RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
SF3A1-210ENST00000498259 UBE2BP63146 152 aa5.4□□□□□ -1.54
SF3A1-210ENST00000498259 LINC00575Q6W349 94 aa5.4□□□□□ -1.54
SF3A1-210ENST00000498259 LINC01600Q96MT4 127 aa5.4□□□□□ -1.54
SF3A1-210ENST00000498259 LINC00167Q96N53 147 aa5.4□□□□□ -1.54
SF3A1-210ENST00000498259 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
SF3A1-210ENST00000498259 K7ERU9 68 aa5.39□□□□□ -1.55
SF3A1-210ENST00000498259 ELOF1P60002 83 aaKnown RBP5.39□□□□□ -1.55
SF3A1-210ENST00000498259 TNP2Q05952 138 aa5.39□□□□□ -1.55
SF3A1-210ENST00000498259 REG3GQ6UW15 175 aa5.39□□□□□ -1.55
SF3A1-210ENST00000498259 SPACA4Q8TDM5 124 aa5.39□□□□□ -1.55
SF3A1-210ENST00000498259 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
SF3A1-210ENST00000498259 RPL37AP8A6NKH3 93 aa5.38□□□□□ -1.55
SF3A1-210ENST00000498259 BAALC-AS2P0C853 105 aa5.38□□□□□ -1.55
SF3A1-210ENST00000498259 C21orf62-AS1Q17RA5 79 aa5.38□□□□□ -1.55
SF3A1-210ENST00000498259 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.38□□□□□ -1.55
SF3A1-210ENST00000498259 TEN1Q86WV5 123 aa5.38□□□□□ -1.55
SF3A1-210ENST00000498259 STARD9Q9P2P6 4700 aa5.38□□□□□ -1.55
SF3A1-210ENST00000498259 A0A087WYN8 130 aa5.37□□□□□ -1.55
SF3A1-210ENST00000498259 SPRR1AP35321 89 aa5.37□□□□□ -1.55
SF3A1-210ENST00000498259 PPDPFLQ8WWR9 84 aa5.37□□□□□ -1.55
SF3A1-210ENST00000498259 PRO0461Q9UI25 63 aa5.37□□□□□ -1.55
SF3A1-210ENST00000498259 PLECQ15149 4684 aaKnown RBP5.36□□□□□ -1.55
SF3A1-210ENST00000498259 LYSTQ99698 3801 aa5.36□□□□□ -1.55
SF3A1-210ENST00000498259 A0A1W2PNN7 141 aa5.36□□□□□ -1.55
SF3A1-210ENST00000498259 JMJD7-PLA2G4BH0Y9G9 81 aa5.36□□□□□ -1.55
SF3A1-210ENST00000498259 ETDBQ3ZM63 59 aa5.36□□□□□ -1.55
SF3A1-210ENST00000498259 Q6ZRX8 168 aa5.36□□□□□ -1.55
SF3A1-210ENST00000498259 FAM218AQ96MZ4 157 aa5.36□□□□□ -1.55
SF3A1-210ENST00000498259 VPS13DQ5THJ4 4388 aa5.35□□□□□ -1.55
SF3A1-210ENST00000498259 DNAH1Q9P2D7 4330 aa5.35□□□□□ -1.55
SF3A1-210ENST00000498259 EPM2AB3EWF7 344 aa5.35□□□□□ -1.55
SF3A1-210ENST00000498259 H0Y9J4 135 aa5.35□□□□□ -1.55
SF3A1-210ENST00000498259 CHTF8P0CG12 524 aa5.35□□□□□ -1.55
SF3A1-210ENST00000498259 B5MCH6 92 aa5.34□□□□□ -1.55
SF3A1-210ENST00000498259 MTURNQ8N3F0 131 aa5.34□□□□□ -1.55
SF3A1-210ENST00000498259 PLAC8Q9NZF1 115 aa5.34□□□□□ -1.55
SF3A1-210ENST00000498259 UBE2AP49459 152 aa5.33□□□□□ -1.56
SF3A1-210ENST00000498259 Q6ZQY7 126 aa5.33□□□□□ -1.56
SF3A1-210ENST00000498259 FAM19A1Q7Z5A9 133 aa5.33□□□□□ -1.56
SF3A1-210ENST00000498259 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
SF3A1-210ENST00000498259 KRTAP4-16G5E9R7 235 aaPredicted RBP5.32□□□□□ -1.56
SF3A1-210ENST00000498259 BCE1O60756 84 aa5.32□□□□□ -1.56
SF3A1-210ENST00000498259 PDE6GP18545 87 aa5.32□□□□□ -1.56
SF3A1-210ENST00000498259 PHF5AQ7RTV0 110 aaKnown RBP5.32□□□□□ -1.56
SF3A1-210ENST00000498259 LAMTOR3Q9UHA4 124 aa5.32□□□□□ -1.56
SF3A1-210ENST00000498259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.32□□□□□ -1.56
SF3A1-210ENST00000498259 ALMS1Q8TCU4 4167 aa5.31□□□□□ -1.56
SF3A1-210ENST00000498259 ACYP1P07311 99 aa5.3□□□□□ -1.56
SF3A1-210ENST00000498259 DSCR8Q96T75 97 aa5.3□□□□□ -1.56
SF3A1-210ENST00000498259 DNAH6Q9C0G6 4158 aa5.29□□□□□ -1.56
SF3A1-210ENST00000498259 TEX49A0A1B0GTD5 131 aa5.29□□□□□ -1.56
SF3A1-210ENST00000498259 KRTAP10-2P60368 255 aa5.29□□□□□ -1.56
SF3A1-210ENST00000498259 RBM3P98179 157 aaKnown RBP5.29□□□□□ -1.56
SF3A1-210ENST00000498259 ZNF706Q9Y5V0 76 aaPredicted RBP5.29□□□□□ -1.56
SF3A1-210ENST00000498259 F8WEM9 126 aa5.28□□□□□ -1.56
SF3A1-210ENST00000498259 Q6ZSA8 131 aa5.28□□□□□ -1.56
SF3A1-210ENST00000498259 HIGD2AQ9BW72 106 aa5.28□□□□□ -1.56
SF3A1-210ENST00000498259 FAM240AA0A1B0GVK7 77 aa5.27□□□□□ -1.57
SF3A1-210ENST00000498259 PANO1I0J062 215 aa5.27□□□□□ -1.57
SF3A1-210ENST00000498259 NDUFV3P56181 108 aaKnown RBP5.27□□□□□ -1.57
SF3A1-210ENST00000498259 OBSCN-AS1Q96MR7 158 aa5.27□□□□□ -1.57
SF3A1-210ENST00000498259 Q9BRP9 147 aa5.27□□□□□ -1.57
SF3A1-210ENST00000498259 KMT2AQ03164 3969 aa5.27□□□□□ -1.57
SF3A1-210ENST00000498259 IGLV5-48A0A075B6I7 105 aa5.26□□□□□ -1.57
SF3A1-210ENST00000498259 LCE2CQ5TA81 110 aa5.26□□□□□ -1.57
SF3A1-210ENST00000498259 DEFB105AQ8NG35 78 aa5.26□□□□□ -1.57
SF3A1-210ENST00000498259 SMCR5Q8TEV8 140 aa5.26□□□□□ -1.57
SF3A1-210ENST00000498259 FUSP35637 526 aaKnown RBP eCLIP5.25□□□□□ -1.57
SF3A1-210ENST00000498259 PRLHP81277 87 aa5.25□□□□□ -1.57
SF3A1-210ENST00000498259 C1orf137Q5JT78 98 aa5.25□□□□□ -1.57
SF3A1-210ENST00000498259 CIRBP-AS1Q8TBR5 109 aa5.25□□□□□ -1.57
SF3A1-210ENST00000498259 PSORS1C2Q9UIG4 136 aa5.25□□□□□ -1.57
SF3A1-210ENST00000498259 LOC110117498A0A087WWA1 95 aa5.24□□□□□ -1.57
SF3A1-210ENST00000498259 A0A1B0GW54 56 aa5.24□□□□□ -1.57
SF3A1-210ENST00000498259 ZNF861PO60384 105 aa5.24□□□□□ -1.57
SF3A1-210ENST00000498259 KRTAP10-1P60331 282 aa5.24□□□□□ -1.57
SF3A1-210ENST00000498259 SCXQ7RTU7 201 aa5.24□□□□□ -1.57
SF3A1-210ENST00000498259 DNAH10Q8IVF4 4471 aa5.23□□□□□ -1.57
SF3A1-210ENST00000498259 CCKP06307 115 aa5.23□□□□□ -1.57
SF3A1-210ENST00000498259 Q8N377 158 aa5.23□□□□□ -1.57
SF3A1-210ENST00000498259 VPS25Q9BRG1 176 aa5.23□□□□□ -1.57
SF3A1-210ENST00000498259 C14orf132Q9NPU4 83 aa5.23□□□□□ -1.57
SF3A1-210ENST00000498259 GAGE2AQ6NT46 116 aa5.22□□□□□ -1.57
SF3A1-210ENST00000498259 IGLV7-43P04211 117 aa5.21□□□□□ -1.58
SF3A1-210ENST00000498259 SPRR1BP22528 89 aa5.21□□□□□ -1.58
SF3A1-210ENST00000498259 Q6JHZ5 121 aa5.21□□□□□ -1.58
SF3A1-210ENST00000498259 KRTAP13-1Q8IUC0 172 aa5.21□□□□□ -1.58
SF3A1-210ENST00000498259 FAM30AQ9NZY2 134 aa5.21□□□□□ -1.58
SF3A1-210ENST00000498259 A0A1B0GVY2 172 aa5.2□□□□□ -1.58
SF3A1-210ENST00000498259 ERC2-IT1O76042 136 aa5.2□□□□□ -1.58
SF3A1-210ENST00000498259 RPL37AP61513 92 aaKnown RBP5.2□□□□□ -1.58
SF3A1-210ENST00000498259 KRTAP11-1Q8IUC1 163 aa5.2□□□□□ -1.58
SF3A1-210ENST00000498259 ST20-AS1Q8NBB2 130 aa5.2□□□□□ -1.58
SF3A1-210ENST00000498259 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
SF3A1-210ENST00000498259 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
SF3A1-210ENST00000498259 Q6ZQT0 140 aa5.19□□□□□ -1.58
SF3A1-210ENST00000498259 UBL5Q9BZL1 73 aa5.19□□□□□ -1.58
SF3A1-210ENST00000498259 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
SF3A1-210ENST00000498259 DNAH2Q9P225 4427 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms