RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 KCNQ1DNQ9H478 68 aa6.74□□□□□ -1.33
ACTN4-206ENST00000489451 SPANXB1Q9NS25 103 aaPredicted RBP6.74□□□□□ -1.33
ACTN4-206ENST00000489451 A0A0J9YXY3 114 aa6.73□□□□□ -1.33
ACTN4-206ENST00000489451 ETDCA0A1B0GVM5 59 aa6.73□□□□□ -1.33
ACTN4-206ENST00000489451 NDUFC2O95298 119 aa6.73□□□□□ -1.33
ACTN4-206ENST00000489451 S100A7L2Q5SY68 101 aa6.73□□□□□ -1.33
ACTN4-206ENST00000489451 IGLV7-46A0A075B6I9 117 aa6.72□□□□□ -1.33
ACTN4-206ENST00000489451 TRBV10-3A0A0K0K1G6 114 aa6.72□□□□□ -1.33
ACTN4-206ENST00000489451 DDTP30046 118 aa6.72□□□□□ -1.33
ACTN4-206ENST00000489451 LINC00337Q8N6G1 96 aa6.72□□□□□ -1.33
ACTN4-206ENST00000489451 ZNF706Q9Y5V0 76 aaPredicted RBP6.72□□□□□ -1.33
ACTN4-206ENST00000489451 ZNF815PA8K554 130 aa6.71□□□□□ -1.34
ACTN4-206ENST00000489451 CBY1Q9Y3M2 126 aa6.71□□□□□ -1.34
ACTN4-206ENST00000489451 TIMM17BO60830 172 aa6.7□□□□□ -1.34
ACTN4-206ENST00000489451 SPRR1AP35321 89 aa6.7□□□□□ -1.34
ACTN4-206ENST00000489451 ADAMTSL4-AS1Q5T5F5 129 aa6.7□□□□□ -1.34
ACTN4-206ENST00000489451 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
ACTN4-206ENST00000489451 S100A2P29034 98 aa6.69□□□□□ -1.34
ACTN4-206ENST00000489451 NPC2P61916 151 aa6.69□□□□□ -1.34
ACTN4-206ENST00000489451 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
ACTN4-206ENST00000489451 S100A6P06703 90 aa6.68□□□□□ -1.34
ACTN4-206ENST00000489451 CTAG1AP78358 180 aa6.68□□□□□ -1.34
ACTN4-206ENST00000489451 SCGB1D4Q6XE38 83 aa6.68□□□□□ -1.34
ACTN4-206ENST00000489451 COPS9Q8WXC6 57 aa6.68□□□□□ -1.34
ACTN4-206ENST00000489451 SPRR4Q96PI1 79 aa6.68□□□□□ -1.34
ACTN4-206ENST00000489451 PPDPFQ9H3Y8 114 aa6.68□□□□□ -1.34
ACTN4-206ENST00000489451 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
ACTN4-206ENST00000489451 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
ACTN4-206ENST00000489451 HINT1P49773 126 aaPredicted RBP6.67□□□□□ -1.34
ACTN4-206ENST00000489451 SNRPEP62304 92 aaKnown RBP6.67□□□□□ -1.34
ACTN4-206ENST00000489451 JOSD1Q15040 202 aaPredicted RBP6.67□□□□□ -1.34
ACTN4-206ENST00000489451 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
ACTN4-206ENST00000489451 TRAV23DV6A0A075B6W5 121 aa6.66□□□□□ -1.34
ACTN4-206ENST00000489451 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
ACTN4-206ENST00000489451 SOSTDC1Q6X4U4 206 aa6.66□□□□□ -1.34
ACTN4-206ENST00000489451 SMCR5Q8TEV8 140 aa6.66□□□□□ -1.34
ACTN4-206ENST00000489451 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
ACTN4-206ENST00000489451 B5MCH6 92 aa6.65□□□□□ -1.34
ACTN4-206ENST00000489451 LINC00518Q8N0U6 118 aa6.65□□□□□ -1.34
ACTN4-206ENST00000489451 ATOH7Q8N100 152 aa6.65□□□□□ -1.34
ACTN4-206ENST00000489451 OR13C6PQ8NH95 151 aa6.65□□□□□ -1.34
ACTN4-206ENST00000489451 LITAFQ99732 161 aa6.65□□□□□ -1.34
ACTN4-206ENST00000489451 ZNF73O43830 326 aaPredicted RBP6.64□□□□□ -1.35
ACTN4-206ENST00000489451 LINC01547P58512 204 aaPredicted RBP6.64□□□□□ -1.35
ACTN4-206ENST00000489451 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
ACTN4-206ENST00000489451 Q6ZRX8 168 aa6.64□□□□□ -1.35
ACTN4-206ENST00000489451 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
ACTN4-206ENST00000489451 HSBP1L1C9JCN9 74 aa6.63□□□□□ -1.35
ACTN4-206ENST00000489451 Q6ZVH6 145 aa6.63□□□□□ -1.35
ACTN4-206ENST00000489451 HIST3H2BBQ8N257 126 aa6.63□□□□□ -1.35
ACTN4-206ENST00000489451 HIST1H2BLQ99880 126 aa6.63□□□□□ -1.35
ACTN4-206ENST00000489451 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
ACTN4-206ENST00000489451 IFITM1P13164 125 aa6.62□□□□□ -1.35
ACTN4-206ENST00000489451 ANKRD39Q53RE8 183 aa6.62□□□□□ -1.35
ACTN4-206ENST00000489451 GAGE2AQ6NT46 116 aa6.62□□□□□ -1.35
ACTN4-206ENST00000489451 SPAG11AQ6PDA7 123 aa6.62□□□□□ -1.35
ACTN4-206ENST00000489451 Q8NBF4 154 aa6.62□□□□□ -1.35
ACTN4-206ENST00000489451 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
ACTN4-206ENST00000489451 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
ACTN4-206ENST00000489451 C5orf52A6NGY3 159 aa6.59□□□□□ -1.35
ACTN4-206ENST00000489451 ERC2-IT1O76042 136 aa6.59□□□□□ -1.35
ACTN4-206ENST00000489451 ASB16-AS1Q495Z4 193 aa6.59□□□□□ -1.35
ACTN4-206ENST00000489451 PCP2Q8IVA1 136 aa6.59□□□□□ -1.35
ACTN4-206ENST00000489451 Q9BRP9 147 aa6.59□□□□□ -1.35
ACTN4-206ENST00000489451 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
ACTN4-206ENST00000489451 A6NDN8 102 aa6.57□□□□□ -1.36
ACTN4-206ENST00000489451 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
ACTN4-206ENST00000489451 IGLV9-49A0A0B4J1Y8 123 aa6.56□□□□□ -1.36
ACTN4-206ENST00000489451 COX7BP24311 80 aa6.56□□□□□ -1.36
ACTN4-206ENST00000489451 SLC25A34Q6PIV7 304 aa6.56□□□□□ -1.36
ACTN4-206ENST00000489451 SSBP3-AS1Q7Z2R9 100 aa6.56□□□□□ -1.36
ACTN4-206ENST00000489451 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
ACTN4-206ENST00000489451 Q8N377 158 aa6.56□□□□□ -1.36
ACTN4-206ENST00000489451 TRAV13-2A0A0B4J235 113 aa6.55□□□□□ -1.36
ACTN4-206ENST00000489451 SPINK1P00995 79 aa6.55□□□□□ -1.36
ACTN4-206ENST00000489451 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
ACTN4-206ENST00000489451 TRBV7-6A0A0J9YX20 115 aa6.54□□□□□ -1.36
ACTN4-206ENST00000489451 MOBPQ13875 183 aa6.54□□□□□ -1.36
ACTN4-206ENST00000489451 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
ACTN4-206ENST00000489451 C9orf153Q5TBE3 101 aa6.53□□□□□ -1.36
ACTN4-206ENST00000489451 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
ACTN4-206ENST00000489451 ST20-AS1Q8NBB2 130 aa6.52□□□□□ -1.37
ACTN4-206ENST00000489451 A4D1N5 150 aa6.51□□□□□ -1.37
ACTN4-206ENST00000489451 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
ACTN4-206ENST00000489451 TAL2Q16559 108 aa6.51□□□□□ -1.37
ACTN4-206ENST00000489451 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
ACTN4-206ENST00000489451 LAMTOR3Q9UHA4 124 aa6.51□□□□□ -1.37
ACTN4-206ENST00000489451 VAMP3Q15836 100 aa6.5□□□□□ -1.37
ACTN4-206ENST00000489451 XP32Q5T750 250 aa6.5□□□□□ -1.37
ACTN4-206ENST00000489451 NHP2Q9NX24 153 aaKnown RBP6.5□□□□□ -1.37
ACTN4-206ENST00000489451 SPRR1BP22528 89 aa6.49□□□□□ -1.37
ACTN4-206ENST00000489451 TEX49A0A1B0GTD5 131 aa6.48□□□□□ -1.37
ACTN4-206ENST00000489451 SLC25A20O43772 301 aa6.48□□□□□ -1.37
ACTN4-206ENST00000489451 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
ACTN4-206ENST00000489451 DEFB105AQ8NG35 78 aa6.48□□□□□ -1.37
ACTN4-206ENST00000489451 HIST1H4GQ99525 98 aa6.48□□□□□ -1.37
ACTN4-206ENST00000489451 COX8AP10176 69 aa6.47□□□□□ -1.37
ACTN4-206ENST00000489451 SMIM11BQ8TCY0 68 aa6.47□□□□□ -1.37
ACTN4-206ENST00000489451 DLEU1O43261 78 aa6.46□□□□□ -1.38
ACTN4-206ENST00000489451 TMA7Q9Y2S6 64 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms