RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 B5MCH6 92 aa8.29□□□□□ -1.08
HOXC9-202ENST00000504557 GAGE2AQ6NT46 116 aa8.29□□□□□ -1.08
HOXC9-202ENST00000504557 OR13C6PQ8NH95 151 aa8.29□□□□□ -1.08
HOXC9-202ENST00000504557 ERC2-IT1O76042 136 aa8.28□□□□□ -1.08
HOXC9-202ENST00000504557 LINC00308Q8TCZ7 52 aa8.28□□□□□ -1.08
HOXC9-202ENST00000504557 LITAFQ99732 161 aa8.28□□□□□ -1.08
HOXC9-202ENST00000504557 LCE2BO14633 110 aa8.27□□□□□ -1.09
HOXC9-202ENST00000504557 IGLV6-57P01721 117 aa8.27□□□□□ -1.09
HOXC9-202ENST00000504557 RNF213Q63HN8 5207 aa8.27□□□□□ -1.09
HOXC9-202ENST00000504557 ANKRD39Q53RE8 183 aa8.26□□□□□ -1.09
HOXC9-202ENST00000504557 SCGB1D4Q6XE38 83 aa8.26□□□□□ -1.09
HOXC9-202ENST00000504557 Q6ZRX8 168 aa8.26□□□□□ -1.09
HOXC9-202ENST00000504557 Q9BRP9 147 aa8.26□□□□□ -1.09
HOXC9-202ENST00000504557 IGLV9-49A0A0B4J1Y8 123 aa8.25□□□□□ -1.09
HOXC9-202ENST00000504557 ZNF73O43830 326 aaPredicted RBP8.25□□□□□ -1.09
HOXC9-202ENST00000504557 TIMM17BO60830 172 aa8.25□□□□□ -1.09
HOXC9-202ENST00000504557 SPANXCQ9NY87 97 aa8.25□□□□□ -1.09
HOXC9-202ENST00000504557 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
HOXC9-202ENST00000504557 Q8NBF4 154 aa8.24□□□□□ -1.09
HOXC9-202ENST00000504557 S100A1P23297 94 aa8.23□□□□□ -1.09
HOXC9-202ENST00000504557 S100A2P29034 98 aa8.23□□□□□ -1.09
HOXC9-202ENST00000504557 HINT1P49773 126 aaPredicted RBP8.22□□□□□ -1.09
HOXC9-202ENST00000504557 MOBPQ13875 183 aa8.22□□□□□ -1.09
HOXC9-202ENST00000504557 JOSD1Q15040 202 aaPredicted RBP8.22□□□□□ -1.09
HOXC9-202ENST00000504557 PCP2Q8IVA1 136 aa8.21□□□□□ -1.1
HOXC9-202ENST00000504557 HIST3H2BBQ8N257 126 aa8.2□□□□□ -1.1
HOXC9-202ENST00000504557 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
HOXC9-202ENST00000504557 S100A6P06703 90 aa8.19□□□□□ -1.1
HOXC9-202ENST00000504557 LINC00483Q53H64 154 aa8.19□□□□□ -1.1
HOXC9-202ENST00000504557 C9orf153Q5TBE3 101 aa8.19□□□□□ -1.1
HOXC9-202ENST00000504557 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
HOXC9-202ENST00000504557 CBY1Q9Y3M2 126 aa8.19□□□□□ -1.1
HOXC9-202ENST00000504557 SPAG11AQ6PDA7 123 aa8.18□□□□□ -1.1
HOXC9-202ENST00000504557 SPANXDQ9BXN6 97 aa8.18□□□□□ -1.1
HOXC9-202ENST00000504557 IGLV7-46A0A075B6I9 117 aa8.17□□□□□ -1.1
HOXC9-202ENST00000504557 LINC00518Q8N0U6 118 aa8.17□□□□□ -1.1
HOXC9-202ENST00000504557 AKR1D1P51857 326 aa8.16□□□□□ -1.1
HOXC9-202ENST00000504557 C6orf99Q4VX62 202 aa8.16□□□□□ -1.1
HOXC9-202ENST00000504557 MUSTN1Q8IVN3 82 aa8.16□□□□□ -1.1
HOXC9-202ENST00000504557 A6NDN8 102 aa8.15□□□□□ -1.1
HOXC9-202ENST00000504557 COX7BP24311 80 aa8.15□□□□□ -1.1
HOXC9-202ENST00000504557 HSBP1L1C9JCN9 74 aa8.14□□□□□ -1.11
HOXC9-202ENST00000504557 COPS9Q8WXC6 57 aa8.14□□□□□ -1.11
HOXC9-202ENST00000504557 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
HOXC9-202ENST00000504557 IFITM1P13164 125 aa8.13□□□□□ -1.11
HOXC9-202ENST00000504557 SNRPEP62304 92 aaKnown RBP8.13□□□□□ -1.11
HOXC9-202ENST00000504557 DEFB105AQ8NG35 78 aa8.12□□□□□ -1.11
HOXC9-202ENST00000504557 DHRS4-AS1Q9P1J3 65 aa8.12□□□□□ -1.11
HOXC9-202ENST00000504557 SCGB1D1O95968 90 aa8.11□□□□□ -1.11
HOXC9-202ENST00000504557 SPINK1P00995 79 aa8.11□□□□□ -1.11
HOXC9-202ENST00000504557 ELOF1P60002 83 aaKnown RBP8.11□□□□□ -1.11
HOXC9-202ENST00000504557 SSBP3-AS1Q7Z2R9 100 aa8.11□□□□□ -1.11
HOXC9-202ENST00000504557 CTAG1AP78358 180 aa8.1□□□□□ -1.11
HOXC9-202ENST00000504557 Q6ZVH6 145 aa8.1□□□□□ -1.11
HOXC9-202ENST00000504557 TAL2Q16559 108 aa8.09□□□□□ -1.11
HOXC9-202ENST00000504557 HRCT1Q6UXD1 115 aa8.09□□□□□ -1.11
HOXC9-202ENST00000504557 TPRXLQ17RH7 258 aa8.08□□□□□ -1.12
HOXC9-202ENST00000504557 Q1RN00 199 aa8.08□□□□□ -1.12
HOXC9-202ENST00000504557 TRAV13-2A0A0B4J235 113 aa8.06□□□□□ -1.12
HOXC9-202ENST00000504557 SLC25A34Q6PIV7 304 aa8.06□□□□□ -1.12
HOXC9-202ENST00000504557 LAMTOR3Q9UHA4 124 aa8.06□□□□□ -1.12
HOXC9-202ENST00000504557 A0A1B0GWB2 263 aa8.05□□□□□ -1.12
HOXC9-202ENST00000504557 FP248Q71RG6 208 aaPredicted RBP8.05□□□□□ -1.12
HOXC9-202ENST00000504557 SMIM11BQ8TCY0 68 aa8.05□□□□□ -1.12
HOXC9-202ENST00000504557 C5orf52A6NGY3 159 aa8.04□□□□□ -1.12
HOXC9-202ENST00000504557 Q8N377 158 aa8.04□□□□□ -1.12
HOXC9-202ENST00000504557 C12orf57Q99622 126 aa8.04□□□□□ -1.12
HOXC9-202ENST00000504557 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
HOXC9-202ENST00000504557 A4D1N5 150 aa8.03□□□□□ -1.12
HOXC9-202ENST00000504557 SPRR1BP22528 89 aa8.03□□□□□ -1.12
HOXC9-202ENST00000504557 SLC25A20O43772 301 aa8.02□□□□□ -1.13
HOXC9-202ENST00000504557 TEX49A0A1B0GTD5 131 aa8.01□□□□□ -1.13
HOXC9-202ENST00000504557 HIST1H4GQ99525 98 aa8.01□□□□□ -1.13
HOXC9-202ENST00000504557 RPS29P62273 56 aaKnown RBP8□□□□□ -1.13
HOXC9-202ENST00000504557 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
HOXC9-202ENST00000504557 PAM16Q9Y3D7 125 aa7.99□□□□□ -1.13
HOXC9-202ENST00000504557 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
HOXC9-202ENST00000504557 H7C2G1 150 aa7.98□□□□□ -1.13
HOXC9-202ENST00000504557 COX8AP10176 69 aa7.98□□□□□ -1.13
HOXC9-202ENST00000504557 VAMP3Q15836 100 aa7.98□□□□□ -1.13
HOXC9-202ENST00000504557 C14orf144Q96I85 54 aa7.98□□□□□ -1.13
HOXC9-202ENST00000504557 NHP2Q9NX24 153 aaKnown RBP7.98□□□□□ -1.13
HOXC9-202ENST00000504557 MUC2Q02817 5179 aa7.98□□□□□ -1.13
HOXC9-202ENST00000504557 PRO1933Q9H354 126 aa7.97□□□□□ -1.13
HOXC9-202ENST00000504557 LINC01547P58512 204 aaPredicted RBP7.96□□□□□ -1.14
HOXC9-202ENST00000504557 SPATA45Q537H7 98 aa7.96□□□□□ -1.14
HOXC9-202ENST00000504557 LIMD2Q9BT23 127 aa7.96□□□□□ -1.14
HOXC9-202ENST00000504557 A0A0U1RQV1 116 aa7.95□□□□□ -1.14
HOXC9-202ENST00000504557 SMIM29Q86T20 159 aa7.95□□□□□ -1.14
HOXC9-202ENST00000504557 IGLV5-48A0A075B6I7 105 aa7.94□□□□□ -1.14
HOXC9-202ENST00000504557 VAMP8Q9BV40 100 aa7.94□□□□□ -1.14
HOXC9-202ENST00000504557 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
HOXC9-202ENST00000504557 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
HOXC9-202ENST00000504557 Q6ZQY7 126 aa7.92□□□□□ -1.14
HOXC9-202ENST00000504557 MUC17Q685J3 4493 aa7.91□□□□□ -1.14
HOXC9-202ENST00000504557 F8WEM9 126 aa7.91□□□□□ -1.14
HOXC9-202ENST00000504557 RAB37Q96AX2 223 aa7.91□□□□□ -1.14
HOXC9-202ENST00000504557 DLEU1O43261 78 aa7.9□□□□□ -1.14
HOXC9-202ENST00000504557 C9orf92A6NGG3 77 aa7.89□□□□□ -1.15
HOXC9-202ENST00000504557 CFC1BP0CG36 223 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms