RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.77□□□□□ -2.53
CD46-216ENST00000490278 CLIP1P30622 1438 aa-0.77□□□□□ -2.53
CD46-216ENST00000490278 GNGT2O14610 69 aa-0.77□□□□□ -2.53
CD46-216ENST00000490278 RPL13AP3Q6NVV1 102 aa-0.77□□□□□ -2.53
CD46-216ENST00000490278 LRRC37AA6NMS7 1700 aa-0.78□□□□□ -2.53
CD46-216ENST00000490278 C5P01031 1676 aa-0.78□□□□□ -2.53
CD46-216ENST00000490278 ARHGAP5Q13017 1502 aa-0.78□□□□□ -2.53
CD46-216ENST00000490278 A0A1B0GV90 55 aa-0.78□□□□□ -2.53
CD46-216ENST00000490278 PPP3R1P63098 170 aa-0.78□□□□□ -2.53
CD46-216ENST00000490278 TMEM203Q969S6 136 aa-0.78□□□□□ -2.53
CD46-216ENST00000490278 CGREF1Q99674 301 aa-0.78□□□□□ -2.53
CD46-216ENST00000490278 CHD7Q9P2D1 2997 aa-0.78□□□□□ -2.53
CD46-216ENST00000490278 AP4S1Q9Y587 144 aa-0.78□□□□□ -2.53
CD46-216ENST00000490278 MYOM2P54296 1465 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 TLN2Q9Y4G6 2542 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 COL12A1Q99715 3063 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 UBR3Q6ZT12 1888 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 H0YAA0 97 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 LEPROTL1O95214 131 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 UQCRHP07919 91 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 PMCHL1Q16048 86 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 ALKQ9UM73 1620 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 DIP2CQ9Y2E4 1556 aa-0.79□□□□□ -2.54
CD46-216ENST00000490278 C9orf92A6NGG3 77 aa-0.8□□□□□ -2.54
CD46-216ENST00000490278 D6R8Y8 96 aa-0.8□□□□□ -2.54
CD46-216ENST00000490278 DEFB1P60022 68 aa-0.8□□□□□ -2.54
CD46-216ENST00000490278 KRTDAPP60985 99 aa-0.8□□□□□ -2.54
CD46-216ENST00000490278 MUSTN1Q8IVN3 82 aa-0.8□□□□□ -2.54
CD46-216ENST00000490278 PMCHL2Q9BQD1 86 aa-0.8□□□□□ -2.54
CD46-216ENST00000490278 MAPKBP1O60336 1514 aa-0.8□□□□□ -2.54
CD46-216ENST00000490278 EYSQ5T1H1 3165 aa-0.8□□□□□ -2.54
CD46-216ENST00000490278 NRXN1Q9ULB1 1477 aa-0.8□□□□□ -2.54
CD46-216ENST00000490278 ABCC5O15440 1437 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 CHD1O14646 1710 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 NALCNQ8IZF0 1738 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 KIAA1551Q9HCM1 1747 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 SMG1Q96Q15 3661 aaKnown RBP-0.81□□□□□ -2.54
CD46-216ENST00000490278 SAMD9Q5K651 1589 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 CSMD1Q96PZ7 3565 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 TRBV25-1A0A075B6N4 114 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 F8WEM9 126 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 COX7BP24311 80 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 GNG4P50150 75 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 NMSQ5H8A3 153 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 TRGV9Q99603 122 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 IER3IP1Q9Y5U9 82 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 ADGRG4Q8IZF6 3080 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 ABCA3Q99758 1704 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 ITPR1Q14643 2758 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 SHPRHQ149N8 1683 aa-0.81□□□□□ -2.54
CD46-216ENST00000490278 TRRAPQ9Y4A5 3859 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 SPTAN1Q13813 2472 aaKnown RBP-0.82□□□□□ -2.54
CD46-216ENST00000490278 FAM135AQ9P2D6 1515 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 MT-ATP8P03928 68 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 LINC00158P58513 81 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 ETDBQ3ZM63 59 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 GTF2H5Q6ZYL4 71 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 DEFB106AQ8N104 65 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 GNG8Q9UK08 70 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 LRBAP50851 2863 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 SPHKAPQ2M3C7 1700 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 PZPP20742 1482 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 MLH3Q9UHC1 1453 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 TOPAZ1Q8N9V7 1692 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 PREX1Q8TCU6 1659 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 DNAH5Q8TE73 4624 aa-0.82□□□□□ -2.54
CD46-216ENST00000490278 NRKQ7Z2Y5 1582 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 CEP295Q9C0D2 2601 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 MAP3K1Q13233 1512 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 LRRC7Q96NW7 1537 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 MYH4Q9Y623 1939 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 MYO9AB2RTY4 2548 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 CELSR3Q9NYQ7 3312 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.83□□□□□ -2.54
CD46-216ENST00000490278 MAGI2Q86UL8 1455 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 MRC2Q9UBG0 1479 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 IQCF6A8MYZ5 107 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 H7BZZ5 65 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 CORTO00230 105 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 DLEU1O43261 78 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 FAUP35544 74 aaKnown RBP-0.83□□□□□ -2.54
CD46-216ENST00000490278 COL5A1-AS1Q5SY13 56 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 GAFA1Q96PS6 74 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 PRO3102Q9H379 93 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 UBE2D4Q9Y2X8 147 aa-0.83□□□□□ -2.54
CD46-216ENST00000490278 EFCAB10A6NFE3 127 aa-0.84□□□□□ -2.54
CD46-216ENST00000490278 S100A10P60903 97 aa-0.84□□□□□ -2.54
CD46-216ENST00000490278 MT1HP80294 61 aa-0.84□□□□□ -2.54
CD46-216ENST00000490278 PRLHP81277 87 aa-0.84□□□□□ -2.54
CD46-216ENST00000490278 SERP2Q8N6R1 65 aa-0.84□□□□□ -2.54
CD46-216ENST00000490278 WFDC9Q8NEX5 89 aa-0.84□□□□□ -2.54
CD46-216ENST00000490278 PKD1L3Q7Z443 1732 aa-0.84□□□□□ -2.54
CD46-216ENST00000490278 ANKRD36BQ8N2N9 1353 aa-0.84□□□□□ -2.54
CD46-216ENST00000490278 USP32Q8NFA0 1604 aa-0.85□□□□□ -2.55
CD46-216ENST00000490278 K7EP34 96 aa-0.85□□□□□ -2.55
CD46-216ENST00000490278 RGPD1P0DJD0 1748 aa-0.85□□□□□ -2.55
CD46-216ENST00000490278 RPL38P63173 70 aaKnown RBP-0.85□□□□□ -2.55
CD46-216ENST00000490278 QSER1Q2KHR3 1735 aa-0.85□□□□□ -2.55
CD46-216ENST00000490278 CRYBG1Q9Y4K1 1723 aa-0.85□□□□□ -2.55
CD46-216ENST00000490278 DNAH10Q8IVF4 4471 aa-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms