RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 SPINK1P00995 79 aa10.95□□□□□ -0.66
CD55-209ENST00000488171 S100A7L2Q5SY68 101 aa10.95□□□□□ -0.66
CD55-209ENST00000488171 NPC2P61916 151 aa10.94□□□□□ -0.66
CD55-209ENST00000488171 MOBPQ13875 183 aa10.93□□□□□ -0.66
CD55-209ENST00000488171 TRAV23DV6A0A075B6W5 121 aa10.92□□□□□ -0.66
CD55-209ENST00000488171 IGLV9-49A0A0B4J1Y8 123 aa10.92□□□□□ -0.66
CD55-209ENST00000488171 SYS1-DBNDD2H3BUS1 97 aa10.92□□□□□ -0.66
CD55-209ENST00000488171 FAT4Q6V0I7 4981 aa10.91□□□□□ -0.66
CD55-209ENST00000488171 HIST1H2BKO60814 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST1H2BJP06899 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST1H2BOP23527 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST1H2BBP33778 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST1H2BDP58876 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST1H2BCP62807 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST2H2BEQ16778 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST1H2BHQ93079 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST1H2BNQ99877 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 HIST1H2BMQ99879 126 aa10.9□□□□□ -0.66
CD55-209ENST00000488171 ZNF73O43830 326 aaPredicted RBP10.9□□□□□ -0.67
CD55-209ENST00000488171 KRTAP13-3Q3SY46 172 aa10.9□□□□□ -0.67
CD55-209ENST00000488171 SSBP3-AS1Q7Z2R9 100 aa10.9□□□□□ -0.67
CD55-209ENST00000488171 LITAFQ99732 161 aa10.9□□□□□ -0.67
CD55-209ENST00000488171 JOSD1Q15040 202 aaPredicted RBP10.88□□□□□ -0.67
CD55-209ENST00000488171 LINC01545Q5VT33 79 aa10.88□□□□□ -0.67
CD55-209ENST00000488171 RPS29P62273 56 aaKnown RBP10.87□□□□□ -0.67
CD55-209ENST00000488171 Q8N377 158 aa10.87□□□□□ -0.67
CD55-209ENST00000488171 LINC00308Q8TCZ7 52 aa10.86□□□□□ -0.67
CD55-209ENST00000488171 ST20-AS1Q8NBB2 130 aa10.85□□□□□ -0.67
CD55-209ENST00000488171 TIMM17BO60830 172 aa10.84□□□□□ -0.67
CD55-209ENST00000488171 PET117Q6UWS5 81 aa10.84□□□□□ -0.67
CD55-209ENST00000488171 SPANXCQ9NY87 97 aa10.84□□□□□ -0.67
CD55-209ENST00000488171 TTTY13Q9BZ97 58 aa10.82□□□□□ -0.68
CD55-209ENST00000488171 CBY1Q9Y3M2 126 aa10.82□□□□□ -0.68
CD55-209ENST00000488171 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
CD55-209ENST00000488171 C5orf52A6NGY3 159 aa10.8□□□□□ -0.68
CD55-209ENST00000488171 C9orf153Q5TBE3 101 aa10.8□□□□□ -0.68
CD55-209ENST00000488171 OR13C6PQ8NH95 151 aa10.8□□□□□ -0.68
CD55-209ENST00000488171 SLC25A20O43772 301 aa10.79□□□□□ -0.68
CD55-209ENST00000488171 C3orf79P0CE67 100 aa10.79□□□□□ -0.68
CD55-209ENST00000488171 HINT1P49773 126 aaPredicted RBP10.79□□□□□ -0.68
CD55-209ENST00000488171 ASB16-AS1Q495Z4 193 aa10.79□□□□□ -0.68
CD55-209ENST00000488171 SPANXDQ9BXN6 97 aa10.77□□□□□ -0.68
CD55-209ENST00000488171 SPRR1BP22528 89 aa10.76□□□□□ -0.69
CD55-209ENST00000488171 COA6Q5JTJ3 125 aaKnown RBP10.75□□□□□ -0.69
CD55-209ENST00000488171 DHRS4-AS1Q9P1J3 65 aa10.75□□□□□ -0.69
CD55-209ENST00000488171 KRTDAPP60985 99 aa10.74□□□□□ -0.69
CD55-209ENST00000488171 ELOF1P60002 83 aaKnown RBP10.73□□□□□ -0.69
CD55-209ENST00000488171 LINC00518Q8N0U6 118 aa10.73□□□□□ -0.69
CD55-209ENST00000488171 KRTAP9-2Q9BYQ4 174 aa10.73□□□□□ -0.69
CD55-209ENST00000488171 KRTAP4-1Q9BYQ7 146 aa10.73□□□□□ -0.69
CD55-209ENST00000488171 C6orf99Q4VX62 202 aa10.72□□□□□ -0.69
CD55-209ENST00000488171 A6NJY4 79 aa10.71□□□□□ -0.69
CD55-209ENST00000488171 COX7BP24311 80 aa10.71□□□□□ -0.69
CD55-209ENST00000488171 SEC61BP60468 96 aaKnown RBP10.7□□□□□ -0.7
CD55-209ENST00000488171 SLC25A34Q6PIV7 304 aa10.7□□□□□ -0.7
CD55-209ENST00000488171 ANKRD39Q53RE8 183 aa10.69□□□□□ -0.7
CD55-209ENST00000488171 XP32Q5T750 250 aa10.68□□□□□ -0.7
CD55-209ENST00000488171 SCGB1D4Q6XE38 83 aa10.68□□□□□ -0.7
CD55-209ENST00000488171 LAMTOR3Q9UHA4 124 aa10.67□□□□□ -0.7
CD55-209ENST00000488171 HRCT1Q6UXD1 115 aa10.66□□□□□ -0.7
CD55-209ENST00000488171 C20orf202A1L168 122 aa10.65□□□□□ -0.7
CD55-209ENST00000488171 ATOH7Q8N100 152 aa10.65□□□□□ -0.7
CD55-209ENST00000488171 TRBV7-6A0A0J9YX20 115 aa10.65□□□□□ -0.71
CD55-209ENST00000488171 IFITM1P13164 125 aa10.64□□□□□ -0.71
CD55-209ENST00000488171 TAL2Q16559 108 aa10.64□□□□□ -0.71
CD55-209ENST00000488171 DEFB105AQ8NG35 78 aa10.64□□□□□ -0.71
CD55-209ENST00000488171 LIMD2Q9BT23 127 aa10.64□□□□□ -0.71
CD55-209ENST00000488171 Q1RN00 199 aa10.63□□□□□ -0.71
CD55-209ENST00000488171 PCP2Q8IVA1 136 aa10.63□□□□□ -0.71
CD55-209ENST00000488171 COPS9Q8WXC6 57 aa10.63□□□□□ -0.71
CD55-209ENST00000488171 Q6ZVH6 145 aa10.62□□□□□ -0.71
CD55-209ENST00000488171 TEX49A0A1B0GTD5 131 aa10.61□□□□□ -0.71
CD55-209ENST00000488171 A0A1B0GWB2 263 aa10.61□□□□□ -0.71
CD55-209ENST00000488171 MUSTN1Q8IVN3 82 aa10.61□□□□□ -0.71
CD55-209ENST00000488171 A6NDN8 102 aa10.6□□□□□ -0.71
CD55-209ENST00000488171 SMIM29Q86T20 159 aa10.6□□□□□ -0.71
CD55-209ENST00000488171 LINC01547P58512 204 aaPredicted RBP10.59□□□□□ -0.71
CD55-209ENST00000488171 CD164Q04900 197 aa10.59□□□□□ -0.71
CD55-209ENST00000488171 PRO1933Q9H354 126 aa10.58□□□□□ -0.72
CD55-209ENST00000488171 IGLV5-48A0A075B6I7 105 aa10.57□□□□□ -0.72
CD55-209ENST00000488171 AKR1D1P51857 326 aa10.56□□□□□ -0.72
CD55-209ENST00000488171 A4D1N5 150 aa10.53□□□□□ -0.72
CD55-209ENST00000488171 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
CD55-209ENST00000488171 H7C2G1 150 aa10.53□□□□□ -0.72
CD55-209ENST00000488171 SMIM11BQ8TCY0 68 aa10.53□□□□□ -0.72
CD55-209ENST00000488171 TRAV13-2A0A0B4J235 113 aa10.52□□□□□ -0.72
CD55-209ENST00000488171 A0A0G2JQZ4 141 aa10.52□□□□□ -0.72
CD55-209ENST00000488171 SNRPEP62304 92 aaKnown RBP10.52□□□□□ -0.72
CD55-209ENST00000488171 Q5XG85 94 aa10.52□□□□□ -0.73
CD55-209ENST00000488171 HIST3H2BBQ8N257 126 aa10.5□□□□□ -0.73
CD55-209ENST00000488171 PCOTHQ58A44 107 aa10.49□□□□□ -0.73
CD55-209ENST00000488171 HIST1H2BLQ99880 126 aa10.49□□□□□ -0.73
CD55-209ENST00000488171 NHP2Q9NX24 153 aaKnown RBP10.49□□□□□ -0.73
CD55-209ENST00000488171 C1orf195Q5TG92 126 aa10.48□□□□□ -0.73
CD55-209ENST00000488171 KRTAP19-2Q3LHN2 52 aa10.45□□□□□ -0.74
CD55-209ENST00000488171 S100A1P23297 94 aa10.43□□□□□ -0.74
CD55-209ENST00000488171 S100A2P29034 98 aa10.43□□□□□ -0.74
CD55-209ENST00000488171 LINC00575Q6W349 94 aa10.43□□□□□ -0.74
CD55-209ENST00000488171 IGLV8-61A0A075B6I0 122 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms