RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 FUSP35637 526 aaKnown RBP eCLIP6.21□□□□□ -1.42
BRCA1-219ENST00000491747 COX17Q14061 63 aa6.21□□□□□ -1.42
BRCA1-219ENST00000491747 Q8N814 137 aa6.21□□□□□ -1.42
BRCA1-219ENST00000491747 A0A087WVE0 104 aa6.21□□□□□ -1.42
BRCA1-219ENST00000491747 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
BRCA1-219ENST00000491747 KLK12Q9UKR0 248 aa6.2□□□□□ -1.42
BRCA1-219ENST00000491747 A0A087WTM6 91 aa6.2□□□□□ -1.42
BRCA1-219ENST00000491747 TMEM258P61165 79 aa6.2□□□□□ -1.42
BRCA1-219ENST00000491747 DNAH5Q8TE73 4624 aa6.19□□□□□ -1.42
BRCA1-219ENST00000491747 LRCOL1A6NCL2 159 aa6.19□□□□□ -1.42
BRCA1-219ENST00000491747 CLPSL2Q6UWE3 100 aa6.19□□□□□ -1.42
BRCA1-219ENST00000491747 CD164L2Q6UWJ8 174 aa6.18□□□□□ -1.42
BRCA1-219ENST00000491747 LOC107984640A0A0U1RRK4 108 aa6.18□□□□□ -1.42
BRCA1-219ENST00000491747 ENHOQ6UWT2 76 aa6.18□□□□□ -1.42
BRCA1-219ENST00000491747 UBL5Q9BZL1 73 aa6.18□□□□□ -1.42
BRCA1-219ENST00000491747 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
BRCA1-219ENST00000491747 C16orf90A8MZG2 172 aa6.17□□□□□ -1.42
BRCA1-219ENST00000491747 PRR3P79522 188 aaKnown RBP6.17□□□□□ -1.42
BRCA1-219ENST00000491747 KIAA0087Q14695 138 aa6.17□□□□□ -1.42
BRCA1-219ENST00000491747 TRBV10-3A0A0K0K1G6 114 aa6.16□□□□□ -1.42
BRCA1-219ENST00000491747 PSCAO43653 123 aa6.16□□□□□ -1.42
BRCA1-219ENST00000491747 C6orf99Q4VX62 202 aa6.16□□□□□ -1.42
BRCA1-219ENST00000491747 LRP1BQ9NZR2 4599 aa6.16□□□□□ -1.42
BRCA1-219ENST00000491747 ANGP03950 147 aaKnown RBP6.16□□□□□ -1.42
BRCA1-219ENST00000491747 LINC00269Q8N2A0 174 aa6.16□□□□□ -1.42
BRCA1-219ENST00000491747 CYSTM1Q9H1C7 97 aa6.16□□□□□ -1.42
BRCA1-219ENST00000491747 FAM19A5Q7Z5A7 132 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-219ENST00000491747 CHCHD10Q8WYQ3 142 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-219ENST00000491747 IGKV2D-24A0A075B6R9 120 aa6.15□□□□□ -1.43
BRCA1-219ENST00000491747 GHRHP01286 108 aa6.14□□□□□ -1.43
BRCA1-219ENST00000491747 RBM3P98179 157 aaKnown RBP6.14□□□□□ -1.43
BRCA1-219ENST00000491747 REG3AQ06141 175 aa6.14□□□□□ -1.43
BRCA1-219ENST00000491747 LINC00575Q6W349 94 aa6.14□□□□□ -1.43
BRCA1-219ENST00000491747 PRR34Q9NV39 138 aa6.14□□□□□ -1.43
BRCA1-219ENST00000491747 DPH3Q96FX2 82 aa6.14□□□□□ -1.43
BRCA1-219ENST00000491747 HERC2O95714 4834 aa6.14□□□□□ -1.43
BRCA1-219ENST00000491747 IGLV10-54A0A075B6I4 117 aa6.13□□□□□ -1.43
BRCA1-219ENST00000491747 TRAV23DV6A0A075B6W5 121 aa6.13□□□□□ -1.43
BRCA1-219ENST00000491747 ZNF561-AS1K7EIQ3 104 aa6.13□□□□□ -1.43
BRCA1-219ENST00000491747 KRTAP26-1Q6PEX3 210 aa6.13□□□□□ -1.43
BRCA1-219ENST00000491747 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
BRCA1-219ENST00000491747 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-219ENST00000491747 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
BRCA1-219ENST00000491747 H3BQ85 93 aa6.12□□□□□ -1.43
BRCA1-219ENST00000491747 FAM19A1Q7Z5A9 133 aa6.12□□□□□ -1.43
BRCA1-219ENST00000491747 RMI2Q96E14 147 aa6.12□□□□□ -1.43
BRCA1-219ENST00000491747 LAMTOR3Q9UHA4 124 aa6.12□□□□□ -1.43
BRCA1-219ENST00000491747 LOC110117498A0A087WWA1 95 aa6.11□□□□□ -1.43
BRCA1-219ENST00000491747 NDUFC2-KCTD14E9PQ53 114 aa6.11□□□□□ -1.43
BRCA1-219ENST00000491747 Q6ZQT0 140 aa6.11□□□□□ -1.43
BRCA1-219ENST00000491747 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
BRCA1-219ENST00000491747 HSPG2P98160 4391 aa6.11□□□□□ -1.43
BRCA1-219ENST00000491747 KRTAP10-1P60331 282 aa6.11□□□□□ -1.43
BRCA1-219ENST00000491747 RYR1P21817 5038 aa6.11□□□□□ -1.43
BRCA1-219ENST00000491747 PDE6GP18545 87 aa6.1□□□□□ -1.43
BRCA1-219ENST00000491747 SPAG11BQ08648 103 aa6.1□□□□□ -1.43
BRCA1-219ENST00000491747 C5orf47Q569G3 176 aa6.1□□□□□ -1.43
BRCA1-219ENST00000491747 DSCR8Q96T75 97 aa6.1□□□□□ -1.43
BRCA1-219ENST00000491747 BCE1O60756 84 aa6.1□□□□□ -1.43
BRCA1-219ENST00000491747 Q8NDZ9 215 aa6.1□□□□□ -1.43
BRCA1-219ENST00000491747 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-219ENST00000491747 IGLV5-52A0A0A0MRZ9 124 aa6.09□□□□□ -1.43
BRCA1-219ENST00000491747 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
BRCA1-219ENST00000491747 CDK2AP2O75956 126 aa6.08□□□□□ -1.44
BRCA1-219ENST00000491747 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
BRCA1-219ENST00000491747 LINC01547P58512 204 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-219ENST00000491747 C10orf25Q5T742 122 aa6.08□□□□□ -1.44
BRCA1-219ENST00000491747 Q6ZQY7 126 aa6.08□□□□□ -1.44
BRCA1-219ENST00000491747 C20orf197Q8N268 126 aa6.08□□□□□ -1.44
BRCA1-219ENST00000491747 DNAH8Q96JB1 4490 aa6.07□□□□□ -1.44
BRCA1-219ENST00000491747 TRAV7A0A075B6U4 112 aa6.07□□□□□ -1.44
BRCA1-219ENST00000491747 HAMPP81172 84 aa6.07□□□□□ -1.44
BRCA1-219ENST00000491747 Q6ZVQ6 151 aa6.07□□□□□ -1.44
BRCA1-219ENST00000491747 DIRC1Q969H9 104 aa6.07□□□□□ -1.44
BRCA1-219ENST00000491747 GVQW2A0A096LPI5 108 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-219ENST00000491747 CXCL6P80162 114 aa6.06□□□□□ -1.44
BRCA1-219ENST00000491747 FAM30AQ9NZY2 134 aa6.06□□□□□ -1.44
BRCA1-219ENST00000491747 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
BRCA1-219ENST00000491747 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-219ENST00000491747 FAM236DA0A1B0GTK5 79 aa6.04□□□□□ -1.44
BRCA1-219ENST00000491747 OXTP01178 125 aa6.04□□□□□ -1.44
BRCA1-219ENST00000491747 FAM236CP0DP71 79 aa6.04□□□□□ -1.44
BRCA1-219ENST00000491747 ZNF73O43830 326 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-219ENST00000491747 KLKP1Q107X0 134 aa6.03□□□□□ -1.44
BRCA1-219ENST00000491747 C14orf177Q52M58 125 aa6.03□□□□□ -1.44
BRCA1-219ENST00000491747 C15orf56Q8N910 161 aa6.03□□□□□ -1.44
BRCA1-219ENST00000491747 TRBV7-6A0A0J9YX20 115 aa6.02□□□□□ -1.45
BRCA1-219ENST00000491747 TRBV7-4A0A0J9YYF1 115 aa6.02□□□□□ -1.45
BRCA1-219ENST00000491747 COX7BP24311 80 aa6.02□□□□□ -1.45
BRCA1-219ENST00000491747 XAGE1AQ9HD64 81 aa6.02□□□□□ -1.45
BRCA1-219ENST00000491747 C6orf48Q9UBA6 75 aa6.02□□□□□ -1.45
BRCA1-219ENST00000491747 H7BZZ5 65 aa6.02□□□□□ -1.45
BRCA1-219ENST00000491747 ELOF1P60002 83 aaKnown RBP6.02□□□□□ -1.45
BRCA1-219ENST00000491747 Q6ZSA8 131 aa6.01□□□□□ -1.45
BRCA1-219ENST00000491747 HIGD2BQ4VC39 106 aa6□□□□□ -1.45
BRCA1-219ENST00000491747 Q5XG85 94 aa6□□□□□ -1.45
BRCA1-219ENST00000491747 Q8N1X5 172 aa6□□□□□ -1.45
BRCA1-219ENST00000491747 SMR3BP02814 79 aaPredicted RBP6□□□□□ -1.45
BRCA1-219ENST00000491747 C9orf163Q8N9P6 203 aa6□□□□□ -1.45
BRCA1-219ENST00000491747 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms