RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 HCG22E2RYF7 251 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 NREPQ16612 68 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 DEFB112Q30KQ8 113 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.94□□□□□ -1.94
RTN4-215ENST00000491592 Q8NAQ8 132 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 C20orf166-AS1Q96NR2 134 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 TRIOO75962 3097 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 NBEAQ8NFP9 2946 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 TRGV2A0A075B6R0 118 aa2.93□□□□□ -1.94
RTN4-215ENST00000491592 C16orf90A8MZG2 172 aa2.93□□□□□ -1.94
RTN4-215ENST00000491592 KRTAP1-4P0C5Y4 121 aa2.93□□□□□ -1.94
RTN4-215ENST00000491592 SNURFQ9Y675 71 aa2.93□□□□□ -1.94
RTN4-215ENST00000491592 FRYQ5TBA9 3013 aa2.93□□□□□ -1.94
RTN4-215ENST00000491592 VCANP13611 3396 aa2.92□□□□□ -1.94
RTN4-215ENST00000491592 ABCA2Q9BZC7 2435 aa2.92□□□□□ -1.94
RTN4-215ENST00000491592 FRYLO94915 3013 aa2.92□□□□□ -1.94
RTN4-215ENST00000491592 IGKV3OR2-268A0A0C4DH90 116 aa2.92□□□□□ -1.94
RTN4-215ENST00000491592 IGLV6-57P01721 117 aa2.92□□□□□ -1.94
RTN4-215ENST00000491592 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
RTN4-215ENST00000491592 C10orf99Q6UWK7 81 aa2.92□□□□□ -1.94
RTN4-215ENST00000491592 CCL19Q99731 98 aa2.92□□□□□ -1.94
RTN4-215ENST00000491592 NOP10Q9NPE3 64 aaKnown RBP2.92□□□□□ -1.94
RTN4-215ENST00000491592 USP34Q70CQ2 3546 aa2.92□□□□□ -1.94
RTN4-215ENST00000491592 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.92□□□□□ -1.942e-8■■■■■ 35
RTN4-215ENST00000491592 SPTA1P02549 2419 aa2.91□□□□□ -1.94
RTN4-215ENST00000491592 AKAP6Q13023 2319 aa2.91□□□□□ -1.94
RTN4-215ENST00000491592 SPTAN1Q13813 2472 aaKnown RBP2.91□□□□□ -1.94
RTN4-215ENST00000491592 COX7BP24311 80 aa2.91□□□□□ -1.94
RTN4-215ENST00000491592 SPEGQ15772 3267 aa2.91□□□□□ -1.94
RTN4-215ENST00000491592 COL6A3P12111 3177 aa2.91□□□□□ -1.94
RTN4-215ENST00000491592 ZZEF1O43149 2961 aa2.91□□□□□ -1.94
RTN4-215ENST00000491592 CFAP54Q96N23 3096 aa2.9□□□□□ -1.94
RTN4-215ENST00000491592 DSPP15924 2871 aaKnown RBP2.9□□□□□ -1.95
RTN4-215ENST00000491592 GVQW2A0A096LPI5 108 aaPredicted RBP2.9□□□□□ -1.95
RTN4-215ENST00000491592 Q6ZQY7 126 aa2.9□□□□□ -1.95
RTN4-215ENST00000491592 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
RTN4-215ENST00000491592 LCE6AA0A183 80 aa2.89□□□□□ -1.95
RTN4-215ENST00000491592 A8MU10 97 aa2.89□□□□□ -1.95
RTN4-215ENST00000491592 PSCAO43653 123 aa2.89□□□□□ -1.95
RTN4-215ENST00000491592 DEFB136Q30KP8 78 aa2.89□□□□□ -1.95
RTN4-215ENST00000491592 LIMD2Q9BT23 127 aa2.89□□□□□ -1.95
RTN4-215ENST00000491592 VPS13AQ96RL7 3174 aa2.89□□□□□ -1.95
RTN4-215ENST00000491592 PRRC2CQ9Y520 2896 aaKnown RBP2.88□□□□□ -1.95
RTN4-215ENST00000491592 CREBBPQ92793 2442 aa2.88□□□□□ -1.95
RTN4-215ENST00000491592 M0R2N4 97 aa2.88□□□□□ -1.95
RTN4-215ENST00000491592 TNRC18O15417 2968 aaPredicted RBP2.88□□□□□ -1.95
RTN4-215ENST00000491592 IGKV4-1P06312 121 aa2.88□□□□□ -1.95
RTN4-215ENST00000491592 ELOF1P60002 83 aaKnown RBP2.88□□□□□ -1.95
RTN4-215ENST00000491592 HIGD2AQ9BW72 106 aa2.88□□□□□ -1.95
RTN4-215ENST00000491592 PRO0255Q9UI72 69 aa2.88□□□□□ -1.95
RTN4-215ENST00000491592 CSPG4Q6UVK1 2322 aa2.88□□□□□ -1.95
RTN4-215ENST00000491592 SPAG11BQ08648 103 aa2.87□□□□□ -1.95
RTN4-215ENST00000491592 HIVEP3Q5T1R4 2406 aa2.87□□□□□ -1.95
RTN4-215ENST00000491592 SPTBN5Q9NRC6 3674 aaKnown RBP2.86□□□□□ -1.95
RTN4-215ENST00000491592 GVINP1Q7Z2Y8 2422 aa2.86□□□□□ -1.95
RTN4-215ENST00000491592 NDUFB1O75438 58 aa2.86□□□□□ -1.95
RTN4-215ENST00000491592 ANGP03950 147 aaKnown RBP2.86□□□□□ -1.95
RTN4-215ENST00000491592 DEFB113Q30KQ7 82 aa2.86□□□□□ -1.95
RTN4-215ENST00000491592 TLN1Q9Y490 2541 aaKnown RBP2.86□□□□□ -1.95
RTN4-215ENST00000491592 FREM2Q5SZK8 3169 aa2.86□□□□□ -1.95
RTN4-215ENST00000491592 TRAV22A0A0B4J277 110 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 ETDCA0A1B0GVM5 59 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 ZNF861PO60384 105 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 SPINT4Q6UDR6 99 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 UNQ6190/PRO20217Q6UXQ8 127 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 ZCCHC13Q8WW36 166 aaKnown RBP2.85□□□□□ -1.95
RTN4-215ENST00000491592 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 KLK12Q9UKR0 248 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 CELSR3Q9NYQ7 3312 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 PIEZO2Q9H5I5 2752 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 WDFY3Q8IZQ1 3526 aa2.85□□□□□ -1.95
RTN4-215ENST00000491592 IGLV5-48A0A075B6I7 105 aa2.84□□□□□ -1.95
RTN4-215ENST00000491592 CHKB-CPT1BH3BT56 60 aa2.84□□□□□ -1.95
RTN4-215ENST00000491592 DEFB130BP0DP73 79 aa2.84□□□□□ -1.95
RTN4-215ENST00000491592 DEFB130AP0DP74 79 aa2.84□□□□□ -1.95
RTN4-215ENST00000491592 MOBPQ13875 183 aa2.84□□□□□ -1.95
RTN4-215ENST00000491592 CLPSL2Q6UWE3 100 aa2.84□□□□□ -1.95
RTN4-215ENST00000491592 C2CD3Q4AC94 2353 aa2.83□□□□□ -1.96
RTN4-215ENST00000491592 LINC00483Q53H64 154 aa2.83□□□□□ -1.96
RTN4-215ENST00000491592 LELP1Q5T871 98 aa2.83□□□□□ -1.96
RTN4-215ENST00000491592 KRTAP26-1Q6PEX3 210 aa2.83□□□□□ -1.96
RTN4-215ENST00000491592 DMAC1Q96GE9 116 aa2.83□□□□□ -1.96
RTN4-215ENST00000491592 PSORS1C2Q9UIG4 136 aa2.83□□□□□ -1.96
RTN4-215ENST00000491592 PRUNE2Q8WUY3 3088 aa2.83□□□□□ -1.96
RTN4-215ENST00000491592 CFAP47Q6ZTR5 3102 aa2.83□□□□□ -1.96
RTN4-215ENST00000491592 CR1P17927 2039 aa2.83□□□□□ -1.96
RTN4-215ENST00000491592 ANKRD11Q6UB99 2663 aaPredicted RBP2.83□□□□□ -1.96
RTN4-215ENST00000491592 NBASA2RRP1 2371 aa2.82□□□□□ -1.96
RTN4-215ENST00000491592 RIF1Q5UIP0 2472 aaKnown RBP2.82□□□□□ -1.96
RTN4-215ENST00000491592 KALRNO60229 2985 aa2.82□□□□□ -1.96
RTN4-215ENST00000491592 P0C880 135 aa2.82□□□□□ -1.96
RTN4-215ENST00000491592 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
RTN4-215ENST00000491592 KPRPQ5T749 579 aaPredicted RBP2.82□□□□□ -1.96
RTN4-215ENST00000491592 Q5VV11 94 aa2.82□□□□□ -1.96
RTN4-215ENST00000491592 KCNQ1DNQ9H478 68 aa2.82□□□□□ -1.96
RTN4-215ENST00000491592 C6orf48Q9UBA6 75 aa2.82□□□□□ -1.96
RTN4-215ENST00000491592 A0A1W2PNM2 257 aa2.81□□□□□ -1.96
RTN4-215ENST00000491592 Q8N9L7 120 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms