□□□ -1.52
HTT-203ENST00000506137 SPRR4Q96PI1 79 aa5.54□□□□□ -1.52
HTT-203ENST00000506137 ARHGAP5-AS1Q96IT6 56 aa5.53□□□□□ -1.52
HTT-203ENST00000506137 GAFA1Q96PS6 74 aa5.53□□□□□ -1.52
HTT-203ENST00000506137 MED12Q93074 2177 aa5.52□□□□□ -1.53
HTT-203ENST00000506137 CSMD3Q7Z407 3707 aa5.52□□□□□ -1.53
HTT-203ENST00000506137 COX17Q14061 63 aa5.51□□□□□ -1.53
HTT-203ENST00000506137 CNFNQ9BYD5 112 aa5.51□□□□□ -1.53
HTT-203ENST00000506137 A0A1W2PPR1 153 aa5.5□□□□□ -1.53
HTT-203ENST00000506137 NDUFA4O00483 81 aa5.5□□□□□ -1.53
HTT-203ENST00000506137 NDPQ00604 133 aa5.5□□□□□ -1.53
HTT-203ENST00000506137 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
HTT-203ENST00000506137 ZNF625Q96I27 306 aaPredicted RBP5.5□□□□□ -1.53
HTT-203ENST00000506137 KLK12Q9UKR0 248 aa5.5□□□□□ -1.53
HTT-203ENST00000506137 FRAS1Q86XX4 4008 aa5.5□□□□□ -1.53
HTT-203ENST00000506137 DNAJC13O75165 2243 aa5.5□□□□□ -1.53
HTT-203ENST00000506137 TRGV4A0A0C4DH28 118 aa5.49□□□□□ -1.53
HTT-203ENST00000506137 DOCK10Q96BY6 2186 aa5.49□□□□□ -1.53
HTT-203ENST00000506137 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
HTT-203ENST00000506137 IAPPP10997 89 aa5.48□□□□□ -1.53
HTT-203ENST00000506137 MRGPRG-AS1Q2M3A8 158 aa5.48□□□□□ -1.53
HTT-203ENST00000506137 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
HTT-203ENST00000506137 MAPK1IP1LQ8NDC0 245 aa5.48□□□□□ -1.53
HTT-203ENST00000506137 COX14Q96I36 57 aa5.48□□□□□ -1.53
HTT-203ENST00000506137 IGKV3-20P01619 116 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms