RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 C6orf226Q5I0X4 101 aa2.94□□□□□ -1.94
SSR3-209ENST00000498205 DEFB104AQ8WTQ1 72 aa2.94□□□□□ -1.94
SSR3-209ENST00000498205 ORMDL1Q9P0S3 153 aa2.94□□□□□ -1.94
SSR3-209ENST00000498205 NIPBLQ6KC79 2804 aaeCLIP2.94□□□□□ -1.94
SSR3-209ENST00000498205 IGLV4-60A0A075B6I1 120 aa2.93□□□□□ -1.94
SSR3-209ENST00000498205 LOC110117498A0A087WWA1 95 aa2.93□□□□□ -1.94
SSR3-209ENST00000498205 A0A1B0GW54 56 aa2.93□□□□□ -1.94
SSR3-209ENST00000498205 PRM2P04554 102 aa2.93□□□□□ -1.94
SSR3-209ENST00000498205 CCKP06307 115 aa2.93□□□□□ -1.94
SSR3-209ENST00000498205 MIFP14174 115 aa2.93□□□□□ -1.94
SSR3-209ENST00000498205 COX7CP15954 63 aa2.93□□□□□ -1.94
SSR3-209ENST00000498205 LINC00158P58513 81 aa2.93□□□□□ -1.94
SSR3-209ENST00000498205 C3orf22Q8N5N4 141 aa2.93□□□□□ -1.94
SSR3-209ENST00000498205 PDZD2O15018 2839 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 FAM236AA0A1B0GUQ0 79 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 FAM236BA0A1B0GV22 79 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 NDUFC2-KCTD14E9PQ53 114 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 NPC2P61916 151 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 RPL18AQ02543 176 aaKnown RBP2.92□□□□□ -1.94
SSR3-209ENST00000498205 LELP1Q5T871 98 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 SMIM20Q8N5G0 67 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 Q8N814 137 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 WFDC9Q8NEX5 89 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 WFDC11Q8NEX6 87 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 SMCR5Q8TEV8 140 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
SSR3-209ENST00000498205 hADV29S1A0JD25 119 aa2.91□□□□□ -1.94
SSR3-209ENST00000498205 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
SSR3-209ENST00000498205 IGLV6-57P01721 117 aa2.91□□□□□ -1.94
SSR3-209ENST00000498205 SERP2Q8N6R1 65 aa2.91□□□□□ -1.94
SSR3-209ENST00000498205 NKAPP1Q8N9T2 125 aa2.91□□□□□ -1.94
SSR3-209ENST00000498205 ATRQ13535 2644 aa2.91□□□□□ -1.94
SSR3-209ENST00000498205 ZNF469Q96JG9 3925 aaPredicted RBP2.9□□□□□ -1.94
SSR3-209ENST00000498205 LECT2O14960 151 aa2.9□□□□□ -1.95
SSR3-209ENST00000498205 TMEM258P61165 79 aa2.9□□□□□ -1.95
SSR3-209ENST00000498205 REG3AQ06141 175 aa2.9□□□□□ -1.95
SSR3-209ENST00000498205 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.9□□□□□ -1.95
SSR3-209ENST00000498205 LINC00575Q6W349 94 aa2.9□□□□□ -1.95
SSR3-209ENST00000498205 C6orf223Q8N319 242 aa2.9□□□□□ -1.95
SSR3-209ENST00000498205 CHCHD10Q8WYQ3 142 aaPredicted RBP2.9□□□□□ -1.95
SSR3-209ENST00000498205 TOMM7Q9P0U1 55 aa2.9□□□□□ -1.95
SSR3-209ENST00000498205 CSMD2Q7Z408 3487 aa2.9□□□□□ -1.95
SSR3-209ENST00000498205 ANK3Q12955 4377 aaKnown RBP2.89□□□□□ -1.95
SSR3-209ENST00000498205 IGKV2D-24A0A075B6R9 120 aa2.89□□□□□ -1.95
SSR3-209ENST00000498205 SPART-AS1P0CW21 52 aa2.89□□□□□ -1.95
SSR3-209ENST00000498205 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
SSR3-209ENST00000498205 Q8NAQ8 132 aa2.89□□□□□ -1.95
SSR3-209ENST00000498205 UBL5Q9BZL1 73 aa2.89□□□□□ -1.95
SSR3-209ENST00000498205 LINC00846Q9NV44 126 aa2.89□□□□□ -1.95
SSR3-209ENST00000498205 TENM4Q6N022 2769 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 NBPF19A0A087WUL8 3843 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 LOC107984640A0A0U1RRK4 108 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 DEFB130BP0DP73 79 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 DEFB130AP0DP74 79 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 PFN2P35080 140 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 XCL1P47992 114 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 DAD1P61803 113 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 RBM3P98179 157 aaKnown RBP2.88□□□□□ -1.95
SSR3-209ENST00000498205 C9orf153Q5TBE3 101 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 Q6ZQT0 140 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 LINC00269Q8N2A0 174 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 OR13C6PQ8NH95 151 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 WFDC10AQ9H1F0 79 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 C11orf68Q9H3H3 251 aaKnown RBP2.88□□□□□ -1.95
SSR3-209ENST00000498205 C14orf132Q9NPU4 83 aa2.88□□□□□ -1.95
SSR3-209ENST00000498205 NBEAL2Q6ZNJ1 2754 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 VWFP04275 2813 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.87□□□□□ -1.95
SSR3-209ENST00000498205 TRBV7-4A0A0J9YYF1 115 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 J3KT08 172 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 J3QKU1 62 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 ERC2-IT1O76042 136 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 PRB1P04280 392 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 ELOF1P60002 83 aaKnown RBP2.87□□□□□ -1.95
SSR3-209ENST00000498205 SPAG11BQ08648 103 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 UPK3BQ9BT76 320 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 SS18L2Q9UHA2 77 aa2.87□□□□□ -1.95
SSR3-209ENST00000498205 NDUFC1O43677 76 aa2.86□□□□□ -1.95
SSR3-209ENST00000498205 ANGP03950 147 aaKnown RBP2.86□□□□□ -1.95
SSR3-209ENST00000498205 TLX1NBP0CAT3 122 aa2.86□□□□□ -1.95
SSR3-209ENST00000498205 KLKP1Q107X0 134 aa2.86□□□□□ -1.95
SSR3-209ENST00000498205 C6orf99Q4VX62 202 aa2.86□□□□□ -1.95
SSR3-209ENST00000498205 DIRC1Q969H9 104 aa2.86□□□□□ -1.95
SSR3-209ENST00000498205 HIVEP1P15822 2718 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 TRAV7A0A075B6U4 112 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 TRAV23DV6A0A075B6W5 121 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 A0A096LPF7 62 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 IGKV3OR2-268A0A0C4DH90 116 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 KRTAP4-16G5E9R7 235 aaPredicted RBP2.85□□□□□ -1.95
SSR3-209ENST00000498205 M0R378 163 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 NCR3O14931 201 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 ZNF73O43830 326 aaPredicted RBP2.85□□□□□ -1.95
SSR3-209ENST00000498205 ATP5EP56381 51 aaPredicted RBP2.85□□□□□ -1.95
SSR3-209ENST00000498205 LINC01556Q5JQF7 62 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 KRTAP26-1Q6PEX3 210 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 DSCR8Q96T75 97 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 TENM1Q9UKZ4 2725 aa2.85□□□□□ -1.95
SSR3-209ENST00000498205 DEFB135Q30KP9 77 aa2.84□□□□□ -1.95
SSR3-209ENST00000498205 ENHOQ6UWT2 76 aa2.84□□□□□ -1.95
SSR3-209ENST00000498205 UNQ6190/PRO20217Q6UXQ8 127 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms