RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 FREM1Q5H8C1 2179 aa1.04□□□□□ -2.24
HMGB3P17-201ENST00000504195 KIAA0100Q14667 2235 aaKnown RBP1.04□□□□□ -2.24
HMGB3P17-201ENST00000504195 ESPL1Q14674 2120 aa1.03□□□□□ -2.24
HMGB3P17-201ENST00000504195 GVQW2A0A096LPI5 108 aaPredicted RBP1.03□□□□□ -2.24
HMGB3P17-201ENST00000504195 H0YGG7 62 aa1.03□□□□□ -2.24
HMGB3P17-201ENST00000504195 SSBP3-AS1Q7Z2R9 100 aa1.03□□□□□ -2.24
HMGB3P17-201ENST00000504195 LEAP2Q969E1 77 aa1.03□□□□□ -2.24
HMGB3P17-201ENST00000504195 DNAJC13O75165 2243 aa1.03□□□□□ -2.25
HMGB3P17-201ENST00000504195 DEFB108AA8MXU0 73 aa1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 TNCP24821 2201 aa1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 COX6A2Q02221 97 aa1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 PRR9Q5T870 116 aa1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 Q6ZRX8 168 aa1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 PLAC4Q8WY50 150 aa1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 USMG5Q96IX5 58 aa1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 MRPL34Q9BQ48 92 aaKnown RBP1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 CRIPTQ9P021 101 aa1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 KAAG1Q9UBP8 84 aa1.02□□□□□ -2.25
HMGB3P17-201ENST00000504195 MMP24-AS1A0A0U1RRL7 71 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 G3V318 75 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 PRB1P04280 392 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 TPRXLQ17RH7 258 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 DEFB109BQ30KR1 87 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 WFDC10BQ8IUB3 73 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 WFDC13Q8IUB5 93 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 KRTAP13-1Q8IUC0 172 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 SPACA4Q8TDM5 124 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 PRO3102Q9H379 93 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 GPR179Q6PRD1 2367 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 CACNA1CQ13936 2221 aa1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 PRRC2BQ5JSZ5 2229 aaKnown RBP1.01□□□□□ -2.25
HMGB3P17-201ENST00000504195 SDK2Q58EX2 2172 aa1□□□□□ -2.25
HMGB3P17-201ENST00000504195 DOCK10Q96BY6 2186 aa1□□□□□ -2.25
HMGB3P17-201ENST00000504195 PRB3Q04118 309 aaPredicted RBP1□□□□□ -2.25
HMGB3P17-201ENST00000504195 SPINK13Q1W4C9 94 aa1□□□□□ -2.25
HMGB3P17-201ENST00000504195 Q6ZRN7 208 aaPredicted RBP1□□□□□ -2.25
HMGB3P17-201ENST00000504195 FBN3Q75N90 2809 aa1□□□□□ -2.25
HMGB3P17-201ENST00000504195 USF3Q68DE3 2245 aa1□□□□□ -2.25
HMGB3P17-201ENST00000504195 ALPK2Q86TB3 2170 aa1□□□□□ -2.25
HMGB3P17-201ENST00000504195 KNTC1P50748 2209 aa0.99□□□□□ -2.25
HMGB3P17-201ENST00000504195 A8MTW9 85 aa0.99□□□□□ -2.25
HMGB3P17-201ENST00000504195 H3BUA1 57 aa0.99□□□□□ -2.25
HMGB3P17-201ENST00000504195 PCOTHQ58A44 107 aa0.99□□□□□ -2.25
HMGB3P17-201ENST00000504195 TOMM7Q9P0U1 55 aa0.99□□□□□ -2.25
HMGB3P17-201ENST00000504195 ALMS1Q8TCU4 4167 aa0.99□□□□□ -2.25
HMGB3P17-201ENST00000504195 SPAG17Q6Q759 2223 aa0.99□□□□□ -2.25
HMGB3P17-201ENST00000504195 H0YAA0 97 aa0.98□□□□□ -2.25
HMGB3P17-201ENST00000504195 STATHP02808 62 aa0.98□□□□□ -2.25
HMGB3P17-201ENST00000504195 DEFB123Q8N688 67 aa0.98□□□□□ -2.25
HMGB3P17-201ENST00000504195 F5P12259 2224 aa0.98□□□□□ -2.25
HMGB3P17-201ENST00000504195 UNC13CQ8NB66 2214 aa0.98□□□□□ -2.25
HMGB3P17-201ENST00000504195 CADP27708 2225 aa0.97□□□□□ -2.25
HMGB3P17-201ENST00000504195 SEC16AO15027 2179 aa0.97□□□□□ -2.25
HMGB3P17-201ENST00000504195 SPRR1AP35321 89 aa0.97□□□□□ -2.25
HMGB3P17-201ENST00000504195 RPL37P61927 97 aaKnown RBP0.97□□□□□ -2.25
HMGB3P17-201ENST00000504195 H1FX-AS1Q4G0G2 97 aa0.97□□□□□ -2.25
HMGB3P17-201ENST00000504195 CLPSL2Q6UWE3 100 aa0.97□□□□□ -2.25
HMGB3P17-201ENST00000504195 UNQ6190/PRO20217Q6UXQ8 127 aa0.97□□□□□ -2.25
HMGB3P17-201ENST00000504195 Q6ZSA8 131 aa0.97□□□□□ -2.25
HMGB3P17-201ENST00000504195 ZFHX2Q9C0A1 2572 aaPredicted RBP0.97□□□□□ -2.25
HMGB3P17-201ENST00000504195 H3BUX3 64 aa0.96□□□□□ -2.26
HMGB3P17-201ENST00000504195 K7EIL1 84 aa0.96□□□□□ -2.26
HMGB3P17-201ENST00000504195 SPRR1BP22528 89 aa0.96□□□□□ -2.26
HMGB3P17-201ENST00000504195 KRTAP12-3P60328 96 aa0.96□□□□□ -2.26
HMGB3P17-201ENST00000504195 UBE2DNLQ8IWF7 75 aa0.96□□□□□ -2.26
HMGB3P17-201ENST00000504195 CUL9Q8IWT3 2517 aa0.96□□□□□ -2.26
HMGB3P17-201ENST00000504195 MED13LQ71F56 2210 aa0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 DIDO1Q9BTC0 2240 aaKnown RBP0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 LYNX1P0DP58 116 aa0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 BRD3OSQ6XYD6 125 aa0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 DEFB119Q8N690 84 aa0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 Q9Y3F1 56 aa0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 RP1P56715 2156 aa0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 PRR14LQ5THK1 2151 aa0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 ANKRD17O75179 2603 aaKnown RBP0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 SDK1Q7Z5N4 2213 aa0.95□□□□□ -2.26
HMGB3P17-201ENST00000504195 PDE4DIPQ5VU43 2346 aa0.94□□□□□ -2.26
HMGB3P17-201ENST00000504195 ABCA4P78363 2273 aa0.94□□□□□ -2.26
HMGB3P17-201ENST00000504195 NAV3Q8IVL0 2385 aa0.93□□□□□ -2.26
HMGB3P17-201ENST00000504195 PTPRQQ9UMZ3 2332 aa0.93□□□□□ -2.26
HMGB3P17-201ENST00000504195 DEFB130BP0DP73 79 aa0.93□□□□□ -2.26
HMGB3P17-201ENST00000504195 DEFB130AP0DP74 79 aa0.93□□□□□ -2.26
HMGB3P17-201ENST00000504195 DEFB110Q30KQ9 67 aa0.93□□□□□ -2.26
HMGB3P17-201ENST00000504195 DEFB104AQ8WTQ1 72 aa0.93□□□□□ -2.26
HMGB3P17-201ENST00000504195 RHPN1-AS1Q9BWJ2 59 aa0.93□□□□□ -2.26
HMGB3P17-201ENST00000504195 ASXL3Q9C0F0 2248 aa0.93□□□□□ -2.26
HMGB3P17-201ENST00000504195 TECTAO75443 2155 aa0.93□□□□□ -2.26
HMGB3P17-201ENST00000504195 BRWD1Q9NSI6 2320 aa0.92□□□□□ -2.26
HMGB3P17-201ENST00000504195 APELAP0DMC3 54 aa0.92□□□□□ -2.26
HMGB3P17-201ENST00000504195 NOP10Q9NPE3 64 aaKnown RBP0.92□□□□□ -2.26
HMGB3P17-201ENST00000504195 RTTNQ86VV8 2226 aa0.91□□□□□ -2.26
HMGB3P17-201ENST00000504195 DEFB105AQ8NG35 78 aa0.91□□□□□ -2.26
HMGB3P17-201ENST00000504195 KRTAP13-2Q52LG2 175 aa0.9□□□□□ -2.27
HMGB3P17-201ENST00000504195 Q5VSD8 79 aa0.9□□□□□ -2.27
HMGB3P17-201ENST00000504195 URB1O60287 2271 aaKnown RBP0.9□□□□□ -2.27
HMGB3P17-201ENST00000504195 CD52P31358 61 aa0.89□□□□□ -2.27
HMGB3P17-201ENST00000504195 PRLHP81277 87 aa0.88□□□□□ -2.27
HMGB3P17-201ENST00000504195 LELP1Q5T871 98 aa0.88□□□□□ -2.27
HMGB3P17-201ENST00000504195 DEFB108BQ8NET1 73 aa0.88□□□□□ -2.27
HMGB3P17-201ENST00000504195 C10orf95Q9H7T3 257 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms