RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ATOH7Q8N100 152 aa13.77□□□□□ -0.21
RNF38-208ENST00000488058 RETNLBQ9BQ08 111 aa13.76□□□□□ -0.21
RNF38-208ENST00000488058 ERC2-IT1O76042 136 aa13.75□□□□□ -0.21
RNF38-208ENST00000488058 GAGE2AQ6NT46 116 aa13.75□□□□□ -0.21
RNF38-208ENST00000488058 Q6ZRX8 168 aa13.75□□□□□ -0.21
RNF38-208ENST00000488058 SPANXCQ9NY87 97 aa13.75□□□□□ -0.21
RNF38-208ENST00000488058 OR13C6PQ8NH95 151 aa13.74□□□□□ -0.21
RNF38-208ENST00000488058 Q9BRP9 147 aa13.74□□□□□ -0.21
RNF38-208ENST00000488058 S100A1P23297 94 aa13.73□□□□□ -0.21
RNF38-208ENST00000488058 ANKRD39Q53RE8 183 aa13.73□□□□□ -0.21
RNF38-208ENST00000488058 SCGB1D4Q6XE38 83 aa13.73□□□□□ -0.21
RNF38-208ENST00000488058 ZNF73O43830 326 aaPredicted RBP13.72□□□□□ -0.21
RNF38-208ENST00000488058 JOSD1Q15040 202 aaPredicted RBP13.7□□□□□ -0.22
RNF38-208ENST00000488058 CBY1Q9Y3M2 126 aa13.7□□□□□ -0.22
RNF38-208ENST00000488058 LINC00483Q53H64 154 aa13.69□□□□□ -0.22
RNF38-208ENST00000488058 HINT1P49773 126 aaPredicted RBP13.68□□□□□ -0.22
RNF38-208ENST00000488058 C4orf48Q5BLP8 95 aa13.68□□□□□ -0.22
RNF38-208ENST00000488058 Q8NBF4 154 aa13.68□□□□□ -0.22
RNF38-208ENST00000488058 S100A2P29034 98 aa13.67□□□□□ -0.22
RNF38-208ENST00000488058 SPAG11AQ6PDA7 123 aa13.67□□□□□ -0.22
RNF38-208ENST00000488058 RNF213Q63HN8 5207 aa13.66□□□□□ -0.22
RNF38-208ENST00000488058 IGLV9-49A0A0B4J1Y8 123 aa13.66□□□□□ -0.22
RNF38-208ENST00000488058 AKR1D1P51857 326 aa13.66□□□□□ -0.22
RNF38-208ENST00000488058 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
RNF38-208ENST00000488058 SPANXDQ9BXN6 97 aa13.65□□□□□ -0.22
RNF38-208ENST00000488058 CTAG1AP78358 180 aa13.64□□□□□ -0.23
RNF38-208ENST00000488058 MOBPQ13875 183 aa13.64□□□□□ -0.23
RNF38-208ENST00000488058 PCP2Q8IVA1 136 aa13.64□□□□□ -0.23
RNF38-208ENST00000488058 LINC00518Q8N0U6 118 aa13.63□□□□□ -0.23
RNF38-208ENST00000488058 HIST1H2BLQ99880 126 aa13.62□□□□□ -0.23
RNF38-208ENST00000488058 S100A6P06703 90 aa13.61□□□□□ -0.23
RNF38-208ENST00000488058 ST20-AS1Q8NBB2 130 aa13.6□□□□□ -0.23
RNF38-208ENST00000488058 COPS9Q8WXC6 57 aa13.6□□□□□ -0.23
RNF38-208ENST00000488058 IGLV7-46A0A075B6I9 117 aa13.59□□□□□ -0.23
RNF38-208ENST00000488058 SNRPEP62304 92 aaKnown RBP13.58□□□□□ -0.24
RNF38-208ENST00000488058 IFITM1P13164 125 aa13.57□□□□□ -0.24
RNF38-208ENST00000488058 C6orf99Q4VX62 202 aa13.56□□□□□ -0.24
RNF38-208ENST00000488058 C9orf153Q5TBE3 101 aa13.56□□□□□ -0.24
RNF38-208ENST00000488058 MUSTN1Q8IVN3 82 aa13.56□□□□□ -0.24
RNF38-208ENST00000488058 COX7BP24311 80 aa13.55□□□□□ -0.24
RNF38-208ENST00000488058 Q6ZVH6 145 aa13.55□□□□□ -0.24
RNF38-208ENST00000488058 SSBP3-AS1Q7Z2R9 100 aa13.55□□□□□ -0.24
RNF38-208ENST00000488058 HSBP1L1C9JCN9 74 aa13.54□□□□□ -0.24
RNF38-208ENST00000488058 DHRS4-AS1Q9P1J3 65 aa13.54□□□□□ -0.24
RNF38-208ENST00000488058 A6NDN8 102 aa13.53□□□□□ -0.24
RNF38-208ENST00000488058 SPINK1P00995 79 aa13.53□□□□□ -0.24
RNF38-208ENST00000488058 ELOF1P60002 83 aaKnown RBP13.52□□□□□ -0.25
RNF38-208ENST00000488058 C5orf52A6NGY3 159 aa13.51□□□□□ -0.25
RNF38-208ENST00000488058 CDIP1Q9H305 208 aa13.51□□□□□ -0.25
RNF38-208ENST00000488058 TPRXLQ17RH7 258 aa13.49□□□□□ -0.25
RNF38-208ENST00000488058 FP248Q71RG6 208 aaPredicted RBP13.46□□□□□ -0.25
RNF38-208ENST00000488058 SCGB1D1O95968 90 aa13.45□□□□□ -0.26
RNF38-208ENST00000488058 SPRR1BP22528 89 aa13.44□□□□□ -0.26
RNF38-208ENST00000488058 TAL2Q16559 108 aa13.44□□□□□ -0.26
RNF38-208ENST00000488058 SLC25A34Q6PIV7 304 aa13.44□□□□□ -0.26
RNF38-208ENST00000488058 DEFB105AQ8NG35 78 aa13.44□□□□□ -0.26
RNF38-208ENST00000488058 TRAV13-2A0A0B4J235 113 aa13.43□□□□□ -0.26
RNF38-208ENST00000488058 TRBV7-6A0A0J9YX20 115 aa13.42□□□□□ -0.26
RNF38-208ENST00000488058 A0A1B0GWB2 263 aa13.42□□□□□ -0.26
RNF38-208ENST00000488058 LAMTOR3Q9UHA4 124 aa13.42□□□□□ -0.26
RNF38-208ENST00000488058 RPS29P62273 56 aaKnown RBP13.41□□□□□ -0.26
RNF38-208ENST00000488058 Q8N377 158 aa13.4□□□□□ -0.26
RNF38-208ENST00000488058 Q1RN00 199 aa13.38□□□□□ -0.27
RNF38-208ENST00000488058 SMIM11BQ8TCY0 68 aa13.38□□□□□ -0.27
RNF38-208ENST00000488058 SLC25A20O43772 301 aa13.37□□□□□ -0.27
RNF38-208ENST00000488058 HRCT1Q6UXD1 115 aa13.36□□□□□ -0.27
RNF38-208ENST00000488058 TEX49A0A1B0GTD5 131 aa13.35□□□□□ -0.27
RNF38-208ENST00000488058 A4D1N5 150 aa13.35□□□□□ -0.27
RNF38-208ENST00000488058 KRTAP13-3Q3SY46 172 aa13.32□□□□□ -0.28
RNF38-208ENST00000488058 HIST1H4GQ99525 98 aa13.31□□□□□ -0.28
RNF38-208ENST00000488058 NHP2Q9NX24 153 aaKnown RBP13.31□□□□□ -0.28
RNF38-208ENST00000488058 COX8AP10176 69 aa13.3□□□□□ -0.28
RNF38-208ENST00000488058 VAMP3Q15836 100 aa13.29□□□□□ -0.28
RNF38-208ENST00000488058 C12orf57Q99622 126 aa13.29□□□□□ -0.28
RNF38-208ENST00000488058 LINC01547P58512 204 aaPredicted RBP13.28□□□□□ -0.28
RNF38-208ENST00000488058 PRO1933Q9H354 126 aa13.28□□□□□ -0.28
RNF38-208ENST00000488058 IGLV5-48A0A075B6I7 105 aa13.27□□□□□ -0.29
RNF38-208ENST00000488058 LIMD2Q9BT23 127 aa13.27□□□□□ -0.29
RNF38-208ENST00000488058 A0A0U1RQV1 116 aa13.26□□□□□ -0.29
RNF38-208ENST00000488058 SMIM29Q86T20 159 aa13.26□□□□□ -0.29
RNF38-208ENST00000488058 PAM16Q9Y3D7 125 aa13.25□□□□□ -0.29
RNF38-208ENST00000488058 C14orf144Q96I85 54 aa13.24□□□□□ -0.29
RNF38-208ENST00000488058 MUC2Q02817 5179 aa13.22□□□□□ -0.29
RNF38-208ENST00000488058 DLEU1O43261 78 aa13.22□□□□□ -0.29
RNF38-208ENST00000488058 SPATA45Q537H7 98 aa13.22□□□□□ -0.29
RNF38-208ENST00000488058 H7C2G1 150 aa13.21□□□□□ -0.29
RNF38-208ENST00000488058 LINC00575Q6W349 94 aa13.21□□□□□ -0.29
RNF38-208ENST00000488058 MUC17Q685J3 4493 aa13.21□□□□□ -0.29
RNF38-208ENST00000488058 VAMP8Q9BV40 100 aa13.2□□□□□ -0.3
RNF38-208ENST00000488058 A0A0G2JQZ4 141 aa13.19□□□□□ -0.3
RNF38-208ENST00000488058 CD164Q04900 197 aa13.19□□□□□ -0.3
RNF38-208ENST00000488058 hADV29S1A0JD25 119 aa13.18□□□□□ -0.3
RNF38-208ENST00000488058 Q6ZQY7 126 aa13.17□□□□□ -0.3
RNF38-208ENST00000488058 F8WEM9 126 aa13.15□□□□□ -0.3
RNF38-208ENST00000488058 BVES-AS1Q5T3Y7 98 aa13.13□□□□□ -0.31
RNF38-208ENST00000488058 RAB37Q96AX2 223 aa13.13□□□□□ -0.31
RNF38-208ENST00000488058 HIGD1BQ9P298 99 aa13.13□□□□□ -0.31
RNF38-208ENST00000488058 ASB16-AS1Q495Z4 193 aa13.12□□□□□ -0.31
RNF38-208ENST00000488058 CFC1BP0CG36 223 aa13.11□□□□□ -0.31
RNF38-208ENST00000488058 CFC1P0CG37 223 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms