RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 IGLV1-50A0A075B6I6 118 aa14.45□□□□□ -0.1
PCDH1-204ENST00000503492 IGKV3D-7A0A0C4DH55 119 aa14.45□□□□□ -0.1
PCDH1-204ENST00000503492 GHRHP01286 108 aa14.45□□□□□ -0.1
PCDH1-204ENST00000503492 FAM236AA0A1B0GUQ0 79 aa14.44□□□□□ -0.1
PCDH1-204ENST00000503492 FAM236BA0A1B0GV22 79 aa14.44□□□□□ -0.1
PCDH1-204ENST00000503492 PSCAO43653 123 aa14.44□□□□□ -0.1
PCDH1-204ENST00000503492 M0R2N4 97 aa14.44□□□□□ -0.1
PCDH1-204ENST00000503492 DSCR8Q96T75 97 aa14.44□□□□□ -0.1
PCDH1-204ENST00000503492 FAM19A5Q7Z5A7 132 aaPredicted RBP14.43□□□□□ -0.1
PCDH1-204ENST00000503492 DNAH10Q8IVF4 4471 aa14.42□□□□□ -0.1
PCDH1-204ENST00000503492 PRYO14603 147 aa14.41□□□□□ -0.1
PCDH1-204ENST00000503492 KRTAP4-16G5E9R7 235 aaPredicted RBP14.41□□□□□ -0.1
PCDH1-204ENST00000503492 MRPL55Q7Z7F7 128 aaKnown RBP14.4□□□□□ -0.1
PCDH1-204ENST00000503492 SPRR1AP35321 89 aa14.4□□□□□ -0.1
PCDH1-204ENST00000503492 CNBPP62633 177 aaKnown RBP14.4□□□□□ -0.1
PCDH1-204ENST00000503492 NUPR2A6NF83 97 aa14.39□□□□□ -0.11
PCDH1-204ENST00000503492 CSMD3Q7Z407 3707 aa14.38□□□□□ -0.11
PCDH1-204ENST00000503492 TRBV7-4A0A0J9YYF1 115 aa14.38□□□□□ -0.11
PCDH1-204ENST00000503492 PDE6GP18545 87 aa14.38□□□□□ -0.11
PCDH1-204ENST00000503492 B5MCH6 92 aa14.38□□□□□ -0.11
PCDH1-204ENST00000503492 Q6ZRX8 168 aa14.38□□□□□ -0.11
PCDH1-204ENST00000503492 A0A096LNI7 61 aa14.37□□□□□ -0.11
PCDH1-204ENST00000503492 Q9BRP9 147 aa14.36□□□□□ -0.11
PCDH1-204ENST00000503492 UBL5Q9BZL1 73 aa14.35□□□□□ -0.11
PCDH1-204ENST00000503492 ETDCA0A1B0GVM5 59 aa14.34□□□□□ -0.11
PCDH1-204ENST00000503492 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.34□□□□□ -0.11
PCDH1-204ENST00000503492 C16orf90A8MZG2 172 aa14.34□□□□□ -0.11
PCDH1-204ENST00000503492 DHRS4-AS1Q9P1J3 65 aa14.34□□□□□ -0.11
PCDH1-204ENST00000503492 DNAH7Q8WXX0 4024 aa14.33□□□□□ -0.12
PCDH1-204ENST00000503492 NBDYA0A0U1RRE5 68 aa14.33□□□□□ -0.12
PCDH1-204ENST00000503492 IGKV2-24A0A0C4DH68 120 aa14.32□□□□□ -0.12
PCDH1-204ENST00000503492 CCDC179H3BU77 68 aa14.32□□□□□ -0.12
PCDH1-204ENST00000503492 PLECQ15149 4684 aaKnown RBP14.32□□□□□ -0.12
PCDH1-204ENST00000503492 Q8N377 158 aa14.32□□□□□ -0.12
PCDH1-204ENST00000503492 DEFB105AQ8NG35 78 aa14.32□□□□□ -0.12
PCDH1-204ENST00000503492 C14orf177Q52M58 125 aa14.31□□□□□ -0.12
PCDH1-204ENST00000503492 LINC01547P58512 204 aaPredicted RBP14.31□□□□□ -0.12
PCDH1-204ENST00000503492 HIST1H4AP62805 103 aaKnown RBP14.31□□□□□ -0.12
PCDH1-204ENST00000503492 A0A087WVE0 104 aa14.3□□□□□ -0.12
PCDH1-204ENST00000503492 A0A1W2PNN7 141 aa14.3□□□□□ -0.12
PCDH1-204ENST00000503492 ATP5EP2Q5VTU8 51 aa14.3□□□□□ -0.12
PCDH1-204ENST00000503492 LRCOL1A6NCL2 159 aa14.28□□□□□ -0.12
PCDH1-204ENST00000503492 REG3GQ6UW15 175 aa14.27□□□□□ -0.12
PCDH1-204ENST00000503492 TENM2Q9NT68 2774 aa14.27□□□□□ -0.12
PCDH1-204ENST00000503492 Q6ZVQ6 151 aa14.26□□□□□ -0.13
PCDH1-204ENST00000503492 PRKDCP78527 4128 aaKnown RBP14.26□□□□□ -0.13
PCDH1-204ENST00000503492 Q6ZRN7 208 aaPredicted RBP14.25□□□□□ -0.13
PCDH1-204ENST00000503492 ST20-AS1Q8NBB2 130 aa14.25□□□□□ -0.13
PCDH1-204ENST00000503492 ERC2-IT1O76042 136 aa14.24□□□□□ -0.13
PCDH1-204ENST00000503492 CHTF8P0CG12 524 aa14.22□□□□□ -0.13
PCDH1-204ENST00000503492 UBE2BP63146 152 aa14.22□□□□□ -0.13
PCDH1-204ENST00000503492 FAM19A1Q7Z5A9 133 aa14.22□□□□□ -0.13
PCDH1-204ENST00000503492 C3orf22Q8N5N4 141 aa14.22□□□□□ -0.13
PCDH1-204ENST00000503492 C9orf163Q8N9P6 203 aa14.21□□□□□ -0.13
PCDH1-204ENST00000503492 IGLV5-48A0A075B6I7 105 aa14.2□□□□□ -0.14
PCDH1-204ENST00000503492 STARD9Q9P2P6 4700 aa14.19□□□□□ -0.14
PCDH1-204ENST00000503492 HAMPP81172 84 aa14.19□□□□□ -0.14
PCDH1-204ENST00000503492 ATOX1O00244 68 aa14.18□□□□□ -0.14
PCDH1-204ENST00000503492 TNP2Q05952 138 aa14.15□□□□□ -0.14
PCDH1-204ENST00000503492 VPS13DQ5THJ4 4388 aa14.15□□□□□ -0.14
PCDH1-204ENST00000503492 PHF5AQ7RTV0 110 aaKnown RBP14.15□□□□□ -0.14
PCDH1-204ENST00000503492 PRLHP81277 87 aa14.14□□□□□ -0.15
PCDH1-204ENST00000503492 KRTAP11-1Q8IUC1 163 aa14.14□□□□□ -0.15
PCDH1-204ENST00000503492 CXCL6P80162 114 aa14.11□□□□□ -0.15
PCDH1-204ENST00000503492 MEGF8Q7Z7M0 2845 aa14.1□□□□□ -0.15
PCDH1-204ENST00000503492 DNHD1Q96M86 4753 aa14.1□□□□□ -0.15
PCDH1-204ENST00000503492 UQCRQO14949 82 aa14.1□□□□□ -0.15
PCDH1-204ENST00000503492 COX7CP15954 63 aa14.1□□□□□ -0.15
PCDH1-204ENST00000503492 PANO1I0J062 215 aa14.09□□□□□ -0.15
PCDH1-204ENST00000503492 PKIGQ9Y2B9 76 aa14.09□□□□□ -0.15
PCDH1-204ENST00000503492 SCXQ7RTU7 201 aa14.08□□□□□ -0.16
PCDH1-204ENST00000503492 SMIM29Q86T20 159 aa14.08□□□□□ -0.16
PCDH1-204ENST00000503492 C3orf84H3BNL1 204 aa14.08□□□□□ -0.16
PCDH1-204ENST00000503492 C1orf137Q5JT78 98 aa14.08□□□□□ -0.16
PCDH1-204ENST00000503492 A0A1W2PNM2 257 aa14.07□□□□□ -0.16
PCDH1-204ENST00000503492 HIGD2AQ9BW72 106 aa14.05□□□□□ -0.16
PCDH1-204ENST00000503492 LINC00474Q9P2X8 69 aa14.05□□□□□ -0.16
PCDH1-204ENST00000503492 A0A087WTM6 91 aa14.04□□□□□ -0.16
PCDH1-204ENST00000503492 NREPQ16612 68 aa14.03□□□□□ -0.16
PCDH1-204ENST00000503492 C9orf153Q5TBE3 101 aa14.03□□□□□ -0.16
PCDH1-204ENST00000503492 FUSP35637 526 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDH1-204ENST00000503492 Q6ZR54 194 aa14.03□□□□□ -0.16
PCDH1-204ENST00000503492 SERP2Q8N6R1 65 aa14.03□□□□□ -0.16
PCDH1-204ENST00000503492 SS18L2Q9UHA2 77 aa14.02□□□□□ -0.16
PCDH1-204ENST00000503492 Q8NBF4 154 aa14.01□□□□□ -0.17
PCDH1-204ENST00000503492 EPM2AB3EWF7 344 aa14□□□□□ -0.17
PCDH1-204ENST00000503492 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.99□□□□□ -0.17
PCDH1-204ENST00000503492 A0A1B0GW54 56 aa13.98□□□□□ -0.17
PCDH1-204ENST00000503492 H0Y9J4 135 aa13.98□□□□□ -0.17
PCDH1-204ENST00000503492 LINC00476Q8WZB0 136 aa13.98□□□□□ -0.17
PCDH1-204ENST00000503492 DPH3Q96FX2 82 aa13.98□□□□□ -0.17
PCDH1-204ENST00000503492 SPACA4Q8TDM5 124 aa13.97□□□□□ -0.17
PCDH1-204ENST00000503492 SPRR4Q96PI1 79 aa13.97□□□□□ -0.17
PCDH1-204ENST00000503492 F8WEM9 126 aa13.96□□□□□ -0.18
PCDH1-204ENST00000503492 CRYGAP11844 174 aa13.95□□□□□ -0.18
PCDH1-204ENST00000503492 KMT2AQ03164 3969 aa13.94□□□□□ -0.18
PCDH1-204ENST00000503492 A0A0G2JQZ4 141 aa13.94□□□□□ -0.18
PCDH1-204ENST00000503492 Q8N9L7 120 aa13.94□□□□□ -0.18
PCDH1-204ENST00000503492 UBE2AP49459 152 aa13.93□□□□□ -0.18
PCDH1-204ENST00000503492 BPY2O14599 106 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms