RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 COX6B2Q6YFQ2 88 aa7.71□□□□□ -1.18
VARS-228ENST00000495010 ZNF73O43830 326 aaPredicted RBP7.7□□□□□ -1.18
VARS-228ENST00000495010 CHCHD1Q96BP2 118 aaKnown RBP7.7□□□□□ -1.18
VARS-228ENST00000495010 H0Y8G0 127 aa7.69□□□□□ -1.18
VARS-228ENST00000495010 LEPROTO15243 131 aa7.69□□□□□ -1.18
VARS-228ENST00000495010 NDUFC2O95298 119 aa7.69□□□□□ -1.18
VARS-228ENST00000495010 CBY1Q9Y3M2 126 aa7.69□□□□□ -1.18
VARS-228ENST00000495010 LAMTOR3Q9UHA4 124 aa7.68□□□□□ -1.18
VARS-228ENST00000495010 TSPEAR-AS2P59090 65 aa7.67□□□□□ -1.18
VARS-228ENST00000495010 SLC7A5P1Q8MH63 180 aa7.67□□□□□ -1.18
VARS-228ENST00000495010 J3QQQ9 107 aa7.66□□□□□ -1.18
VARS-228ENST00000495010 C10orf91Q5T1B1 145 aa7.66□□□□□ -1.18
VARS-228ENST00000495010 LGALS3P17931 250 aaKnown RBP7.65□□□□□ -1.18
VARS-228ENST00000495010 NMUP48645 174 aa7.65□□□□□ -1.18
VARS-228ENST00000495010 HERVK_113P61574 105 aa7.65□□□□□ -1.18
VARS-228ENST00000495010 NPC2P61916 151 aa7.65□□□□□ -1.18
VARS-228ENST00000495010 SVBPQ8N300 66 aa7.65□□□□□ -1.18
VARS-228ENST00000495010 HSBP1O75506 76 aa7.64□□□□□ -1.19
VARS-228ENST00000495010 SPRR1BP22528 89 aa7.64□□□□□ -1.19
VARS-228ENST00000495010 DHRS4-AS1Q9P1J3 65 aa7.64□□□□□ -1.19
VARS-228ENST00000495010 SNAPINO95295 136 aa7.63□□□□□ -1.19
VARS-228ENST00000495010 APOC3P02656 99 aa7.63□□□□□ -1.19
VARS-228ENST00000495010 PLNP26678 52 aa7.63□□□□□ -1.19
VARS-228ENST00000495010 CD164Q04900 197 aa7.62□□□□□ -1.19
VARS-228ENST00000495010 OR13C6PQ8NH95 151 aa7.62□□□□□ -1.19
VARS-228ENST00000495010 H7C2G1 150 aa7.61□□□□□ -1.19
VARS-228ENST00000495010 PRO1933Q9H354 126 aa7.61□□□□□ -1.19
VARS-228ENST00000495010 S100A1P23297 94 aa7.6□□□□□ -1.19
VARS-228ENST00000495010 RPL37P61927 97 aaKnown RBP7.6□□□□□ -1.19
VARS-228ENST00000495010 TAL2Q16559 108 aa7.6□□□□□ -1.19
VARS-228ENST00000495010 SOSTDC1Q6X4U4 206 aa7.6□□□□□ -1.19
VARS-228ENST00000495010 DPM2O94777 84 aa7.59□□□□□ -1.19
VARS-228ENST00000495010 LEPROTL1O95214 131 aa7.59□□□□□ -1.19
VARS-228ENST00000495010 Q1RN00 199 aa7.59□□□□□ -1.19
VARS-228ENST00000495010 DEFB105AQ8NG35 78 aa7.59□□□□□ -1.19
VARS-228ENST00000495010 A0A0J9YXY3 114 aa7.57□□□□□ -1.2
VARS-228ENST00000495010 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
VARS-228ENST00000495010 AKR1D1P51857 326 aa7.57□□□□□ -1.2
VARS-228ENST00000495010 ADAMTSL4-AS1Q5T5F5 129 aa7.57□□□□□ -1.2
VARS-228ENST00000495010 IGKCP01834 107 aa7.56□□□□□ -1.2
VARS-228ENST00000495010 COX7BP24311 80 aa7.56□□□□□ -1.2
VARS-228ENST00000495010 C1orf195Q5TG92 126 aa7.56□□□□□ -1.2
VARS-228ENST00000495010 Q5XG85 94 aa7.56□□□□□ -1.2
VARS-228ENST00000495010 SPANXCQ9NY87 97 aa7.56□□□□□ -1.2
VARS-228ENST00000495010 TEX49A0A1B0GTD5 131 aa7.55□□□□□ -1.2
VARS-228ENST00000495010 PMCHL2Q9BQD1 86 aa7.55□□□□□ -1.2
VARS-228ENST00000495010 HSPB8Q9UJY1 196 aa7.55□□□□□ -1.2
VARS-228ENST00000495010 KRTAP9-7A8MTY7 169 aa7.54□□□□□ -1.2
VARS-228ENST00000495010 Q6Q795 121 aa7.54□□□□□ -1.2
VARS-228ENST00000495010 ELOF1P60002 83 aaKnown RBP7.53□□□□□ -1.2
VARS-228ENST00000495010 LINC00308Q8TCZ7 52 aa7.53□□□□□ -1.2
VARS-228ENST00000495010 SPANXDQ9BXN6 97 aa7.53□□□□□ -1.2
VARS-228ENST00000495010 FABP4P15090 132 aa7.52□□□□□ -1.21
VARS-228ENST00000495010 C6orf99Q4VX62 202 aa7.52□□□□□ -1.21
VARS-228ENST00000495010 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.51□□□□□ -1.21
VARS-228ENST00000495010 SMIM29Q86T20 159 aa7.51□□□□□ -1.21
VARS-228ENST00000495010 SERF1AO75920 110 aa7.5□□□□□ -1.21
VARS-228ENST00000495010 TCL1BO95988 128 aa7.5□□□□□ -1.21
VARS-228ENST00000495010 E9PLD3 99 aa7.49□□□□□ -1.21
VARS-228ENST00000495010 LINC00518Q8N0U6 118 aa7.49□□□□□ -1.21
VARS-228ENST00000495010 YPEL4Q96NS1 127 aa7.48□□□□□ -1.21
VARS-228ENST00000495010 A0A0G2JQZ4 141 aa7.47□□□□□ -1.21
VARS-228ENST00000495010 TIMM17BO60830 172 aa7.46□□□□□ -1.22
VARS-228ENST00000495010 ATP11AUNQ6ZP68 121 aa7.46□□□□□ -1.22
VARS-228ENST00000495010 LITAFQ99732 161 aa7.46□□□□□ -1.22
VARS-228ENST00000495010 FLGP20930 4061 aaPredicted RBP7.46□□□□□ -1.22
VARS-228ENST00000495010 TRBV7-6A0A0J9YX20 115 aa7.45□□□□□ -1.22
VARS-228ENST00000495010 TRGC2P03986 189 aa7.45□□□□□ -1.22
VARS-228ENST00000495010 CFC1P0CG37 223 aa7.45□□□□□ -1.22
VARS-228ENST00000495010 A0A1B0GWB2 263 aa7.44□□□□□ -1.22
VARS-228ENST00000495010 LINC00310P59036 64 aa7.44□□□□□ -1.22
VARS-228ENST00000495010 PCP2Q8IVA1 136 aa7.44□□□□□ -1.22
VARS-228ENST00000495010 IGLV5-48A0A075B6I7 105 aa7.43□□□□□ -1.22
VARS-228ENST00000495010 ZNF815PA8K554 130 aa7.42□□□□□ -1.22
VARS-228ENST00000495010 F8WEM9 126 aa7.41□□□□□ -1.22
VARS-228ENST00000495010 A6NDN8 102 aa7.4□□□□□ -1.22
VARS-228ENST00000495010 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
VARS-228ENST00000495010 A4D1N5 150 aa7.39□□□□□ -1.23
VARS-228ENST00000495010 COLCA2A8K830 154 aa7.39□□□□□ -1.23
VARS-228ENST00000495010 COPS9Q8WXC6 57 aa7.39□□□□□ -1.23
VARS-228ENST00000495010 C20orf202A1L168 122 aa7.38□□□□□ -1.23
VARS-228ENST00000495010 OBSCN-AS1Q96MR7 158 aa7.38□□□□□ -1.23
VARS-228ENST00000495010 Q75L30 129 aa7.37□□□□□ -1.23
VARS-228ENST00000495010 SYS1-DBNDD2H3BUS1 97 aa7.36□□□□□ -1.23
VARS-228ENST00000495010 SCGB1D4Q6XE38 83 aa7.36□□□□□ -1.23
VARS-228ENST00000495010 TTTY13Q9BZ97 58 aa7.35□□□□□ -1.23
VARS-228ENST00000495010 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
VARS-228ENST00000495010 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
VARS-228ENST00000495010 Q6JHZ5 121 aa7.33□□□□□ -1.24
VARS-228ENST00000495010 TRBV7-7A0A0K0K1E9 115 aa7.32□□□□□ -1.24
VARS-228ENST00000495010 IFITM1P13164 125 aa7.32□□□□□ -1.24
VARS-228ENST00000495010 Q96NJ1 140 aa7.32□□□□□ -1.24
VARS-228ENST00000495010 LINC01545Q5VT33 79 aa7.31□□□□□ -1.24
VARS-228ENST00000495010 CLEC2BQ92478 149 aa7.31□□□□□ -1.24
VARS-228ENST00000495010 TRAV13-2A0A0B4J235 113 aa7.3□□□□□ -1.24
VARS-228ENST00000495010 VAMP3Q15836 100 aa7.3□□□□□ -1.24
VARS-228ENST00000495010 PET117Q6UWS5 81 aa7.3□□□□□ -1.24
VARS-228ENST00000495010 SMIM11BQ8TCY0 68 aa7.29□□□□□ -1.24
VARS-228ENST00000495010 IGFL1Q6UW32 110 aa7.28□□□□□ -1.24
VARS-228ENST00000495010 Q6ZVH6 145 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms