RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 C2CD3Q4AC94 2353 aa1.67□□□□□ -2.14
UBXN4-208ENST00000490163 COL6A6A6NMZ7 2263 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 NDUFA4O00483 81 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 ELOF1P60002 83 aaKnown RBP1.66□□□□□ -2.14
UBXN4-208ENST00000490163 KLK9Q2XQG4 91 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 CNOT1A5YKK6 2376 aaKnown RBP1.66□□□□□ -2.14
UBXN4-208ENST00000490163 CFAP54Q96N23 3096 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 TRGV2A0A075B6R0 118 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 IGKV3OR2-268A0A0C4DH90 116 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 LOC101927531A0A1B0GV80 90 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 ETDCA0A1B0GVM5 59 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 M0R2N4 97 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 IGKV4-1P06312 121 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 HTN1P15515 57 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 SPEGQ15772 3267 aa1.66□□□□□ -2.14
UBXN4-208ENST00000490163 COX7BP24311 80 aa1.65□□□□□ -2.14
UBXN4-208ENST00000490163 KRTAP10-6P60371 365 aaPredicted RBP1.65□□□□□ -2.14
UBXN4-208ENST00000490163 MINOS1Q5TGZ0 78 aa1.65□□□□□ -2.14
UBXN4-208ENST00000490163 Q6ZQY7 126 aa1.65□□□□□ -2.14
UBXN4-208ENST00000490163 CREBBPQ92793 2442 aa1.65□□□□□ -2.14
UBXN4-208ENST00000490163 FRYLO94915 3013 aa1.65□□□□□ -2.14
UBXN4-208ENST00000490163 MUC6Q6W4X9 2439 aa1.65□□□□□ -2.14
UBXN4-208ENST00000490163 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
UBXN4-208ENST00000490163 MOBPQ13875 183 aa1.65□□□□□ -2.15
UBXN4-208ENST00000490163 DEFB114Q30KQ6 69 aa1.65□□□□□ -2.15
UBXN4-208ENST00000490163 LINC00575Q6W349 94 aa1.65□□□□□ -2.15
UBXN4-208ENST00000490163 RETNLBQ9BQ08 111 aa1.65□□□□□ -2.15
UBXN4-208ENST00000490163 WFDC10AQ9H1F0 79 aa1.65□□□□□ -2.15
UBXN4-208ENST00000490163 CDC42SE2Q9NRR3 84 aa1.65□□□□□ -2.15
UBXN4-208ENST00000490163 KAAG1Q9UBP8 84 aa1.65□□□□□ -2.15
UBXN4-208ENST00000490163 PTPRZ1P23471 2315 aaPredicted RBP1.65□□□□□ -2.15
UBXN4-208ENST00000490163 SPINK13Q1W4C9 94 aa1.65□□□□□ -2.15
UBXN4-208ENST00000490163 HRNRQ86YZ3 2850 aaPredicted RBP1.65□□□□□ -2.15
UBXN4-208ENST00000490163 SPTA1P02549 2419 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 FREM2Q5SZK8 3169 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 IGLV4-60A0A075B6I1 120 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 A0A087WSZ3 146 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 IGHV3-53P01767 116 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 SPAG11BQ08648 103 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 DEFB116Q30KQ4 102 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 KRTAP26-1Q6PEX3 210 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 Q9BRP9 147 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 RHPN1-AS1Q9BWJ2 59 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 USP24Q9UPU5 2620 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 ASPMQ8IZT6 3477 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.64□□□□□ -2.15
UBXN4-208ENST00000490163 GVINP1Q7Z2Y8 2422 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 ZCCHC13Q8WW36 166 aaKnown RBP1.64□□□□□ -2.15
UBXN4-208ENST00000490163 PSORS1C2Q9UIG4 136 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 PDZD2O15018 2839 aa1.64□□□□□ -2.15
UBXN4-208ENST00000490163 NOTCH3Q9UM47 2321 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 ODF3BA8MYP8 253 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 G3V318 75 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 C3orf84H3BNL1 204 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 DNAH10OSP0CZ25 163 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 BSPH1Q075Z2 132 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 NCOR1O75376 2440 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 ACACAQ13085 2346 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 NBPF19A0A087WUL8 3843 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 DYNC2H1Q8NCM8 4307 aaKnown RBP1.63□□□□□ -2.15
UBXN4-208ENST00000490163 LCE6AA0A183 80 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 DEFB112Q30KQ8 113 aa1.63□□□□□ -2.15
UBXN4-208ENST00000490163 ZDBF2Q9HCK1 2354 aa1.62□□□□□ -2.15
UBXN4-208ENST00000490163 MINOS1-NBL1R4GNA1 71 aa1.62□□□□□ -2.15
UBXN4-208ENST00000490163 ASB16-AS1Q495Z4 193 aa1.62□□□□□ -2.15
UBXN4-208ENST00000490163 COA5Q86WW8 74 aa1.62□□□□□ -2.15
UBXN4-208ENST00000490163 DNAH6Q9C0G6 4158 aa1.62□□□□□ -2.15
UBXN4-208ENST00000490163 ABCA2Q9BZC7 2435 aa1.62□□□□□ -2.15
UBXN4-208ENST00000490163 WNK1Q9H4A3 2382 aa1.62□□□□□ -2.15
UBXN4-208ENST00000490163 SPTAN1Q13813 2472 aaKnown RBP1.62□□□□□ -2.15
UBXN4-208ENST00000490163 KLK12Q9UKR0 248 aa1.62□□□□□ -2.15
UBXN4-208ENST00000490163 SMG1Q96Q15 3661 aaKnown RBP1.62□□□□□ -2.15
UBXN4-208ENST00000490163 CELSR3Q9NYQ7 3312 aa1.62□□□□□ -2.15
UBXN4-208ENST00000490163 H3BPC8 53 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 J3QKU1 62 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 Q8IZM0 81 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 USMG5Q96IX5 58 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 FBN2P35556 2912 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 VPS13CQ709C8 3753 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 ZFHX3Q15911 3703 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 TRGV1A0A0A0MS02 117 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 A8MTW9 85 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 H0Y9P7 68 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 COX17Q14061 63 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 KRTAP5-4Q6L8H1 288 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 SPAG11AQ6PDA7 123 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 LINC01558Q9Y6Z2 57 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 CFAP47Q6ZTR5 3102 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 TRGV4A0A0C4DH28 118 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 LYNX1G3V0Z9 82 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 LYNX1P0DP58 116 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 TENM4Q6N022 2769 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 IGSF10Q6WRI0 2623 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 KCNQ1DNQ9H478 68 aa1.61□□□□□ -2.15
UBXN4-208ENST00000490163 GPR179Q6PRD1 2367 aa1.6□□□□□ -2.15
UBXN4-208ENST00000490163 KALRNO60229 2985 aa1.6□□□□□ -2.15
UBXN4-208ENST00000490163 SPINK7P58062 85 aa1.6□□□□□ -2.15
UBXN4-208ENST00000490163 WFDC13Q8IUB5 93 aa1.6□□□□□ -2.15
UBXN4-208ENST00000490163 PRO2289Q9P1D8 64 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms