RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 NFAT5O94916 1531 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 LRRC7Q96NW7 1537 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 MYOM1P52179 1685 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 PEG3Q9GZU2 1588 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 CFTRP13569 1480 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 GAPVD1Q14C86 1478 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 PIGBOS1A0A0B4J2F0 54 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 IGLC7A0M8Q6 106 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 SPART-AS1P0CW21 52 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 HMGA1P17096 107 aaKnown RBP-0.9□□□□□ -2.55
SMC4-227ENST00000497984 SERP1Q9Y6X1 66 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 LINC01558Q9Y6Z2 57 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 CEP152O94986 1710 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 SCRIBQ14160 1630 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 EHBP1L1Q8N3D4 1523 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 NSD3Q9BZ95 1437 aa-0.9□□□□□ -2.55
SMC4-227ENST00000497984 ANKRD36CQ5JPF3 1778 aa-0.91□□□□□ -2.55
SMC4-227ENST00000497984 DNMBPQ6XZF7 1577 aa-0.91□□□□□ -2.55
SMC4-227ENST00000497984 SPHKAPQ2M3C7 1700 aa-0.91□□□□□ -2.55
SMC4-227ENST00000497984 NALCNQ8IZF0 1738 aa-0.91□□□□□ -2.55
SMC4-227ENST00000497984 IFNGP01579 166 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 MT-ATP8P03928 68 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 COX8AP10176 69 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 CD52P31358 61 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 TPPP2P59282 170 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 ARPC4P59998 168 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 WFDC13Q8IUB5 93 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 MGST2Q99735 147 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 RERGLQ9H628 205 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 DYNLRB1Q9NP97 96 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 CCDC180Q9P1Z9 1646 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 MYH13Q9UKX3 1938 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 TIAM1Q13009 1591 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 DIP2CQ9Y2E4 1556 aa-0.91□□□□□ -2.56
SMC4-227ENST00000497984 SPEF2Q9C093 1822 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 QSER1Q2KHR3 1735 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 RGPD4Q7Z3J3 1758 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 NEXMIFQ5QGS0 1516 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 MAGI3Q5TCQ9 1506 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 TRBV7-3A0A075B6L6 115 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 SYS1-DBNDD2H3BUS1 97 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 HMGN4O00479 90 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 APOC3P02656 99 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 FGF7P21781 194 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 UBE2D3P61077 147 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 COPS9Q8WXC6 57 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 PP6455Q8WZ26 134 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 PFDN5Q99471 154 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 DOCK2Q92608 1830 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 RGPD1P0DJD0 1748 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 NWD2Q9ULI1 1742 aa-0.92□□□□□ -2.56
SMC4-227ENST00000497984 POLA1P09884 1462 aaPredicted RBP-0.92□□□□□ -2.56
SMC4-227ENST00000497984 KIF21BO75037 1637 aa-0.93□□□□□ -2.56
SMC4-227ENST00000497984 TFF3Q07654 80 aa-0.93□□□□□ -2.56
SMC4-227ENST00000497984 C5orf38Q86SI9 138 aa-0.93□□□□□ -2.56
SMC4-227ENST00000497984 SNRNP25Q9BV90 132 aaKnown RBP-0.93□□□□□ -2.56
SMC4-227ENST00000497984 NAA60Q9H7X0 242 aa-0.93□□□□□ -2.56
SMC4-227ENST00000497984 DEPDC5O75140 1603 aa-0.93□□□□□ -2.56
SMC4-227ENST00000497984 RAPGEF6Q8TEU7 1601 aa-0.93□□□□□ -2.56
SMC4-227ENST00000497984 NUP188Q5SRE5 1749 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 MON2Q7Z3U7 1717 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 IGLV5-48A0A075B6I7 105 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 TRBV7-4A0A0J9YYF1 115 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 FAM223BA6NKX1 122 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 H7BZZ5 65 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 UBA52P62987 128 aaKnown RBP-0.94□□□□□ -2.56
SMC4-227ENST00000497984 DEFB133Q30KQ1 61 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 RPS27LQ71UM5 84 aaKnown RBP-0.94□□□□□ -2.56
SMC4-227ENST00000497984 USMG5Q96IX5 58 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 ANKRD36A6QL64 1941 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 PLEKHH2Q8IVE3 1493 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 SHPRHQ149N8 1683 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 KIF21AQ7Z4S6 1674 aa-0.94□□□□□ -2.56
SMC4-227ENST00000497984 PDCD11Q14690 1871 aaKnown RBP-0.95□□□□□ -2.56
SMC4-227ENST00000497984 A0A0G2JMZ2 1700 aa-0.95□□□□□ -2.56
SMC4-227ENST00000497984 LRRC37AA6NMS7 1700 aa-0.95□□□□□ -2.56
SMC4-227ENST00000497984 XRN1Q8IZH2 1706 aaKnown RBP-0.95□□□□□ -2.56
SMC4-227ENST00000497984 ABCA3Q99758 1704 aa-0.95□□□□□ -2.56
SMC4-227ENST00000497984 MAP3K4Q9Y6R4 1608 aa-0.95□□□□□ -2.56
SMC4-227ENST00000497984 SFT2D2O95562 160 aa-0.95□□□□□ -2.56
SMC4-227ENST00000497984 UBE2D2P62837 147 aa-0.95□□□□□ -2.56
SMC4-227ENST00000497984 CD163L1Q9NR16 1453 aa-0.95□□□□□ -2.56
SMC4-227ENST00000497984 WIZO95785 1651 aa-0.95□□□□□ -2.56
SMC4-227ENST00000497984 ALS2Q96Q42 1657 aa-0.95□□□□□ -2.56
SMC4-227ENST00000497984 KIF20BQ96Q89 1820 aa-0.96□□□□□ -2.56
SMC4-227ENST00000497984 CPSF4LA6NMK7 179 aaKnown RBP-0.96□□□□□ -2.56
SMC4-227ENST00000497984 K7EP13 123 aa-0.96□□□□□ -2.56
SMC4-227ENST00000497984 MEIG1Q5JSS6 88 aa-0.96□□□□□ -2.56
SMC4-227ENST00000497984 C6orf201Q7Z4U5 140 aa-0.96□□□□□ -2.56
SMC4-227ENST00000497984 FAM223AQ8IWN6 122 aa-0.96□□□□□ -2.56
SMC4-227ENST00000497984 MRPL34Q9BQ48 92 aaKnown RBP-0.96□□□□□ -2.56
SMC4-227ENST00000497984 SPANXDQ9BXN6 97 aa-0.96□□□□□ -2.56
SMC4-227ENST00000497984 MYH6P13533 1939 aa-0.96□□□□□ -2.56
SMC4-227ENST00000497984 LRRIQ1Q96JM4 1722 aa-0.96□□□□□ -2.56
SMC4-227ENST00000497984 KIAA1551Q9HCM1 1747 aa-0.96□□□□□ -2.56
SMC4-227ENST00000497984 THOC2Q8NI27 1593 aaKnown RBP-0.96□□□□□ -2.56
SMC4-227ENST00000497984 CPSF1Q10570 1443 aaKnown RBP-0.97□□□□□ -2.56
SMC4-227ENST00000497984 SCAPERQ9BY12 1400 aa-0.97□□□□□ -2.56
SMC4-227ENST00000497984 MIF4GDA9UHW6 222 aaKnown RBP-0.97□□□□□ -2.56
SMC4-227ENST00000497984 GNG7O60262 68 aa-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms