RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 LINC00308Q8TCZ7 52 aa6.28□□□□□ -1.4
RAB11FIP3-211ENST00000495663 M0R378 163 aa6.27□□□□□ -1.41
RAB11FIP3-211ENST00000495663 NDUFC2O95298 119 aa6.27□□□□□ -1.41
RAB11FIP3-211ENST00000495663 SMIM6P0DI80 62 aa6.27□□□□□ -1.41
RAB11FIP3-211ENST00000495663 IFITM1P13164 125 aa6.27□□□□□ -1.41
RAB11FIP3-211ENST00000495663 SRSF9Q13242 221 aaKnown RBP eCLIP6.27□□□□□ -1.41
RAB11FIP3-211ENST00000495663 LINC00167Q96N53 147 aa6.27□□□□□ -1.41
RAB11FIP3-211ENST00000495663 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
RAB11FIP3-211ENST00000495663 GAGE10A6NGK3 116 aa6.26□□□□□ -1.41
RAB11FIP3-211ENST00000495663 NCR3O14931 201 aa6.26□□□□□ -1.41
RAB11FIP3-211ENST00000495663 PPDPFQ9H3Y8 114 aa6.26□□□□□ -1.41
RAB11FIP3-211ENST00000495663 TRBV10-2A0A0K0K1G8 114 aa6.25□□□□□ -1.41
RAB11FIP3-211ENST00000495663 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
RAB11FIP3-211ENST00000495663 PRR3P79522 188 aaKnown RBP6.25□□□□□ -1.41
RAB11FIP3-211ENST00000495663 MUSTN1Q8IVN3 82 aa6.25□□□□□ -1.41
RAB11FIP3-211ENST00000495663 PSORS1C2Q9UIG4 136 aa6.25□□□□□ -1.41
RAB11FIP3-211ENST00000495663 IGKV2-28A0A075B6P5 120 aa6.24□□□□□ -1.41
RAB11FIP3-211ENST00000495663 IGKV2D-28P01615 120 aa6.24□□□□□ -1.41
RAB11FIP3-211ENST00000495663 KRTAP11-1Q8IUC1 163 aa6.24□□□□□ -1.41
RAB11FIP3-211ENST00000495663 HIST1H4GQ99525 98 aa6.24□□□□□ -1.41
RAB11FIP3-211ENST00000495663 HIGD1BQ9P298 99 aa6.24□□□□□ -1.41
RAB11FIP3-211ENST00000495663 IGLV1-50A0A075B6I6 118 aa6.23□□□□□ -1.41
RAB11FIP3-211ENST00000495663 C1orf137Q5JT78 98 aa6.23□□□□□ -1.41
RAB11FIP3-211ENST00000495663 LINC00518Q8N0U6 118 aa6.23□□□□□ -1.41
RAB11FIP3-211ENST00000495663 FAT1Q14517 4588 aa6.23□□□□□ -1.41
RAB11FIP3-211ENST00000495663 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
RAB11FIP3-211ENST00000495663 S100A7L2Q5SY68 101 aa6.22□□□□□ -1.41
RAB11FIP3-211ENST00000495663 C2orf91Q6ZV80 131 aa6.22□□□□□ -1.41
RAB11FIP3-211ENST00000495663 UQCR10Q9UDW1 63 aa6.22□□□□□ -1.41
RAB11FIP3-211ENST00000495663 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
RAB11FIP3-211ENST00000495663 TRBV10-3A0A0K0K1G6 114 aa6.21□□□□□ -1.42
RAB11FIP3-211ENST00000495663 DDTP30046 118 aa6.21□□□□□ -1.42
RAB11FIP3-211ENST00000495663 KRTAP5-11Q6L8G4 156 aa6.21□□□□□ -1.42
RAB11FIP3-211ENST00000495663 PRYO14603 147 aa6.2□□□□□ -1.42
RAB11FIP3-211ENST00000495663 TAL2Q16559 108 aa6.2□□□□□ -1.42
RAB11FIP3-211ENST00000495663 REG3GQ6UW15 175 aa6.2□□□□□ -1.42
RAB11FIP3-211ENST00000495663 OR13C6PQ8NH95 151 aa6.2□□□□□ -1.42
RAB11FIP3-211ENST00000495663 C12orf57Q99622 126 aa6.2□□□□□ -1.42
RAB11FIP3-211ENST00000495663 TMEM126AQ9H061 195 aa6.2□□□□□ -1.42
RAB11FIP3-211ENST00000495663 CBY1Q9Y3M2 126 aa6.2□□□□□ -1.42
RAB11FIP3-211ENST00000495663 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
RAB11FIP3-211ENST00000495663 A4D1N5 150 aa6.19□□□□□ -1.42
RAB11FIP3-211ENST00000495663 BCE1O60756 84 aa6.19□□□□□ -1.42
RAB11FIP3-211ENST00000495663 IGLV6-57P01721 117 aa6.19□□□□□ -1.42
RAB11FIP3-211ENST00000495663 IGLV7-43P04211 117 aa6.19□□□□□ -1.42
RAB11FIP3-211ENST00000495663 PRO1933Q9H354 126 aa6.19□□□□□ -1.42
RAB11FIP3-211ENST00000495663 KCNQ1DNQ9H478 68 aa6.19□□□□□ -1.42
RAB11FIP3-211ENST00000495663 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
RAB11FIP3-211ENST00000495663 LINC00337Q8N6G1 96 aa6.18□□□□□ -1.42
RAB11FIP3-211ENST00000495663 TRAV23DV6A0A075B6W5 121 aa6.17□□□□□ -1.42
RAB11FIP3-211ENST00000495663 TRAV13-2A0A0B4J235 113 aa6.17□□□□□ -1.42
RAB11FIP3-211ENST00000495663 A6NDN8 102 aa6.17□□□□□ -1.42
RAB11FIP3-211ENST00000495663 HSD52Q0P140 79 aa6.17□□□□□ -1.42
RAB11FIP3-211ENST00000495663 FAM19A1Q7Z5A9 133 aa6.17□□□□□ -1.42
RAB11FIP3-211ENST00000495663 CEND1Q8N111 149 aa6.17□□□□□ -1.42
RAB11FIP3-211ENST00000495663 TSTD3H0UI37 97 aa6.16□□□□□ -1.42
RAB11FIP3-211ENST00000495663 INAFM2P0DMQ5 153 aa6.16□□□□□ -1.42
RAB11FIP3-211ENST00000495663 SPRR1AP35321 89 aa6.16□□□□□ -1.42
RAB11FIP3-211ENST00000495663 RPL28P46779 137 aaKnown RBP6.16□□□□□ -1.42
RAB11FIP3-211ENST00000495663 UBE2AP49459 152 aa6.16□□□□□ -1.42
RAB11FIP3-211ENST00000495663 SPINK6Q6UWN8 80 aa6.16□□□□□ -1.42
RAB11FIP3-211ENST00000495663 HERC1Q15751 4861 aa6.16□□□□□ -1.42
RAB11FIP3-211ENST00000495663 ETDCA0A1B0GVM5 59 aa6.15□□□□□ -1.42
RAB11FIP3-211ENST00000495663 ZNF861PO60384 105 aa6.15□□□□□ -1.42
RAB11FIP3-211ENST00000495663 ZNF73O43830 326 aaPredicted RBP6.14□□□□□ -1.43
RAB11FIP3-211ENST00000495663 HINT1P49773 126 aaPredicted RBP6.14□□□□□ -1.43
RAB11FIP3-211ENST00000495663 PRLHP81277 87 aa6.14□□□□□ -1.43
RAB11FIP3-211ENST00000495663 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.14□□□□□ -1.43
RAB11FIP3-211ENST00000495663 DIRC1Q969H9 104 aa6.14□□□□□ -1.43
RAB11FIP3-211ENST00000495663 KRTAP4-16G5E9R7 235 aaPredicted RBP6.13□□□□□ -1.43
RAB11FIP3-211ENST00000495663 H0Y9J4 135 aa6.13□□□□□ -1.43
RAB11FIP3-211ENST00000495663 CFC1BP0CG36 223 aa6.13□□□□□ -1.43
RAB11FIP3-211ENST00000495663 CFC1P0CG37 223 aa6.13□□□□□ -1.43
RAB11FIP3-211ENST00000495663 FXYD2P54710 66 aa6.13□□□□□ -1.43
RAB11FIP3-211ENST00000495663 KRTAP13-1Q8IUC0 172 aa6.13□□□□□ -1.43
RAB11FIP3-211ENST00000495663 RAB37Q96AX2 223 aa6.13□□□□□ -1.43
RAB11FIP3-211ENST00000495663 A0A0B4J2C4 111 aa6.12□□□□□ -1.43
RAB11FIP3-211ENST00000495663 RPL13AP40429 203 aaKnown RBP6.12□□□□□ -1.43
RAB11FIP3-211ENST00000495663 C6orf99Q4VX62 202 aa6.12□□□□□ -1.43
RAB11FIP3-211ENST00000495663 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
RAB11FIP3-211ENST00000495663 Q6ZRX8 168 aa6.11□□□□□ -1.43
RAB11FIP3-211ENST00000495663 SMIM11BQ8TCY0 68 aa6.11□□□□□ -1.43
RAB11FIP3-211ENST00000495663 HIGD2AQ9BW72 106 aa6.11□□□□□ -1.43
RAB11FIP3-211ENST00000495663 CTAG1AP78358 180 aa6.1□□□□□ -1.43
RAB11FIP3-211ENST00000495663 NHP2Q9NX24 153 aaKnown RBP6.1□□□□□ -1.43
RAB11FIP3-211ENST00000495663 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
RAB11FIP3-211ENST00000495663 TRBV7-6A0A0J9YX20 115 aa6.09□□□□□ -1.43
RAB11FIP3-211ENST00000495663 COX7BP24311 80 aa6.09□□□□□ -1.43
RAB11FIP3-211ENST00000495663 ELOF1P60002 83 aaKnown RBP6.09□□□□□ -1.43
RAB11FIP3-211ENST00000495663 PRO1854Q9UHT4 67 aa6.09□□□□□ -1.43
RAB11FIP3-211ENST00000495663 A0A1B0GWB2 263 aa6.08□□□□□ -1.44
RAB11FIP3-211ENST00000495663 H7C2G1 150 aa6.08□□□□□ -1.44
RAB11FIP3-211ENST00000495663 M0R143 59 aa6.08□□□□□ -1.44
RAB11FIP3-211ENST00000495663 VAMP3Q15836 100 aa6.08□□□□□ -1.44
RAB11FIP3-211ENST00000495663 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
RAB11FIP3-211ENST00000495663 Q1RN00 199 aa6.07□□□□□ -1.44
RAB11FIP3-211ENST00000495663 SMCR5Q8TEV8 140 aa6.07□□□□□ -1.44
RAB11FIP3-211ENST00000495663 Q9BRP9 147 aa6.07□□□□□ -1.44
RAB11FIP3-211ENST00000495663 OXTP01178 125 aa6.06□□□□□ -1.44
RAB11FIP3-211ENST00000495663 DHRS4-AS1Q9P1J3 65 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms