RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SOSTDC1Q6X4U4 206 aa5.24□□□□□ -1.57
ITGB1-217ENST00000494395 BOD1L2Q8IYS8 172 aa5.24□□□□□ -1.57
ITGB1-217ENST00000494395 HIST1H2BLQ99880 126 aa5.24□□□□□ -1.57
ITGB1-217ENST00000494395 TTTY13Q9BZ97 58 aa5.24□□□□□ -1.57
ITGB1-217ENST00000494395 NCR3O14931 201 aa5.23□□□□□ -1.57
ITGB1-217ENST00000494395 PRR26Q8N8Z3 221 aa5.23□□□□□ -1.57
ITGB1-217ENST00000494395 TRBV10-2A0A0K0K1G8 114 aa5.22□□□□□ -1.57
ITGB1-217ENST00000494395 C20orf202A1L168 122 aa5.22□□□□□ -1.57
ITGB1-217ENST00000494395 KRTAP4-16G5E9R7 235 aaPredicted RBP5.22□□□□□ -1.57
ITGB1-217ENST00000494395 TIMM17BO60830 172 aa5.22□□□□□ -1.57
ITGB1-217ENST00000494395 NDUFC2O95298 119 aa5.22□□□□□ -1.57
ITGB1-217ENST00000494395 SPRR1AP35321 89 aa5.22□□□□□ -1.57
ITGB1-217ENST00000494395 KCNQ1DNQ9H478 68 aa5.22□□□□□ -1.57
ITGB1-217ENST00000494395 ZNF815PA8K554 130 aa5.21□□□□□ -1.58
ITGB1-217ENST00000494395 UBE2AP49459 152 aa5.21□□□□□ -1.58
ITGB1-217ENST00000494395 PRLHP81277 87 aa5.21□□□□□ -1.58
ITGB1-217ENST00000494395 FAM19A1Q7Z5A9 133 aa5.21□□□□□ -1.58
ITGB1-217ENST00000494395 ATOH7Q8N100 152 aa5.21□□□□□ -1.58
ITGB1-217ENST00000494395 TRBV10-3A0A0K0K1G6 114 aa5.2□□□□□ -1.58
ITGB1-217ENST00000494395 C5orf52A6NGY3 159 aa5.2□□□□□ -1.58
ITGB1-217ENST00000494395 AKR1D1P51857 326 aa5.2□□□□□ -1.58
ITGB1-217ENST00000494395 SPANXB1Q9NS25 103 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-217ENST00000494395 PAM16Q9Y3D7 125 aa5.2□□□□□ -1.58
ITGB1-217ENST00000494395 A0A087X002 238 aa5.19□□□□□ -1.58
ITGB1-217ENST00000494395 IGLV6-57P01721 117 aa5.19□□□□□ -1.58
ITGB1-217ENST00000494395 S100A6P06703 90 aa5.19□□□□□ -1.58
ITGB1-217ENST00000494395 S100A2P29034 98 aa5.19□□□□□ -1.58
ITGB1-217ENST00000494395 NPC2P61916 151 aa5.19□□□□□ -1.58
ITGB1-217ENST00000494395 SNRPEP62304 92 aaKnown RBP5.19□□□□□ -1.58
ITGB1-217ENST00000494395 LINC00337Q8N6G1 96 aa5.19□□□□□ -1.58
ITGB1-217ENST00000494395 LINC00308Q8TCZ7 52 aa5.19□□□□□ -1.58
ITGB1-217ENST00000494395 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
ITGB1-217ENST00000494395 DDTP30046 118 aa5.18□□□□□ -1.58
ITGB1-217ENST00000494395 PCP2Q8IVA1 136 aa5.18□□□□□ -1.58
ITGB1-217ENST00000494395 MIEN1Q9BRT3 115 aa5.18□□□□□ -1.58
ITGB1-217ENST00000494395 SPANXDQ9BXN6 97 aa5.18□□□□□ -1.58
ITGB1-217ENST00000494395 SPANXCQ9NY87 97 aa5.18□□□□□ -1.58
ITGB1-217ENST00000494395 RPL13AP40429 203 aaKnown RBP5.17□□□□□ -1.58
ITGB1-217ENST00000494395 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
ITGB1-217ENST00000494395 ANAPC11Q9NYG5 84 aa5.17□□□□□ -1.58
ITGB1-217ENST00000494395 FAM229BQ4G0N7 80 aa5.16□□□□□ -1.58
ITGB1-217ENST00000494395 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
ITGB1-217ENST00000494395 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
ITGB1-217ENST00000494395 PPDPFQ9H3Y8 114 aa5.16□□□□□ -1.58
ITGB1-217ENST00000494395 CRYGAP11844 174 aa5.15□□□□□ -1.59
ITGB1-217ENST00000494395 SMCR5Q8TEV8 140 aa5.15□□□□□ -1.59
ITGB1-217ENST00000494395 HIGD2AQ9BW72 106 aa5.15□□□□□ -1.59
ITGB1-217ENST00000494395 ETDCA0A1B0GVM5 59 aa5.14□□□□□ -1.59
ITGB1-217ENST00000494395 SCGB1D4Q6XE38 83 aa5.14□□□□□ -1.59
ITGB1-217ENST00000494395 SPRR4Q96PI1 79 aa5.14□□□□□ -1.59
ITGB1-217ENST00000494395 Q9BRP9 147 aa5.14□□□□□ -1.59
ITGB1-217ENST00000494395 TRAV23DV6A0A075B6W5 121 aa5.13□□□□□ -1.59
ITGB1-217ENST00000494395 ERC2-IT1O76042 136 aa5.13□□□□□ -1.59
ITGB1-217ENST00000494395 IFITM1P13164 125 aa5.13□□□□□ -1.59
ITGB1-217ENST00000494395 S100A7L2Q5SY68 101 aa5.13□□□□□ -1.59
ITGB1-217ENST00000494395 Q6ZRX8 168 aa5.13□□□□□ -1.59
ITGB1-217ENST00000494395 Q6ZVH6 145 aa5.13□□□□□ -1.59
ITGB1-217ENST00000494395 ZNF73O43830 326 aaPredicted RBP5.12□□□□□ -1.59
ITGB1-217ENST00000494395 S100A12P80511 92 aa5.12□□□□□ -1.59
ITGB1-217ENST00000494395 TYMSOSQ8TAI1 123 aa5.12□□□□□ -1.59
ITGB1-217ENST00000494395 HSBP1L1C9JCN9 74 aa5.11□□□□□ -1.59
ITGB1-217ENST00000494395 LINC00483Q53H64 154 aa5.11□□□□□ -1.59
ITGB1-217ENST00000494395 MUSTN1Q8IVN3 82 aa5.11□□□□□ -1.59
ITGB1-217ENST00000494395 LINC00518Q8N0U6 118 aa5.11□□□□□ -1.59
ITGB1-217ENST00000494395 C3orf22Q8N5N4 141 aa5.11□□□□□ -1.59
ITGB1-217ENST00000494395 ZNF706Q9Y5V0 76 aaPredicted RBP5.1□□□□□ -1.59
ITGB1-217ENST00000494395 COX8AP10176 69 aa5.09□□□□□ -1.59
ITGB1-217ENST00000494395 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
ITGB1-217ENST00000494395 JOSD1Q15040 202 aaPredicted RBP5.09□□□□□ -1.59
ITGB1-217ENST00000494395 OR13C6PQ8NH95 151 aa5.09□□□□□ -1.59
ITGB1-217ENST00000494395 COPS9Q8WXC6 57 aa5.09□□□□□ -1.59
ITGB1-217ENST00000494395 CBY1Q9Y3M2 126 aa5.09□□□□□ -1.59
ITGB1-217ENST00000494395 DLEU1O43261 78 aa5.08□□□□□ -1.6
ITGB1-217ENST00000494395 ELOF1P60002 83 aaKnown RBP5.07□□□□□ -1.6
ITGB1-217ENST00000494395 CTAG1AP78358 180 aa5.07□□□□□ -1.6
ITGB1-217ENST00000494395 C6orf99Q4VX62 202 aa5.07□□□□□ -1.6
ITGB1-217ENST00000494395 LINC00304Q8N9R0 145 aa5.07□□□□□ -1.6
ITGB1-217ENST00000494395 TRBV7-6A0A0J9YX20 115 aa5.06□□□□□ -1.6
ITGB1-217ENST00000494395 TSPAN13O95857 204 aa5.06□□□□□ -1.6
ITGB1-217ENST00000494395 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
ITGB1-217ENST00000494395 LRP2P98164 4655 aa5.05□□□□□ -1.6
ITGB1-217ENST00000494395 TRAV13-2A0A0B4J235 113 aa5.05□□□□□ -1.6
ITGB1-217ENST00000494395 A4D1N5 150 aa5.05□□□□□ -1.6
ITGB1-217ENST00000494395 COX7BP24311 80 aa5.05□□□□□ -1.6
ITGB1-217ENST00000494395 HINT1P49773 126 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-217ENST00000494395 PYY3Q5JQD4 70 aa5.05□□□□□ -1.6
ITGB1-217ENST00000494395 GAGE2AQ6NT46 116 aa5.05□□□□□ -1.6
ITGB1-217ENST00000494395 ST20-AS1Q8NBB2 130 aa5.05□□□□□ -1.6
ITGB1-217ENST00000494395 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
ITGB1-217ENST00000494395 A6NDN8 102 aa5.04□□□□□ -1.6
ITGB1-217ENST00000494395 SPRR1BP22528 89 aa5.04□□□□□ -1.6
ITGB1-217ENST00000494395 SPATA45Q537H7 98 aa5.04□□□□□ -1.6
ITGB1-217ENST00000494395 C2orf91Q6ZV80 131 aa5.04□□□□□ -1.6
ITGB1-217ENST00000494395 SMIM11BQ8TCY0 68 aa5.04□□□□□ -1.6
ITGB1-217ENST00000494395 C14orf144Q96I85 54 aa5.04□□□□□ -1.6
ITGB1-217ENST00000494395 VAMP8Q9BV40 100 aa5.04□□□□□ -1.6
ITGB1-217ENST00000494395 HIGD1BQ9P298 99 aa5.04□□□□□ -1.6
ITGB1-217ENST00000494395 A0A1B0GWB2 263 aa5.03□□□□□ -1.6
ITGB1-217ENST00000494395 UBE2V1Q13404 147 aa5.03□□□□□ -1.6
ITGB1-217ENST00000494395 Q8NBF4 154 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms