RNA–Protein interactions for RNA: ENST00000505885.1

SRPK1-207, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-207ENST00000505885 Q8NDZ9 215 aa1.43□□□□□ -2.18
SRPK1-207ENST00000505885 RPL39LQ96EH5 51 aaKnown RBP1.43□□□□□ -2.18
SRPK1-207ENST00000505885 C20orf78Q9BR46 151 aa1.43□□□□□ -2.18
SRPK1-207ENST00000505885 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
SRPK1-207ENST00000505885 HERC2O95714 4834 aa1.43□□□□□ -2.18
SRPK1-207ENST00000505885 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
SRPK1-207ENST00000505885 C11orf86A6NJI1 115 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 D6R8Y8 96 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 I3L3M4 83 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST1H2BKO60814 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 NCR2O95944 276 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 PPP1R17O96001 155 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 S100A8P05109 93 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST1H2BJP06899 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 SMIM17P0DL12 118 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST1H2BOP23527 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 CKS2P33552 79 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST1H2BBP33778 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST1H2BDP58876 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST1H2BCP62807 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 ZNF56Q15929 161 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST2H2BEQ16778 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.42□□□□□ -2.18
SRPK1-207ENST00000505885 ENHOQ6UWT2 76 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 DEFB104AQ8WTQ1 72 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST1H2BHQ93079 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST1H2BNQ99877 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 HIST1H2BMQ99879 126 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 ST20Q9HBF5 79 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 LAMTOR2Q9Y2Q5 125 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 NEBP20929 6669 aa1.42□□□□□ -2.18
SRPK1-207ENST00000505885 ABCA13Q86UQ4 5058 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 PKHD1L1Q86WI1 4243 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 TRBV25-1A0A075B6N4 114 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 IGHV1-24A0A0C4DH33 117 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 LOC105371267A0A1B0GV96 52 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 IGIPA6NJ69 53 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 K7EMI3 77 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 M0R2N4 97 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 LST1O00453 97 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 NUPR1O60356 82 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 MT-ND6P03923 174 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 FABP4P15090 132 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 IFI27P40305 119 aaPredicted RBP1.41□□□□□ -2.18
SRPK1-207ENST00000505885 RPL39P62891 51 aaKnown RBP1.41□□□□□ -2.18
SRPK1-207ENST00000505885 Q0VG73 95 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 TMEM97Q5BJF2 176 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 C1orf134Q5TEV5 83 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 FAM19A2Q8N3H0 131 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 Q8N8P6 123 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 C18orf32Q8TCD1 76 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 PRELID3AQ96N28 172 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 AMELXQ99217 191 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 TIMM21Q9BVV7 248 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 SMIM2Q9BVW6 85 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 CDC42SE2Q9NRR3 84 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 UBE2D4Q9Y2X8 147 aa1.41□□□□□ -2.18
SRPK1-207ENST00000505885 FAT3Q8TDW7 4589 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 IGHV3-64A0A075B6Q5 118 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.4□□□□□ -2.19
SRPK1-207ENST00000505885 LINC00959A0A1B0GUT2 108 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 IGKV2-29A2NJV5 120 aaPredicted RBP1.4□□□□□ -2.19
SRPK1-207ENST00000505885 A8MUN3 132 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 TMEM262E9PQX1 116 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 IGHV3-30P01768 117 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 IGHV3-33P01772 117 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 IGHV3-30-5P0DP03 117 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 FGF6P10767 208 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 ZNF25P17030 456 aaPredicted RBP1.4□□□□□ -2.19
SRPK1-207ENST00000505885 FCER1GP30273 86 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 MRPS36P82909 103 aaKnown RBP1.4□□□□□ -2.19
SRPK1-207ENST00000505885 PMAIP1Q13794 54 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 WFDC2Q14508 124 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 PMCHL1Q16048 86 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 UBE2DNLQ8IWF7 75 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 HIST3H2BBQ8N257 126 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 LINC00269Q8N2A0 174 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 C10orf126Q8N4M7 172 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 TOMM6Q96B49 74 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 NXT2Q9NPJ8 142 aaKnown RBP1.4□□□□□ -2.19
SRPK1-207ENST00000505885 HERC1Q15751 4861 aa1.4□□□□□ -2.19
SRPK1-207ENST00000505885 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
SRPK1-207ENST00000505885 A0A087WTM6 91 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 A0A087WX48 190 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 CCL25O15444 150 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 ANGP03950 147 aaKnown RBP1.39□□□□□ -2.19
SRPK1-207ENST00000505885 UBE2D1P51668 147 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 KRTDAPP60985 99 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 PKIAP61925 76 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 HIST1H4AP62805 103 aaKnown RBP1.39□□□□□ -2.19
SRPK1-207ENST00000505885 COX6A2Q02221 97 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 OR5A1Q8NGJ0 315 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 C12orf57Q99622 126 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 HIST1H2BLQ99880 126 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 SPANXA1Q9NS26 97 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 TNXBP22105 4242 aa1.39□□□□□ -2.19
SRPK1-207ENST00000505885 LINC01549A6NIU2 74 aa1.38□□□□□ -2.19
SRPK1-207ENST00000505885 LEPROTL1O95214 131 aa1.38□□□□□ -2.19
SRPK1-207ENST00000505885 C3orf79P0CE67 100 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms